RNA–Protein interactions for RNA: ENST00000485213.1

RBM3-206, Transcript of RNA binding motif protein 3, humanhuman

TSL 2

Gene RBM3, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3-206ENST00000485213 UBAP1LF5GYI3 381 aa28■■■□□ 2.07
RBM3-206ENST00000485213 SENP3Q9H4L4 574 aaPredicted RBP28■■■□□ 2.07
RBM3-206ENST00000485213 TRPM2O94759 1503 aa27.98■■■□□ 2.07
RBM3-206ENST00000485213 CHGAP10645 457 aaKnown RBP27.98■■■□□ 2.07
RBM3-206ENST00000485213 PLEKHG1Q9ULL1 1385 aa27.98■■■□□ 2.07
RBM3-206ENST00000485213 NUTM2DQ5VT03 806 aaPredicted RBP27.97■■■□□ 2.07
RBM3-206ENST00000485213 TRIM52Q96A61 297 aa27.95■■■□□ 2.06
RBM3-206ENST00000485213 ADAMTS13Q76LX8 1427 aa27.94■■■□□ 2.06
RBM3-206ENST00000485213 NWD1Q149M9 1564 aa27.94■■■□□ 2.06
RBM3-206ENST00000485213 NRXN3Q9Y4C0 1643 aa27.89■■■□□ 2.06
RBM3-206ENST00000485213 KCNA6P17658 529 aa27.89■■■□□ 2.06
RBM3-206ENST00000485213 CHD2O14647 1828 aaKnown RBP27.89■■■□□ 2.06
RBM3-206ENST00000485213 FOXD1Q16676 465 aa27.88■■■□□ 2.05
RBM3-206ENST00000485213 SLC4A1APQ9BWU0 796 aaKnown RBP27.88■■■□□ 2.05
RBM3-206ENST00000485213 NEXMIFQ5QGS0 1516 aa27.86■■■□□ 2.05
RBM3-206ENST00000485213 PPP1R15AO75807 674 aaPredicted RBP27.85■■■□□ 2.05
RBM3-206ENST00000485213 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.85■■■□□ 2.05
RBM3-206ENST00000485213 RBM33Q96EV2 1170 aaKnown RBP27.84■■■□□ 2.05
RBM3-206ENST00000485213 TMEM94Q12767 1356 aa27.84■■■□□ 2.05
RBM3-206ENST00000485213 SETD5Q9C0A6 1442 aa27.84■■■□□ 2.05
RBM3-206ENST00000485213 KIF1BO60333 1816 aa27.83■■■□□ 2.05
RBM3-206ENST00000485213 TBX22Q9Y458 520 aa27.83■■■□□ 2.05
RBM3-206ENST00000485213 PIP4K2BP78356 416 aa27.82■■■□□ 2.04
RBM3-206ENST00000485213 TOM1O60784 492 aa27.81■■■□□ 2.04
RBM3-206ENST00000485213 HDGFP51858 240 aaKnown RBP27.81■■■□□ 2.04
RBM3-206ENST00000485213 BCANQ96GW7 911 aa27.81■■■□□ 2.04
RBM3-206ENST00000485213 NKTRP30414 1462 aaKnown RBP27.81■■■□□ 2.04
RBM3-206ENST00000485213 PTPRUQ92729 1446 aa27.8■■■□□ 2.04
RBM3-206ENST00000485213 DIP2AQ14689 1571 aa27.8■■■□□ 2.04
RBM3-206ENST00000485213 SETBP1Q9Y6X0 1596 aa27.8■■■□□ 2.04
RBM3-206ENST00000485213 MPHOSPH9Q99550 1183 aa27.79■■■□□ 2.04
RBM3-206ENST00000485213 HSPA1LP34931 641 aa27.77■■■□□ 2.04
RBM3-206ENST00000485213 RAB3GAP2Q9H2M9 1393 aa27.76■■■□□ 2.03
RBM3-206ENST00000485213 PROSER2Q86WR7 435 aaPredicted RBP27.76■■■□□ 2.03
RBM3-206ENST00000485213 ZNF326Q5BKZ1 582 aaKnown RBP27.75■■■□□ 2.03
RBM3-206ENST00000485213 SCAF1Q9H7N4 1312 aaKnown RBP27.73■■■□□ 2.03
RBM3-206ENST00000485213 PPLO60437 1756 aa27.71■■■□□ 2.03
RBM3-206ENST00000485213 XRN1Q8IZH2 1706 aaKnown RBP27.71■■■□□ 2.03
RBM3-206ENST00000485213 METP08581 1390 aa27.71■■■□□ 2.03
RBM3-206ENST00000485213 PIK3R4Q99570 1358 aa27.71■■■□□ 2.03
RBM3-206ENST00000485213 SETD1AO15047 1707 aaKnown RBP27.7■■■□□ 2.03
RBM3-206ENST00000485213 SPATA31E1Q6ZUB1 1445 aa27.69■■■□□ 2.02
RBM3-206ENST00000485213 AMOTL2Q9Y2J4 779 aa27.65■■■□□ 2.02
RBM3-206ENST00000485213 CCDC144AA2RUR9 1427 aa27.63■■■□□ 2.01
RBM3-206ENST00000485213 IFT172Q9UG01 1749 aa27.63■■■□□ 2.01
RBM3-206ENST00000485213 RPGRIP1LQ68CZ1 1315 aa27.61■■■□□ 2.01
RBM3-206ENST00000485213 FAM135BQ49AJ0 1406 aa27.59■■■□□ 2.01
RBM3-206ENST00000485213 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.59■■■□□ 2.01
RBM3-206ENST00000485213 ROBO1Q9Y6N7 1651 aa27.59■■■□□ 2.01
RBM3-206ENST00000485213 NCOA3Q9Y6Q9 1424 aa27.58■■■□□ 2.01
RBM3-206ENST00000485213 MSH6P52701 1360 aa27.58■■■□□ 2.01
RBM3-206ENST00000485213 ADGRF5Q8IZF2 1346 aa27.57■■■□□ 2
RBM3-206ENST00000485213 VGFO15240 615 aaPredicted RBP27.56■■■□□ 2
RBM3-206ENST00000485213 RGL3Q3MIN7 710 aa27.55■■■□□ 2
RBM3-206ENST00000485213 DISP3Q9P2K9 1392 aa27.54■■■□□ 2
RBM3-206ENST00000485213 ANKRD30BQ9BXX2 1392 aa27.53■■■□□ 2
RBM3-206ENST00000485213 ACIN1Q9UKV3 1341 aaKnown RBP27.53■■■□□ 2
RBM3-206ENST00000485213 HRCP23327 699 aa27.51■■□□□ 1.99
RBM3-206ENST00000485213 SLAIN2Q9P270 581 aa27.51■■□□□ 1.99
RBM3-206ENST00000485213 ASXL1Q8IXJ9 1541 aa27.51■■□□□ 1.99
RBM3-206ENST00000485213 MED1Q15648 1581 aaPredicted RBP27.5■■□□□ 1.99
RBM3-206ENST00000485213 ROBO2Q9HCK4 1378 aa27.48■■□□□ 1.99
RBM3-206ENST00000485213 NALCNQ8IZF0 1738 aa27.48■■□□□ 1.99
RBM3-206ENST00000485213 ILDR2Q71H61 639 aa27.48■■□□□ 1.99
RBM3-206ENST00000485213 C19orf44Q9H6X5 657 aa27.48■■□□□ 1.99
RBM3-206ENST00000485213 PRAG1Q86YV5 1406 aa27.48■■□□□ 1.99
RBM3-206ENST00000485213 PIK3C2GO75747 1445 aa27.45■■□□□ 1.98
RBM3-206ENST00000485213 PTCH1Q13635 1447 aa27.44■■□□□ 1.98
RBM3-206ENST00000485213 NRXN1Q9ULB1 1477 aa27.44■■□□□ 1.98
RBM3-206ENST00000485213 C14orf37Q86TY3 774 aa27.43■■□□□ 1.98
RBM3-206ENST00000485213 ADGRL3Q9HAR2 1447 aa27.42■■□□□ 1.98
RBM3-206ENST00000485213 DCCP43146 1447 aa27.41■■□□□ 1.98
RBM3-206ENST00000485213 MST1RQ04912 1400 aa27.41■■□□□ 1.98
RBM3-206ENST00000485213 COL16A1Q07092 1604 aaPredicted RBP27.39■■□□□ 1.98
RBM3-206ENST00000485213 CADPS2Q86UW7 1296 aa27.39■■□□□ 1.98
RBM3-206ENST00000485213 PHLPP1O60346 1717 aa27.38■■□□□ 1.97
RBM3-206ENST00000485213 MYOM2P54296 1465 aa27.38■■□□□ 1.97
RBM3-206ENST00000485213 ATF3P18847 181 aa27.37■■□□□ 1.97
RBM3-206ENST00000485213 TMEM132EQ6IEE7 984 aa27.36■■□□□ 1.97
RBM3-206ENST00000485213 AHDC1Q5TGY3 1603 aaPredicted RBP27.34■■□□□ 1.97
RBM3-206ENST00000485213 TECPR2O15040 1411 aa27.34■■□□□ 1.97
RBM3-206ENST00000485213 BRINP3Q76B58 766 aa27.34■■□□□ 1.97
RBM3-206ENST00000485213 LRPPRCP42704 1394 aaKnown RBP27.33■■□□□ 1.97
RBM3-206ENST00000485213 KNDC1Q76NI1 1749 aa27.33■■□□□ 1.96
RBM3-206ENST00000485213 C14orf93Q9H972 538 aaKnown RBP27.32■■□□□ 1.96
RBM3-206ENST00000485213 DHX57Q6P158 1386 aaKnown RBP27.32■■□□□ 1.96
RBM3-206ENST00000485213 PLEKHH1Q9ULM0 1364 aa27.31■■□□□ 1.96
RBM3-206ENST00000485213 CFAP70Q5T0N1 1121 aa27.3■■□□□ 1.96
RBM3-206ENST00000485213 STK26Q9P289 416 aa27.29■■□□□ 1.96
RBM3-206ENST00000485213 ABCC11Q96J66 1382 aa27.29■■□□□ 1.96
RBM3-206ENST00000485213 YTHDC2Q9H6S0 1430 aaKnown RBP27.28■■□□□ 1.96
RBM3-206ENST00000485213 WAPLQ7Z5K2 1190 aa27.28■■□□□ 1.96
RBM3-206ENST00000485213 NHSL1Q5SYE7 1610 aa27.27■■□□□ 1.96
RBM3-206ENST00000485213 C1orf167Q5SNV9 1468 aa27.26■■□□□ 1.95
RBM3-206ENST00000485213 LAMC1P11047 1609 aa27.25■■□□□ 1.95
RBM3-206ENST00000485213 ADGRB1O14514 1584 aa27.25■■□□□ 1.95
RBM3-206ENST00000485213 DDX17Q92841 729 aaKnown RBP27.24■■□□□ 1.95
RBM3-206ENST00000485213 RGS17Q9UGC6 210 aaPredicted RBP27.24■■□□□ 1.95
RBM3-206ENST00000485213 CDC42BPGQ6DT37 1551 aa27.22■■□□□ 1.95
RBM3-206ENST00000485213 JCADQ9P266 1359 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms