RNA–Protein interactions for RNA: ENST00000485476.2

LDLRAP1-206, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 5

Gene LDLRAP1, Length 238 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-206ENST00000485476 TBX22Q9Y458 520 aa18.5■□□□□ 0.55
LDLRAP1-206ENST00000485476 PLEKHG1Q9ULL1 1385 aa18.5■□□□□ 0.55
LDLRAP1-206ENST00000485476 XIRP1Q702N8 1843 aaKnown RBP18.49■□□□□ 0.55
LDLRAP1-206ENST00000485476 MSH6P52701 1360 aa18.49■□□□□ 0.55
LDLRAP1-206ENST00000485476 NWD1Q149M9 1564 aa18.48■□□□□ 0.55
LDLRAP1-206ENST00000485476 SENP3Q9H4L4 574 aaPredicted RBP18.48■□□□□ 0.55
LDLRAP1-206ENST00000485476 ZFYVE9O95405 1425 aa18.48■□□□□ 0.55
LDLRAP1-206ENST00000485476 SLAIN2Q9P270 581 aa18.47■□□□□ 0.55
LDLRAP1-206ENST00000485476 BCANQ96GW7 911 aa18.46■□□□□ 0.55
LDLRAP1-206ENST00000485476 FAM50AQ14320 339 aaKnown RBP18.45■□□□□ 0.54
LDLRAP1-206ENST00000485476 PIK3R4Q99570 1358 aa18.44■□□□□ 0.54
LDLRAP1-206ENST00000485476 RIMS2Q9UQ26 1411 aa18.44■□□□□ 0.54
LDLRAP1-206ENST00000485476 PPP1R15AO75807 674 aaPredicted RBP18.44■□□□□ 0.54
LDLRAP1-206ENST00000485476 ROCK1Q13464 1354 aa18.42■□□□□ 0.54
LDLRAP1-206ENST00000485476 JCADQ9P266 1359 aa18.42■□□□□ 0.54
LDLRAP1-206ENST00000485476 ROBO1Q9Y6N7 1651 aa18.41■□□□□ 0.54
LDLRAP1-206ENST00000485476 POTEAQ6S8J7 498 aa18.4■□□□□ 0.54
LDLRAP1-206ENST00000485476 CADPS2Q86UW7 1296 aa18.4■□□□□ 0.54
LDLRAP1-206ENST00000485476 RBM33Q96EV2 1170 aaKnown RBP18.38■□□□□ 0.53
LDLRAP1-206ENST00000485476 C19orf44Q9H6X5 657 aa18.38■□□□□ 0.53
LDLRAP1-206ENST00000485476 TMEM131LA2VDJ0 1609 aa18.38■□□□□ 0.53
LDLRAP1-206ENST00000485476 DIP2AQ14689 1571 aa18.36■□□□□ 0.53
LDLRAP1-206ENST00000485476 SPATA31A6Q5VVP1 1343 aa18.36■□□□□ 0.53
LDLRAP1-206ENST00000485476 CHD2O14647 1828 aaKnown RBP18.35■□□□□ 0.53
LDLRAP1-206ENST00000485476 UNC13BO14795 1591 aa18.34■□□□□ 0.53
LDLRAP1-206ENST00000485476 ADAMTS13Q76LX8 1427 aa18.34■□□□□ 0.53
LDLRAP1-206ENST00000485476 GCC2Q8IWJ2 1684 aa18.34■□□□□ 0.53
LDLRAP1-206ENST00000485476 CHGAP10645 457 aaKnown RBP18.33■□□□□ 0.52
LDLRAP1-206ENST00000485476 ATF3P18847 181 aa18.33■□□□□ 0.52
LDLRAP1-206ENST00000485476 C14orf37Q86TY3 774 aa18.32■□□□□ 0.52
LDLRAP1-206ENST00000485476 NUP155O75694 1391 aa18.3■□□□□ 0.52
LDLRAP1-206ENST00000485476 ZNF772Q68DY9 489 aaPredicted RBP18.3■□□□□ 0.52
LDLRAP1-206ENST00000485476 DCCP43146 1447 aa18.29■□□□□ 0.52
LDLRAP1-206ENST00000485476 PHLPP1O60346 1717 aa18.29■□□□□ 0.52
LDLRAP1-206ENST00000485476 IQGAP3Q86VI3 1631 aa18.28■□□□□ 0.52
LDLRAP1-206ENST00000485476 AMOTL2Q9Y2J4 779 aa18.28■□□□□ 0.52
LDLRAP1-206ENST00000485476 TRPM2O94759 1503 aa18.27■□□□□ 0.51
LDLRAP1-206ENST00000485476 AHDC1Q5TGY3 1603 aaPredicted RBP18.27■□□□□ 0.51
LDLRAP1-206ENST00000485476 COL16A1Q07092 1604 aaPredicted RBP18.26■□□□□ 0.51
LDLRAP1-206ENST00000485476 E9PCH4 1651 aa18.25■□□□□ 0.51
LDLRAP1-206ENST00000485476 MYO5BQ9ULV0 1848 aa18.25■□□□□ 0.51
LDLRAP1-206ENST00000485476 MEX3CQ5U5Q3 659 aaKnown RBP18.23■□□□□ 0.51
LDLRAP1-206ENST00000485476 NUTM2DQ5VT03 806 aaPredicted RBP18.23■□□□□ 0.51
LDLRAP1-206ENST00000485476 BRINP3Q76B58 766 aa18.23■□□□□ 0.51
LDLRAP1-206ENST00000485476 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.22■□□□□ 0.51
LDLRAP1-206ENST00000485476 PTPRUQ92729 1446 aa18.22■□□□□ 0.51
LDLRAP1-206ENST00000485476 SETBP1Q9Y6X0 1596 aa18.21■□□□□ 0.51
LDLRAP1-206ENST00000485476 SETD5Q9C0A6 1442 aa18.2■□□□□ 0.5
LDLRAP1-206ENST00000485476 LRRC59Q96AG4 307 aaKnown RBP18.19■□□□□ 0.5
LDLRAP1-206ENST00000485476 LRP6O75581 1613 aa18.18■□□□□ 0.5
LDLRAP1-206ENST00000485476 SHPRHQ149N8 1683 aa18.18■□□□□ 0.5
LDLRAP1-206ENST00000485476 RXRBP28702 533 aa18.17■□□□□ 0.5
LDLRAP1-206ENST00000485476 ZNF326Q5BKZ1 582 aaKnown RBP18.17■□□□□ 0.5
LDLRAP1-206ENST00000485476 CDK12Q9NYV4 1490 aaPredicted RBP18.16■□□□□ 0.5
LDLRAP1-206ENST00000485476 MST1RQ04912 1400 aa18.15■□□□□ 0.5
LDLRAP1-206ENST00000485476 UPF1Q92900 1129 aaKnown RBP eCLIP18.14■□□□□ 0.49
LDLRAP1-206ENST00000485476 XRN1Q8IZH2 1706 aaKnown RBP18.14■□□□□ 0.49
LDLRAP1-206ENST00000485476 METP08581 1390 aa18.14■□□□□ 0.49
LDLRAP1-206ENST00000485476 ASXL1Q8IXJ9 1541 aa18.13■□□□□ 0.49
LDLRAP1-206ENST00000485476 ITGAEP38570 1179 aa18.13■□□□□ 0.49
LDLRAP1-206ENST00000485476 ADGRL3Q9HAR2 1447 aa18.13■□□□□ 0.49
LDLRAP1-206ENST00000485476 VGFO15240 615 aaPredicted RBP18.12■□□□□ 0.49
LDLRAP1-206ENST00000485476 RPGRIP1LQ68CZ1 1315 aa18.12■□□□□ 0.49
LDLRAP1-206ENST00000485476 NRXN3Q9Y4C0 1643 aa18.12■□□□□ 0.49
LDLRAP1-206ENST00000485476 SPHKAPQ2M3C7 1700 aa18.09■□□□□ 0.49
LDLRAP1-206ENST00000485476 PRAG1Q86YV5 1406 aa18.09■□□□□ 0.49
LDLRAP1-206ENST00000485476 AFF2P51816 1311 aa18.09■□□□□ 0.49
LDLRAP1-206ENST00000485476 NUTM2BA6NNL0 878 aaPredicted RBP18.09■□□□□ 0.49
LDLRAP1-206ENST00000485476 NUTM2EB1AL46 878 aaPredicted RBP18.09■□□□□ 0.49
LDLRAP1-206ENST00000485476 NUTM2AQ8IVF1 878 aaPredicted RBP18.09■□□□□ 0.49
LDLRAP1-206ENST00000485476 TRIM52Q96A61 297 aa18.08■□□□□ 0.48
LDLRAP1-206ENST00000485476 PTCH1Q13635 1447 aa18.07■□□□□ 0.48
LDLRAP1-206ENST00000485476 RBM6P78332 1123 aaKnown RBP18.07■□□□□ 0.48
LDLRAP1-206ENST00000485476 NEXMIFQ5QGS0 1516 aa18.07■□□□□ 0.48
LDLRAP1-206ENST00000485476 PNPLA6Q8IY17 1366 aa18.06■□□□□ 0.48
LDLRAP1-206ENST00000485476 NHSL1Q5SYE7 1610 aa18.06■□□□□ 0.48
LDLRAP1-206ENST00000485476 RRBP1Q9P2E9 1410 aaKnown RBP18.06■□□□□ 0.48
LDLRAP1-206ENST00000485476 QTRT2Q9H974 415 aaKnown RBP18.05■□□□□ 0.48
LDLRAP1-206ENST00000485476 C1orf167Q5SNV9 1468 aa18.05■□□□□ 0.48
LDLRAP1-206ENST00000485476 NAIPQ13075 1403 aa18.05■□□□□ 0.48
LDLRAP1-206ENST00000485476 SETD1AO15047 1707 aaKnown RBP18.03■□□□□ 0.48
LDLRAP1-206ENST00000485476 SOS2Q07890 1332 aaPredicted RBP18.03■□□□□ 0.48
LDLRAP1-206ENST00000485476 NGLY1Q96IV0 654 aa18.03■□□□□ 0.48
LDLRAP1-206ENST00000485476 HFM1A2PYH4 1435 aa18.02■□□□□ 0.48
LDLRAP1-206ENST00000485476 CLTCL1P53675 1640 aa18.01■□□□□ 0.47
LDLRAP1-206ENST00000485476 C8orf37Q96NL8 207 aa18.01■□□□□ 0.47
LDLRAP1-206ENST00000485476 LAMC1P11047 1609 aa18.01■□□□□ 0.47
LDLRAP1-206ENST00000485476 ROBO2Q9HCK4 1378 aa17.99■□□□□ 0.47
LDLRAP1-206ENST00000485476 FNBP4Q8N3X1 1017 aaPredicted RBP17.98■□□□□ 0.47
LDLRAP1-206ENST00000485476 DDX17Q92841 729 aaKnown RBP17.97■□□□□ 0.47
LDLRAP1-206ENST00000485476 SLC4A1APQ9BWU0 796 aaKnown RBP17.97■□□□□ 0.47
LDLRAP1-206ENST00000485476 KIF1BO60333 1816 aa17.97■□□□□ 0.47
LDLRAP1-206ENST00000485476 FOXD1Q16676 465 aa17.96■□□□□ 0.47
LDLRAP1-206ENST00000485476 ORAI2Q96SN7 254 aa17.96■□□□□ 0.47
LDLRAP1-206ENST00000485476 TRPC5Q9UL62 973 aaPredicted RBP17.96■□□□□ 0.47
LDLRAP1-206ENST00000485476 NPHP3Q7Z494 1330 aa17.96■□□□□ 0.46
LDLRAP1-206ENST00000485476 NALCNQ8IZF0 1738 aa17.95■□□□□ 0.46
LDLRAP1-206ENST00000485476 PPARGC1BQ86YN6 1023 aaKnown RBP17.94■□□□□ 0.46
LDLRAP1-206ENST00000485476 RGS12O14924 1447 aa17.94■□□□□ 0.46
LDLRAP1-206ENST00000485476 ACIN1Q9UKV3 1341 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms