RNA–Protein interactions for RNA: ENST00000484552.5

CAST-210, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-210ENST00000484552 HNRNPUL2Q1KMD3 747 aaKnown RBP10.53□□□□□ -0.72
CAST-210ENST00000484552 A6NJR5 290 aa10.52□□□□□ -0.72
CAST-210ENST00000484552 EXOC5O00471 708 aa10.52□□□□□ -0.72
CAST-210ENST00000484552 FLIIQ13045 1269 aa10.52□□□□□ -0.72
CAST-210ENST00000484552 CACTIN-AS1Q8N1I8 211 aa10.52□□□□□ -0.72
CAST-210ENST00000484552 POLD1P28340 1107 aa10.52□□□□□ -0.73
CAST-210ENST00000484552 CXorf38Q8TB03 319 aa10.52□□□□□ -0.73
CAST-210ENST00000484552 FEZ2Q9UHY8 353 aaPredicted RBP10.52□□□□□ -0.73
CAST-210ENST00000484552 SSFA2P28290 1259 aa10.51□□□□□ -0.73
CAST-210ENST00000484552 TRIM41Q8WV44 630 aa10.51□□□□□ -0.73
CAST-210ENST00000484552 RAB11FIP3O75154 756 aa10.5□□□□□ -0.73
CAST-210ENST00000484552 PEX14O75381 377 aa10.5□□□□□ -0.73
CAST-210ENST00000484552 ZFYVE27Q5T4F4 411 aa10.5□□□□□ -0.73
CAST-210ENST00000484552 P3H3Q8IVL6 736 aa10.5□□□□□ -0.73
CAST-210ENST00000484552 SMC5Q8IY18 1101 aa10.5□□□□□ -0.73
CAST-210ENST00000484552 MSL3Q8N5Y2 521 aaKnown RBP10.49□□□□□ -0.73
CAST-210ENST00000484552 ARHGEF1Q92888 912 aaKnown RBP10.49□□□□□ -0.73
CAST-210ENST00000484552 CLUAP1Q96AJ1 413 aa10.49□□□□□ -0.73
CAST-210ENST00000484552 IFT140Q96RY7 1462 aa10.49□□□□□ -0.73
CAST-210ENST00000484552 TOPBP1Q92547 1522 aa10.49□□□□□ -0.73
CAST-210ENST00000484552 ZRANB2O95218 330 aaKnown RBP eCLIP10.49□□□□□ -0.73
CAST-210ENST00000484552 ARIH1Q9Y4X5 557 aaPredicted RBP10.49□□□□□ -0.73
CAST-210ENST00000484552 FANCIQ9NVI1 1328 aa10.49□□□□□ -0.73
CAST-210ENST00000484552 ZNF280DQ6N043 979 aa10.48□□□□□ -0.73
CAST-210ENST00000484552 CLEC4GQ6UXB4 293 aa10.48□□□□□ -0.73
CAST-210ENST00000484552 ABCC8Q09428 1581 aa10.48□□□□□ -0.73
CAST-210ENST00000484552 MAP4K4O95819 1239 aaPredicted RBP10.47□□□□□ -0.73
CAST-210ENST00000484552 CSPP1Q1MSJ5 1256 aa10.47□□□□□ -0.73
CAST-210ENST00000484552 CCDC181Q5TID7 509 aa10.47□□□□□ -0.73
CAST-210ENST00000484552 IGF1RP08069 1367 aa10.47□□□□□ -0.73
CAST-210ENST00000484552 GOLGA6CA6NDK9 693 aa10.47□□□□□ -0.73
CAST-210ENST00000484552 GOLGA6BA6NDN3 693 aa10.47□□□□□ -0.73
CAST-210ENST00000484552 GOLGA6DP0CG33 693 aa10.47□□□□□ -0.73
CAST-210ENST00000484552 RGS3P49796 1198 aa10.47□□□□□ -0.73
CAST-210ENST00000484552 MAMSTRQ6ZN01 415 aa10.47□□□□□ -0.73
CAST-210ENST00000484552 OSCARQ8IYS5 282 aa10.47□□□□□ -0.73
CAST-210ENST00000484552 GOLGA6AQ9NYA3 693 aa10.47□□□□□ -0.73
CAST-210ENST00000484552 SERPINA10Q9UK55 444 aa10.47□□□□□ -0.73
CAST-210ENST00000484552 ZNF608Q9ULD9 1512 aaPredicted RBP10.46□□□□□ -0.73
CAST-210ENST00000484552 DNMBPQ6XZF7 1577 aa10.46□□□□□ -0.73
CAST-210ENST00000484552 CREB3O43889 395 aa10.46□□□□□ -0.74
CAST-210ENST00000484552 PNMA2Q9UL42 364 aa10.46□□□□□ -0.74
CAST-210ENST00000484552 IRF6O14896 467 aa10.45□□□□□ -0.74
CAST-210ENST00000484552 SH3BP5O60239 455 aa10.45□□□□□ -0.74
CAST-210ENST00000484552 NBPF6Q5VWK0 638 aa10.45□□□□□ -0.74
CAST-210ENST00000484552 ZNF662Q6ZS27 426 aa10.45□□□□□ -0.74
CAST-210ENST00000484552 DDX46Q7L014 1031 aaKnown RBP10.45□□□□□ -0.74
CAST-210ENST00000484552 NBPF5PQ86XG9 351 aaPredicted RBP10.45□□□□□ -0.74
CAST-210ENST00000484552 SREK1Q8WXA9 508 aaKnown RBP10.45□□□□□ -0.74
CAST-210ENST00000484552 NBPF4Q96M43 638 aa10.45□□□□□ -0.74
CAST-210ENST00000484552 EPB41L2O43491 1005 aaKnown RBP10.44□□□□□ -0.74
CAST-210ENST00000484552 DHX16O60231 1041 aaKnown RBP10.44□□□□□ -0.74
CAST-210ENST00000484552 NBPF10Q6P3W6 841 aaKnown RBP10.44□□□□□ -0.74
CAST-210ENST00000484552 HELBQ8NG08 1087 aaPredicted RBP10.44□□□□□ -0.74
CAST-210ENST00000484552 CCDC97Q96F63 343 aaPredicted RBP10.44□□□□□ -0.74
CAST-210ENST00000484552 MAF1Q9H063 256 aa10.44□□□□□ -0.74
CAST-210ENST00000484552 BSDC1Q9NW68 430 aaPredicted RBP10.44□□□□□ -0.74
CAST-210ENST00000484552 SCP2P22307 547 aa10.44□□□□□ -0.74
CAST-210ENST00000484552 MTA1Q13330 715 aa10.44□□□□□ -0.74
CAST-210ENST00000484552 METTL14Q9HCE5 456 aaKnown RBP10.44□□□□□ -0.74
CAST-210ENST00000484552 SSR1P43307 286 aaKnown RBP10.43□□□□□ -0.74
CAST-210ENST00000484552 FOSBP53539 338 aa10.43□□□□□ -0.74
CAST-210ENST00000484552 RHBDL3P58872 404 aa10.43□□□□□ -0.74
CAST-210ENST00000484552 TAF3Q5VWG9 929 aa10.43□□□□□ -0.74
CAST-210ENST00000484552 ANKRD23Q86SG2 305 aa10.43□□□□□ -0.74
CAST-210ENST00000484552 HS6ST3Q8IZP7 471 aa10.43□□□□□ -0.74
CAST-210ENST00000484552 FRMD4BQ9Y2L6 1034 aa10.43□□□□□ -0.74
CAST-210ENST00000484552 KIF4AO95239 1232 aa10.42□□□□□ -0.74
CAST-210ENST00000484552 TSR1Q2NL82 804 aaKnown RBP10.42□□□□□ -0.74
CAST-210ENST00000484552 CCDC85AQ96PX6 553 aaPredicted RBP10.42□□□□□ -0.74
CAST-210ENST00000484552 PAX3P23760 479 aa10.42□□□□□ -0.74
CAST-210ENST00000484552 APLP1P51693 650 aa10.42□□□□□ -0.74
CAST-210ENST00000484552 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.42□□□□□ -0.74
CAST-210ENST00000484552 YY1AP1Q9H869 796 aa10.42□□□□□ -0.74
CAST-210ENST00000484552 JADE2Q9NQC1 790 aa10.42□□□□□ -0.74
CAST-210ENST00000484552 ZNF777Q9ULD5 760 aaPredicted RBP10.42□□□□□ -0.74
CAST-210ENST00000484552 EIF4G3O43432 1585 aaKnown RBP10.41□□□□□ -0.74
CAST-210ENST00000484552 GET4Q7L5D6 327 aaPredicted RBP10.41□□□□□ -0.74
CAST-210ENST00000484552 TARBP1Q13395 1621 aaKnown RBP10.4□□□□□ -0.74
CAST-210ENST00000484552 KCNA1Q09470 495 aa10.4□□□□□ -0.74
CAST-210ENST00000484552 ZKSCAN2Q63HK3 967 aa10.4□□□□□ -0.74
CAST-210ENST00000484552 POLA1P09884 1462 aaPredicted RBP10.4□□□□□ -0.74
CAST-210ENST00000484552 TCF3P15923 654 aa10.39□□□□□ -0.75
CAST-210ENST00000484552 RAI14Q9P0K7 980 aa10.39□□□□□ -0.75
CAST-210ENST00000484552 CEP126Q9P2H0 1117 aa10.39□□□□□ -0.75
CAST-210ENST00000484552 EIF3JO75822 258 aaKnown RBP10.39□□□□□ -0.75
CAST-210ENST00000484552 GIMAP6Q6P9H5 292 aa10.39□□□□□ -0.75
CAST-210ENST00000484552 STK24Q9Y6E0 443 aa10.39□□□□□ -0.75
CAST-210ENST00000484552 RPGRIP1LQ68CZ1 1315 aa10.38□□□□□ -0.75
CAST-210ENST00000484552 MAP2K1Q02750 393 aaPredicted RBP10.38□□□□□ -0.75
CAST-210ENST00000484552 ZKSCAN8Q15776 578 aaPredicted RBP10.38□□□□□ -0.75
CAST-210ENST00000484552 ZNF500O60304 480 aaPredicted RBP10.37□□□□□ -0.75
CAST-210ENST00000484552 ZMYND10O75800 440 aa10.37□□□□□ -0.75
CAST-210ENST00000484552 HSP90AA1P07900 732 aaKnown RBP10.37□□□□□ -0.75
CAST-210ENST00000484552 FAM43AQ8N2R8 423 aa10.37□□□□□ -0.75
CAST-210ENST00000484552 MPNDQ8N594 471 aa10.37□□□□□ -0.75
CAST-210ENST00000484552 SNRNP27Q8WVK2 155 aaKnown RBP10.37□□□□□ -0.75
CAST-210ENST00000484552 ARHGEF10LQ9HCE6 1279 aa10.37□□□□□ -0.75
CAST-210ENST00000484552 KIAA1522Q9P206 1035 aaPredicted RBP10.37□□□□□ -0.75
CAST-210ENST00000484552 ONECUT3O60422 494 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms