RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 SCAF1Q9H7N4 1312 aaKnown RBP15.95■□□□□ 0.14
DDX56-212ENST00000485367 TMEM131LA2VDJ0 1609 aa15.95■□□□□ 0.14
DDX56-212ENST00000485367 TOM1O60784 492 aa15.95■□□□□ 0.14
DDX56-212ENST00000485367 PIP4K2BP78356 416 aa15.95■□□□□ 0.14
DDX56-212ENST00000485367 SLC26A8Q96RN1 970 aa15.95■□□□□ 0.14
DDX56-212ENST00000485367 LRRC7Q96NW7 1537 aa15.94■□□□□ 0.14
DDX56-212ENST00000485367 RIMS2Q9UQ26 1411 aa15.93■□□□□ 0.14
DDX56-212ENST00000485367 PPP1R15AO75807 674 aaPredicted RBP15.93■□□□□ 0.14
DDX56-212ENST00000485367 HDGFP51858 240 aaKnown RBP15.92■□□□□ 0.14
DDX56-212ENST00000485367 TRIM52Q96A61 297 aa15.92■□□□□ 0.14
DDX56-212ENST00000485367 ZFYVE9O95405 1425 aa15.91■□□□□ 0.14
DDX56-212ENST00000485367 HFM1A2PYH4 1435 aa15.91■□□□□ 0.14
DDX56-212ENST00000485367 SPHKAPQ2M3C7 1700 aa15.9■□□□□ 0.14
DDX56-212ENST00000485367 NUTM2DQ5VT03 806 aaPredicted RBP15.9■□□□□ 0.14
DDX56-212ENST00000485367 KCNA6P17658 529 aa15.89■□□□□ 0.13
DDX56-212ENST00000485367 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.89■□□□□ 0.13
DDX56-212ENST00000485367 PLEKHG1Q9ULL1 1385 aa15.89■□□□□ 0.13
DDX56-212ENST00000485367 XIRP1Q702N8 1843 aaKnown RBP15.86■□□□□ 0.13
DDX56-212ENST00000485367 ALKQ9UM73 1620 aa15.86■□□□□ 0.13
DDX56-212ENST00000485367 HSPA1LP34931 641 aa15.85■□□□□ 0.13
DDX56-212ENST00000485367 PROSER2Q86WR7 435 aaPredicted RBP15.85■□□□□ 0.13
DDX56-212ENST00000485367 ZNF326Q5BKZ1 582 aaKnown RBP15.85■□□□□ 0.13
DDX56-212ENST00000485367 TMEM94Q12767 1356 aa15.84■□□□□ 0.13
DDX56-212ENST00000485367 DISP3Q9P2K9 1392 aa15.84■□□□□ 0.13
DDX56-212ENST00000485367 RBM33Q96EV2 1170 aaKnown RBP15.84■□□□□ 0.13
DDX56-212ENST00000485367 SLC4A1APQ9BWU0 796 aaKnown RBP15.84■□□□□ 0.13
DDX56-212ENST00000485367 TBX22Q9Y458 520 aa15.83■□□□□ 0.12
DDX56-212ENST00000485367 CLTCL1P53675 1640 aa15.83■□□□□ 0.12
DDX56-212ENST00000485367 TRPM2O94759 1503 aa15.82■□□□□ 0.12
DDX56-212ENST00000485367 NWD1Q149M9 1564 aa15.82■□□□□ 0.12
DDX56-212ENST00000485367 CHD2O14647 1828 aaKnown RBP15.81■□□□□ 0.12
DDX56-212ENST00000485367 ADAMTS13Q76LX8 1427 aa15.8■□□□□ 0.12
DDX56-212ENST00000485367 NKTRP30414 1462 aaKnown RBP15.8■□□□□ 0.12
DDX56-212ENST00000485367 KIF1BO60333 1816 aa15.8■□□□□ 0.12
DDX56-212ENST00000485367 DIP2AQ14689 1571 aa15.78■□□□□ 0.12
DDX56-212ENST00000485367 FOXD1Q16676 465 aa15.77■□□□□ 0.12
DDX56-212ENST00000485367 MSH6P52701 1360 aa15.75■□□□□ 0.11
DDX56-212ENST00000485367 PIK3R4Q99570 1358 aa15.75■□□□□ 0.11
DDX56-212ENST00000485367 NEXMIFQ5QGS0 1516 aa15.75■□□□□ 0.11
DDX56-212ENST00000485367 C14orf37Q86TY3 774 aa15.75■□□□□ 0.11
DDX56-212ENST00000485367 MPHOSPH9Q99550 1183 aa15.75■□□□□ 0.11
DDX56-212ENST00000485367 AMOTL2Q9Y2J4 779 aa15.74■□□□□ 0.11
DDX56-212ENST00000485367 NRXN3Q9Y4C0 1643 aa15.74■□□□□ 0.11
DDX56-212ENST00000485367 SETBP1Q9Y6X0 1596 aa15.74■□□□□ 0.11
DDX56-212ENST00000485367 SETD5Q9C0A6 1442 aa15.73■□□□□ 0.11
DDX56-212ENST00000485367 PTPRUQ92729 1446 aa15.71■□□□□ 0.11
DDX56-212ENST00000485367 FAM135BQ49AJ0 1406 aa15.71■□□□□ 0.11
DDX56-212ENST00000485367 ACIN1Q9UKV3 1341 aaKnown RBP15.7■□□□□ 0.1
DDX56-212ENST00000485367 VGFO15240 615 aaPredicted RBP15.7■□□□□ 0.1
DDX56-212ENST00000485367 ILDR2Q71H61 639 aa15.7■□□□□ 0.1
DDX56-212ENST00000485367 SLAIN2Q9P270 581 aa15.7■□□□□ 0.1
DDX56-212ENST00000485367 METP08581 1390 aa15.69■□□□□ 0.1
DDX56-212ENST00000485367 RPGRIP1LQ68CZ1 1315 aa15.69■□□□□ 0.1
DDX56-212ENST00000485367 CCDC144AA2RUR9 1427 aa15.69■□□□□ 0.1
DDX56-212ENST00000485367 NCOA3Q9Y6Q9 1424 aa15.69■□□□□ 0.1
DDX56-212ENST00000485367 ROBO1Q9Y6N7 1651 aa15.69■□□□□ 0.1
DDX56-212ENST00000485367 MED1Q15648 1581 aaPredicted RBP15.68■□□□□ 0.1
DDX56-212ENST00000485367 C19orf44Q9H6X5 657 aa15.67■□□□□ 0.1
DDX56-212ENST00000485367 XRN1Q8IZH2 1706 aaKnown RBP15.67■□□□□ 0.1
DDX56-212ENST00000485367 ATF3P18847 181 aa15.67■□□□□ 0.1
DDX56-212ENST00000485367 RAB3GAP2Q9H2M9 1393 aa15.67■□□□□ 0.1
DDX56-212ENST00000485367 PPLO60437 1756 aa15.66■□□□□ 0.1
DDX56-212ENST00000485367 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.66■□□□□ 0.1
DDX56-212ENST00000485367 RGL3Q3MIN7 710 aa15.66■□□□□ 0.1
DDX56-212ENST00000485367 CADPS2Q86UW7 1296 aa15.65■□□□□ 0.1
DDX56-212ENST00000485367 SPATA31E1Q6ZUB1 1445 aa15.62■□□□□ 0.09
DDX56-212ENST00000485367 CENPBP07199 599 aaPredicted RBP15.62■□□□□ 0.09
DDX56-212ENST00000485367 PHF23Q9BUL5 403 aaPredicted RBP15.62■□□□□ 0.09
DDX56-212ENST00000485367 SETD1AO15047 1707 aaKnown RBP15.61■□□□□ 0.09
DDX56-212ENST00000485367 ADGRF5Q8IZF2 1346 aa15.61■□□□□ 0.09
DDX56-212ENST00000485367 PHLPP1O60346 1717 aa15.6■□□□□ 0.09
DDX56-212ENST00000485367 ANKRD30BQ9BXX2 1392 aa15.59■□□□□ 0.09
DDX56-212ENST00000485367 IFT172Q9UG01 1749 aa15.58■□□□□ 0.09
DDX56-212ENST00000485367 DCCP43146 1447 aa15.58■□□□□ 0.08
DDX56-212ENST00000485367 ROBO2Q9HCK4 1378 aa15.57■□□□□ 0.08
DDX56-212ENST00000485367 ADGRL3Q9HAR2 1447 aa15.57■□□□□ 0.08
DDX56-212ENST00000485367 NALCNQ8IZF0 1738 aa15.56■□□□□ 0.08
DDX56-212ENST00000485367 PTCH1Q13635 1447 aa15.55■□□□□ 0.08
DDX56-212ENST00000485367 SOCS7O14512 581 aa15.55■□□□□ 0.08
DDX56-212ENST00000485367 BRINP3Q76B58 766 aa15.55■□□□□ 0.08
DDX56-212ENST00000485367 MST1RQ04912 1400 aa15.55■□□□□ 0.08
DDX56-212ENST00000485367 STK26Q9P289 416 aa15.54■□□□□ 0.08
DDX56-212ENST00000485367 COL16A1Q07092 1604 aaPredicted RBP15.54■□□□□ 0.08
DDX56-212ENST00000485367 NEUROD1Q13562 356 aa15.54■□□□□ 0.08
DDX56-212ENST00000485367 JCADQ9P266 1359 aa15.53■□□□□ 0.08
DDX56-212ENST00000485367 TMEM132EQ6IEE7 984 aa15.52■□□□□ 0.08
DDX56-212ENST00000485367 AHDC1Q5TGY3 1603 aaPredicted RBP15.52■□□□□ 0.08
DDX56-212ENST00000485367 PIK3C2GO75747 1445 aa15.51■□□□□ 0.07
DDX56-212ENST00000485367 PRAG1Q86YV5 1406 aa15.51■□□□□ 0.07
DDX56-212ENST00000485367 ASXL1Q8IXJ9 1541 aa15.51■□□□□ 0.07
DDX56-212ENST00000485367 CCER1Q8TC90 406 aaPredicted RBP15.51■□□□□ 0.07
DDX56-212ENST00000485367 LRPPRCP42704 1394 aaKnown RBP15.5■□□□□ 0.07
DDX56-212ENST00000485367 DIEXFQ68CQ4 756 aaKnown RBP15.49■□□□□ 0.07
DDX56-212ENST00000485367 RGS17Q9UGC6 210 aaPredicted RBP15.49■□□□□ 0.07
DDX56-212ENST00000485367 CFAP70Q5T0N1 1121 aa15.48■□□□□ 0.07
DDX56-212ENST00000485367 WAPLQ7Z5K2 1190 aa15.48■□□□□ 0.07
DDX56-212ENST00000485367 C14orf93Q9H972 538 aaKnown RBP15.48■□□□□ 0.07
DDX56-212ENST00000485367 MYOM2P54296 1465 aa15.48■□□□□ 0.07
DDX56-212ENST00000485367 C1orf167Q5SNV9 1468 aa15.48■□□□□ 0.07
DDX56-212ENST00000485367 ABCC11Q96J66 1382 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms