RNA–Protein interactions for RNA: ENST00000483561.2

DENND4B-209, Transcript of DENN domain containing 4B, humanhuman

TSL 4

Gene DENND4B, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4B-209ENST00000483561 XIRP1Q702N8 1843 aaKnown RBP34.8■■■■□ 3.16
DENND4B-209ENST00000483561 TRIM52Q96A61 297 aa34.77■■■■□ 3.16
DENND4B-209ENST00000483561 BCANQ96GW7 911 aa34.77■■■■□ 3.16
DENND4B-209ENST00000483561 NUTM2DQ5VT03 806 aaPredicted RBP34.76■■■■□ 3.16
DENND4B-209ENST00000483561 ALKQ9UM73 1620 aa34.76■■■■□ 3.15
DENND4B-209ENST00000483561 PPP1R15AO75807 674 aaPredicted RBP34.75■■■■□ 3.15
DENND4B-209ENST00000483561 PIP4K2BP78356 416 aa34.74■■■■□ 3.15
DENND4B-209ENST00000483561 SCAF1Q9H7N4 1312 aaKnown RBP34.74■■■■□ 3.15
DENND4B-209ENST00000483561 TOM1O60784 492 aa34.73■■■■□ 3.15
DENND4B-209ENST00000483561 PLEKHG1Q9ULL1 1385 aa34.73■■■■□ 3.15
DENND4B-209ENST00000483561 CLTCL1P53675 1640 aa34.71■■■■□ 3.15
DENND4B-209ENST00000483561 HDGFP51858 240 aaKnown RBP34.7■■■■□ 3.15
DENND4B-209ENST00000483561 KCNA6P17658 529 aa34.68■■■■□ 3.14
DENND4B-209ENST00000483561 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.67■■■■□ 3.14
DENND4B-209ENST00000483561 TRPM2O94759 1503 aa34.66■■■■□ 3.14
DENND4B-209ENST00000483561 CHD2O14647 1828 aaKnown RBP34.66■■■■□ 3.14
DENND4B-209ENST00000483561 NWD1Q149M9 1564 aa34.65■■■■□ 3.14
DENND4B-209ENST00000483561 KIF1BO60333 1816 aa34.64■■■■□ 3.14
DENND4B-209ENST00000483561 SLC4A1APQ9BWU0 796 aaKnown RBP34.62■■■■□ 3.13
DENND4B-209ENST00000483561 RBM33Q96EV2 1170 aaKnown RBP34.61■■■■□ 3.13
DENND4B-209ENST00000483561 ADAMTS13Q76LX8 1427 aa34.6■■■■□ 3.13
DENND4B-209ENST00000483561 TMEM94Q12767 1356 aa34.59■■■■□ 3.13
DENND4B-209ENST00000483561 HSPA1LP34931 641 aa34.58■■■■□ 3.13
DENND4B-209ENST00000483561 ZNF326Q5BKZ1 582 aaKnown RBP34.58■■■■□ 3.13
DENND4B-209ENST00000483561 PROSER2Q86WR7 435 aaPredicted RBP34.58■■■■□ 3.13
DENND4B-209ENST00000483561 TBX22Q9Y458 520 aa34.56■■■■□ 3.12
DENND4B-209ENST00000483561 NKTRP30414 1462 aaKnown RBP34.55■■■■□ 3.12
DENND4B-209ENST00000483561 FOXD1Q16676 465 aa34.54■■■■□ 3.12
DENND4B-209ENST00000483561 DIP2AQ14689 1571 aa34.53■■■■□ 3.12
DENND4B-209ENST00000483561 NRXN3Q9Y4C0 1643 aa34.53■■■■□ 3.12
DENND4B-209ENST00000483561 NEXMIFQ5QGS0 1516 aa34.51■■■■□ 3.12
DENND4B-209ENST00000483561 DISP3Q9P2K9 1392 aa34.47■■■■□ 3.11
DENND4B-209ENST00000483561 SETBP1Q9Y6X0 1596 aa34.45■■■■□ 3.11
DENND4B-209ENST00000483561 SETD5Q9C0A6 1442 aa34.45■■■■□ 3.11
DENND4B-209ENST00000483561 MPHOSPH9Q99550 1183 aa34.44■■■■□ 3.1
DENND4B-209ENST00000483561 PTPRUQ92729 1446 aa34.43■■■■□ 3.1
DENND4B-209ENST00000483561 PIK3R4Q99570 1358 aa34.41■■■■□ 3.1
DENND4B-209ENST00000483561 PPLO60437 1756 aa34.37■■■■□ 3.09
DENND4B-209ENST00000483561 MSH6P52701 1360 aa34.36■■■■□ 3.09
DENND4B-209ENST00000483561 AMOTL2Q9Y2J4 779 aa34.36■■■■□ 3.09
DENND4B-209ENST00000483561 XRN1Q8IZH2 1706 aaKnown RBP34.35■■■■□ 3.09
DENND4B-209ENST00000483561 RAB3GAP2Q9H2M9 1393 aa34.35■■■■□ 3.09
DENND4B-209ENST00000483561 METP08581 1390 aa34.34■■■■□ 3.09
DENND4B-209ENST00000483561 ROBO1Q9Y6N7 1651 aa34.33■■■■□ 3.09
DENND4B-209ENST00000483561 CCDC144AA2RUR9 1427 aa34.3■■■■□ 3.08
DENND4B-209ENST00000483561 FAM135BQ49AJ0 1406 aa34.3■■■■□ 3.08
DENND4B-209ENST00000483561 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.3■■■■□ 3.08
DENND4B-209ENST00000483561 C14orf37Q86TY3 774 aa34.29■■■■□ 3.08
DENND4B-209ENST00000483561 SETD1AO15047 1707 aaKnown RBP34.29■■■■□ 3.08
DENND4B-209ENST00000483561 NCOA3Q9Y6Q9 1424 aa34.27■■■■□ 3.08
DENND4B-209ENST00000483561 MED1Q15648 1581 aaPredicted RBP34.27■■■■□ 3.08
DENND4B-209ENST00000483561 RPGRIP1LQ68CZ1 1315 aa34.27■■■■□ 3.08
DENND4B-209ENST00000483561 VGFO15240 615 aaPredicted RBP34.26■■■■□ 3.08
DENND4B-209ENST00000483561 ILDR2Q71H61 639 aa34.24■■■■□ 3.07
DENND4B-209ENST00000483561 RGL3Q3MIN7 710 aa34.23■■■■□ 3.07
DENND4B-209ENST00000483561 SLAIN2Q9P270 581 aa34.23■■■■□ 3.07
DENND4B-209ENST00000483561 IFT172Q9UG01 1749 aa34.23■■■■□ 3.07
DENND4B-209ENST00000483561 SPATA31E1Q6ZUB1 1445 aa34.22■■■■□ 3.07
DENND4B-209ENST00000483561 ACIN1Q9UKV3 1341 aaKnown RBP34.22■■■■□ 3.07
DENND4B-209ENST00000483561 C19orf44Q9H6X5 657 aa34.19■■■■□ 3.06
DENND4B-209ENST00000483561 ADGRF5Q8IZF2 1346 aa34.15■■■■□ 3.06
DENND4B-209ENST00000483561 PHLPP1O60346 1717 aa34.14■■■■□ 3.06
DENND4B-209ENST00000483561 ATF3P18847 181 aa34.13■■■■□ 3.05
DENND4B-209ENST00000483561 CADPS2Q86UW7 1296 aa34.13■■■■□ 3.05
DENND4B-209ENST00000483561 NALCNQ8IZF0 1738 aa34.12■■■■□ 3.05
DENND4B-209ENST00000483561 ANKRD30BQ9BXX2 1392 aa34.07■■■■□ 3.04
DENND4B-209ENST00000483561 ROBO2Q9HCK4 1378 aa34.05■■■■□ 3.04
DENND4B-209ENST00000483561 DCCP43146 1447 aa34.04■■■■□ 3.04
DENND4B-209ENST00000483561 ADGRL3Q9HAR2 1447 aa34.04■■■■□ 3.04
DENND4B-209ENST00000483561 PTCH1Q13635 1447 aa34.04■■■■□ 3.04
DENND4B-209ENST00000483561 COL16A1Q07092 1604 aaPredicted RBP34.01■■■■□ 3.04
DENND4B-209ENST00000483561 HRCP23327 699 aa34.01■■■■□ 3.03
DENND4B-209ENST00000483561 MST1RQ04912 1400 aa34■■■■□ 3.03
DENND4B-209ENST00000483561 ASXL1Q8IXJ9 1541 aa33.99■■■■□ 3.03
DENND4B-209ENST00000483561 PIK3C2GO75747 1445 aa33.98■■■■□ 3.03
DENND4B-209ENST00000483561 PRAG1Q86YV5 1406 aa33.98■■■■□ 3.03
DENND4B-209ENST00000483561 BRINP3Q76B58 766 aa33.97■■■■□ 3.03
DENND4B-209ENST00000483561 PHF23Q9BUL5 403 aaPredicted RBP33.97■■■■□ 3.03
DENND4B-209ENST00000483561 AHDC1Q5TGY3 1603 aaPredicted RBP33.97■■■■□ 3.03
DENND4B-209ENST00000483561 TMEM132EQ6IEE7 984 aa33.95■■■■□ 3.03
DENND4B-209ENST00000483561 STK26Q9P289 416 aa33.94■■■■□ 3.02
DENND4B-209ENST00000483561 MYOM2P54296 1465 aa33.91■■■■□ 3.02
DENND4B-209ENST00000483561 KNDC1Q76NI1 1749 aa33.9■■■■□ 3.02
DENND4B-209ENST00000483561 NRXN1Q9ULB1 1477 aa33.9■■■■□ 3.02
DENND4B-209ENST00000483561 JCADQ9P266 1359 aa33.89■■■■□ 3.02
DENND4B-209ENST00000483561 LRPPRCP42704 1394 aaKnown RBP33.88■■■■□ 3.01
DENND4B-209ENST00000483561 NHSL1Q5SYE7 1610 aa33.88■■■■□ 3.01
DENND4B-209ENST00000483561 CFAP70Q5T0N1 1121 aa33.86■■■■□ 3.01
DENND4B-209ENST00000483561 C1orf167Q5SNV9 1468 aa33.85■■■■□ 3.01
DENND4B-209ENST00000483561 WAPLQ7Z5K2 1190 aa33.85■■■■□ 3.01
DENND4B-209ENST00000483561 C14orf93Q9H972 538 aaKnown RBP33.85■■■■□ 3.01
DENND4B-209ENST00000483561 TECPR2O15040 1411 aa33.85■■■■□ 3.01
DENND4B-209ENST00000483561 LAMC1P11047 1609 aa33.84■■■■□ 3.01
DENND4B-209ENST00000483561 SOCS7O14512 581 aa33.83■■■■□ 3.01
DENND4B-209ENST00000483561 DDX17Q92841 729 aaKnown RBP33.83■■■■□ 3.01
DENND4B-209ENST00000483561 YTHDC2Q9H6S0 1430 aaKnown RBP33.83■■■■□ 3.01
DENND4B-209ENST00000483561 ABCC11Q96J66 1382 aa33.83■■■■□ 3.01
DENND4B-209ENST00000483561 RGS17Q9UGC6 210 aaPredicted RBP33.82■■■■□ 3
DENND4B-209ENST00000483561 SHPRHQ149N8 1683 aa33.82■■■■□ 3
DENND4B-209ENST00000483561 PLEKHH1Q9ULM0 1364 aa33.82■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms