RNA–Protein interactions for RNA: ENST00000483881.1

PKP4-212, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-212ENST00000483881 LARP6Q9BRS8 491 aaKnown RBP7.93□□□□□ -1.14
PKP4-212ENST00000483881 TOR4AQ9NXH8 423 aa7.93□□□□□ -1.14
PKP4-212ENST00000483881 TLL1O43897 1013 aa7.92□□□□□ -1.14
PKP4-212ENST00000483881 TSR1Q2NL82 804 aaKnown RBP7.92□□□□□ -1.14
PKP4-212ENST00000483881 CDCA7LQ96GN5 454 aa7.92□□□□□ -1.14
PKP4-212ENST00000483881 DDX27Q96GQ7 796 aaKnown RBP7.92□□□□□ -1.14
PKP4-212ENST00000483881 PNMA3Q9UL41 463 aa7.91□□□□□ -1.14
PKP4-212ENST00000483881 GSK3AP49840 483 aa7.9□□□□□ -1.14
PKP4-212ENST00000483881 HDGFP51858 240 aaKnown RBP7.9□□□□□ -1.14
PKP4-212ENST00000483881 LMOD2Q6P5Q4 547 aa7.9□□□□□ -1.14
PKP4-212ENST00000483881 TRIM47Q96LD4 638 aa7.9□□□□□ -1.14
PKP4-212ENST00000483881 ATP13A2Q9NQ11 1180 aa7.9□□□□□ -1.14
PKP4-212ENST00000483881 PRSS12P56730 875 aa7.89□□□□□ -1.15
PKP4-212ENST00000483881 BLOC1S3Q6QNY0 202 aa7.89□□□□□ -1.15
PKP4-212ENST00000483881 SLC16A10Q8TF71 515 aa7.88□□□□□ -1.15
PKP4-212ENST00000483881 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.87□□□□□ -1.15
PKP4-212ENST00000483881 PCDHB3Q9Y5E6 796 aa7.87□□□□□ -1.15
PKP4-212ENST00000483881 KCNMA1Q12791 1236 aa7.86□□□□□ -1.15
PKP4-212ENST00000483881 MFSD10Q14728 455 aa7.86□□□□□ -1.15
PKP4-212ENST00000483881 NECTIN2Q92692 538 aa7.86□□□□□ -1.15
PKP4-212ENST00000483881 DDX12PQ92771 950 aa7.86□□□□□ -1.15
PKP4-212ENST00000483881 NBPF26B4DH59 902 aa7.85□□□□□ -1.15
PKP4-212ENST00000483881 CYP4X1Q8N118 509 aa7.85□□□□□ -1.15
PKP4-212ENST00000483881 EN1Q05925 392 aaPredicted RBP7.84□□□□□ -1.15
PKP4-212ENST00000483881 SWT1Q5T5J6 900 aaKnown RBP7.84□□□□□ -1.15
PKP4-212ENST00000483881 NUDT18Q6ZVK8 323 aa7.84□□□□□ -1.15
PKP4-212ENST00000483881 SENP2Q9HC62 589 aa7.84□□□□□ -1.15
PKP4-212ENST00000483881 MAP3K7O43318 606 aa7.83□□□□□ -1.16
PKP4-212ENST00000483881 KRTAP9-2Q9BYQ4 174 aa7.83□□□□□ -1.16
PKP4-212ENST00000483881 SLF2Q8IX21 1173 aa7.82□□□□□ -1.16
PKP4-212ENST00000483881 IRF7Q92985 503 aa7.82□□□□□ -1.16
PKP4-212ENST00000483881 NXF1Q9UBU9 619 aaKnown RBP7.82□□□□□ -1.16
PKP4-212ENST00000483881 KRTAP9-6A0A140TA67 174 aa7.8□□□□□ -1.16
PKP4-212ENST00000483881 HS6ST3Q8IZP7 471 aa7.8□□□□□ -1.16
PKP4-212ENST00000483881 PKD2Q13563 968 aa7.79□□□□□ -1.16
PKP4-212ENST00000483881 VEGFBP49765 207 aa7.78□□□□□ -1.16
PKP4-212ENST00000483881 NBR1Q14596 966 aa7.78□□□□□ -1.16
PKP4-212ENST00000483881 NKX1-1Q15270 411 aaPredicted RBP7.78□□□□□ -1.16
PKP4-212ENST00000483881 TMEM151AQ8N4L1 468 aa7.78□□□□□ -1.16
PKP4-212ENST00000483881 ERBB4Q15303 1308 aa7.78□□□□□ -1.16
PKP4-212ENST00000483881 PRR14Q9BWN1 585 aa7.77□□□□□ -1.17
PKP4-212ENST00000483881 DPYSL4O14531 572 aa7.76□□□□□ -1.17
PKP4-212ENST00000483881 KIFC2Q96AC6 838 aa7.76□□□□□ -1.17
PKP4-212ENST00000483881 TTC24A2A3L6 582 aaPredicted RBP7.75□□□□□ -1.17
PKP4-212ENST00000483881 GDF11O95390 407 aa7.75□□□□□ -1.17
PKP4-212ENST00000483881 ADH1BP00325 375 aa7.75□□□□□ -1.17
PKP4-212ENST00000483881 SMPD1P17405 629 aa7.75□□□□□ -1.17
PKP4-212ENST00000483881 SLC6A16Q9GZN6 736 aa7.75□□□□□ -1.17
PKP4-212ENST00000483881 AMER1Q5JTC6 1135 aaPredicted RBP7.74□□□□□ -1.17
PKP4-212ENST00000483881 RPIAP49247 311 aa7.73□□□□□ -1.17
PKP4-212ENST00000483881 RASSF7Q02833 373 aa7.73□□□□□ -1.17
PKP4-212ENST00000483881 NPAS3Q8IXF0 933 aa7.73□□□□□ -1.17
PKP4-212ENST00000483881 CERKQ8TCT0 537 aa7.73□□□□□ -1.17
PKP4-212ENST00000483881 H3BM21 787 aa7.72□□□□□ -1.17
PKP4-212ENST00000483881 KRTAP1-3Q8IUG1 177 aa7.72□□□□□ -1.17
PKP4-212ENST00000483881 CD2BP2O95400 341 aaKnown RBP7.71□□□□□ -1.18
PKP4-212ENST00000483881 PRIM1P49642 420 aaKnown RBP7.71□□□□□ -1.18
PKP4-212ENST00000483881 PSMG3-AS1Q96PY0 264 aa7.71□□□□□ -1.18
PKP4-212ENST00000483881 RYDENQ9NUL5 291 aaKnown RBP7.68□□□□□ -1.18
PKP4-212ENST00000483881 ACTN4O43707 911 aaKnown RBP7.67□□□□□ -1.18
PKP4-212ENST00000483881 SLC4A3P48751 1232 aa7.67□□□□□ -1.18
PKP4-212ENST00000483881 CAMK2BQ13554 666 aa7.67□□□□□ -1.18
PKP4-212ENST00000483881 J3QL48 77 aa7.66□□□□□ -1.18
PKP4-212ENST00000483881 HPS1Q92902 700 aa7.66□□□□□ -1.18
PKP4-212ENST00000483881 SNIP1Q8TAD8 396 aaKnown RBP7.65□□□□□ -1.18
PKP4-212ENST00000483881 CHGAP10645 457 aaKnown RBP7.64□□□□□ -1.19
PKP4-212ENST00000483881 GPAT2Q6NUI2 795 aa7.64□□□□□ -1.19
PKP4-212ENST00000483881 TTC13Q8NBP0 860 aa7.64□□□□□ -1.19
PKP4-212ENST00000483881 DNAJC5Q9H3Z4 198 aa7.64□□□□□ -1.19
PKP4-212ENST00000483881 RBM27Q9P2N5 1060 aaKnown RBP7.64□□□□□ -1.19
PKP4-212ENST00000483881 EYA1Q99502 592 aa7.63□□□□□ -1.19
PKP4-212ENST00000483881 CDHR5Q9HBB8 845 aa7.63□□□□□ -1.19
PKP4-212ENST00000483881 NR1I2O75469 434 aa7.62□□□□□ -1.19
PKP4-212ENST00000483881 SCUBE3Q8IX30 993 aa7.61□□□□□ -1.19
PKP4-212ENST00000483881 FCF1Q9Y324 198 aaKnown RBP7.61□□□□□ -1.19
PKP4-212ENST00000483881 WNT7AO00755 349 aa7.59□□□□□ -1.19
PKP4-212ENST00000483881 KMT5BQ4FZB7 885 aa7.59□□□□□ -1.19
PKP4-212ENST00000483881 PADI6Q6TGC4 694 aa7.59□□□□□ -1.19
PKP4-212ENST00000483881 SPSB2Q99619 263 aa7.59□□□□□ -1.19
PKP4-212ENST00000483881 IGHA1P01876 353 aa7.58□□□□□ -1.2
PKP4-212ENST00000483881 CADPS2Q86UW7 1296 aa7.57□□□□□ -1.2
PKP4-212ENST00000483881 CFHP08603 1231 aa7.56□□□□□ -1.2
PKP4-212ENST00000483881 MRGPRX2Q96LB1 330 aa7.56□□□□□ -1.2
PKP4-212ENST00000483881 PDIA6Q15084 440 aa7.55□□□□□ -1.2
PKP4-212ENST00000483881 TRIM46Q7Z4K8 759 aa7.55□□□□□ -1.2
PKP4-212ENST00000483881 VSIG8P0DPA2 414 aa7.54□□□□□ -1.2
PKP4-212ENST00000483881 BMP1P13497 986 aa7.54□□□□□ -1.2
PKP4-212ENST00000483881 ADAMTS8Q9UP79 889 aa7.54□□□□□ -1.2
PKP4-212ENST00000483881 GTPBP6O43824 516 aaPredicted RBP7.53□□□□□ -1.2
PKP4-212ENST00000483881 ADAM23O75077 832 aa7.53□□□□□ -1.2
PKP4-212ENST00000483881 NPDC1Q9NQX5 325 aaPredicted RBP7.53□□□□□ -1.2
PKP4-212ENST00000483881 DNMT3AQ9Y6K1 912 aaPredicted RBP7.53□□□□□ -1.2
PKP4-212ENST00000483881 RNF225M0QZC1 329 aaPredicted RBP7.52□□□□□ -1.21
PKP4-212ENST00000483881 GRXCR2A6NFK2 248 aa7.51□□□□□ -1.21
PKP4-212ENST00000483881 PUS10Q3MIT2 529 aaKnown RBP7.51□□□□□ -1.21
PKP4-212ENST00000483881 LCE3BQ5TA77 95 aa7.51□□□□□ -1.21
PKP4-212ENST00000483881 RTN4Q9NQC3 1192 aaKnown RBP7.51□□□□□ -1.21
PKP4-212ENST00000483881 SLC10A3P09131 477 aa7.5□□□□□ -1.21
PKP4-212ENST00000483881 ZBTB24O43167 697 aaPredicted RBP7.49□□□□□ -1.21
PKP4-212ENST00000483881 OSBPP22059 807 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms