RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 RNF40O75150 1001 aa10.23□□□□□ -0.77
COPA-204ENST00000481522 LMOD2Q6P5Q4 547 aa10.23□□□□□ -0.77
COPA-204ENST00000481522 DNAJC5Q9H3Z4 198 aa10.23□□□□□ -0.77
COPA-204ENST00000481522 PLA2G2CQ5R387 149 aa10.22□□□□□ -0.77
COPA-204ENST00000481522 RBM33Q96EV2 1170 aaKnown RBP10.22□□□□□ -0.77
COPA-204ENST00000481522 TOR4AQ9NXH8 423 aa10.22□□□□□ -0.77
COPA-204ENST00000481522 TLL1O43897 1013 aa10.21□□□□□ -0.77
COPA-204ENST00000481522 PDE4AP27815 886 aa10.2□□□□□ -0.78
COPA-204ENST00000481522 NKX1-1Q15270 411 aaPredicted RBP10.2□□□□□ -0.78
COPA-204ENST00000481522 TRIM47Q96LD4 638 aa10.2□□□□□ -0.78
COPA-204ENST00000481522 S1PR4O95977 384 aa10.19□□□□□ -0.78
COPA-204ENST00000481522 KRTAP9-2Q9BYQ4 174 aa10.19□□□□□ -0.78
COPA-204ENST00000481522 ATP13A2Q9NQ11 1180 aa10.18□□□□□ -0.78
COPA-204ENST00000481522 FOXC1Q12948 553 aa10.17□□□□□ -0.78
COPA-204ENST00000481522 KCNMA1Q12791 1236 aa10.16□□□□□ -0.78
COPA-204ENST00000481522 TSR1Q2NL82 804 aaKnown RBP10.16□□□□□ -0.78
COPA-204ENST00000481522 TATDN2Q93075 761 aa10.15□□□□□ -0.78
COPA-204ENST00000481522 CDCA7LQ96GN5 454 aa10.15□□□□□ -0.78
COPA-204ENST00000481522 RTN4Q9NQC3 1192 aaKnown RBP10.15□□□□□ -0.78
COPA-204ENST00000481522 KRTAP9-6A0A140TA67 174 aa10.14□□□□□ -0.79
COPA-204ENST00000481522 DDX27Q96GQ7 796 aaKnown RBP10.14□□□□□ -0.79
COPA-204ENST00000481522 BLOC1S3Q6QNY0 202 aa10.13□□□□□ -0.79
COPA-204ENST00000481522 MFSD10Q14728 455 aa10.12□□□□□ -0.79
COPA-204ENST00000481522 SLC16A10Q8TF71 515 aa10.12□□□□□ -0.79
COPA-204ENST00000481522 NECTIN2Q92692 538 aa10.12□□□□□ -0.79
COPA-204ENST00000481522 PNMA3Q9UL41 463 aa10.12□□□□□ -0.79
COPA-204ENST00000481522 NBPF26B4DH59 902 aa10.11□□□□□ -0.79
COPA-204ENST00000481522 LARP6Q9BRS8 491 aaKnown RBP10.11□□□□□ -0.79
COPA-204ENST00000481522 PRSS12P56730 875 aa10.1□□□□□ -0.79
COPA-204ENST00000481522 SENP2Q9HC62 589 aa10.1□□□□□ -0.79
COPA-204ENST00000481522 PCDHB3Q9Y5E6 796 aa10.1□□□□□ -0.79
COPA-204ENST00000481522 EN1Q05925 392 aaPredicted RBP10.09□□□□□ -0.79
COPA-204ENST00000481522 KRTAP1-3Q8IUG1 177 aa10.06□□□□□ -0.8
COPA-204ENST00000481522 CYP4X1Q8N118 509 aa10.06□□□□□ -0.8
COPA-204ENST00000481522 IRF7Q92985 503 aa10.06□□□□□ -0.8
COPA-204ENST00000481522 NXF1Q9UBU9 619 aaKnown RBP10.06□□□□□ -0.8
COPA-204ENST00000481522 DCAF8L2P0C7V8 631 aa10.05□□□□□ -0.8
COPA-204ENST00000481522 SWT1Q5T5J6 900 aaKnown RBP10.05□□□□□ -0.8
COPA-204ENST00000481522 HDGFP51858 240 aaKnown RBP10.04□□□□□ -0.8
COPA-204ENST00000481522 SLF2Q8IX21 1173 aa10.04□□□□□ -0.8
COPA-204ENST00000481522 GTPBP6O43824 516 aaPredicted RBP10.03□□□□□ -0.8
COPA-204ENST00000481522 NUDT18Q6ZVK8 323 aa10.03□□□□□ -0.8
COPA-204ENST00000481522 ERBB4Q15303 1308 aa10.03□□□□□ -0.8
COPA-204ENST00000481522 MAP3K7O43318 606 aa10.02□□□□□ -0.81
COPA-204ENST00000481522 DDX12PQ92771 950 aa10.02□□□□□ -0.81
COPA-204ENST00000481522 KIFC2Q96AC6 838 aa10.02□□□□□ -0.81
COPA-204ENST00000481522 NPAS3Q8IXF0 933 aa10□□□□□ -0.81
COPA-204ENST00000481522 PRR14Q9BWN1 585 aa10□□□□□ -0.81
COPA-204ENST00000481522 ADH1BP00325 375 aa9.99□□□□□ -0.81
COPA-204ENST00000481522 TMEM151AQ8N4L1 468 aa9.99□□□□□ -0.81
COPA-204ENST00000481522 PSMG3-AS1Q96PY0 264 aa9.99□□□□□ -0.81
COPA-204ENST00000481522 H3BM21 787 aa9.97□□□□□ -0.81
COPA-204ENST00000481522 NBR1Q14596 966 aa9.97□□□□□ -0.81
COPA-204ENST00000481522 GDF11O95390 407 aa9.96□□□□□ -0.82
COPA-204ENST00000481522 SMPD1P17405 629 aa9.96□□□□□ -0.82
COPA-204ENST00000481522 RPIAP49247 311 aa9.95□□□□□ -0.82
COPA-204ENST00000481522 VEGFBP49765 207 aa9.95□□□□□ -0.82
COPA-204ENST00000481522 RASSF7Q02833 373 aa9.94□□□□□ -0.82
COPA-204ENST00000481522 SLC6A16Q9GZN6 736 aa9.94□□□□□ -0.82
COPA-204ENST00000481522 CERKQ8TCT0 537 aa9.93□□□□□ -0.82
COPA-204ENST00000481522 DPYSL4O14531 572 aa9.92□□□□□ -0.82
COPA-204ENST00000481522 TTC24A2A3L6 582 aaPredicted RBP9.91□□□□□ -0.82
COPA-204ENST00000481522 PRIM1P49642 420 aaKnown RBP9.89□□□□□ -0.83
COPA-204ENST00000481522 CAMK2BQ13554 666 aa9.88□□□□□ -0.83
COPA-204ENST00000481522 CADPS2Q86UW7 1296 aa9.88□□□□□ -0.83
COPA-204ENST00000481522 RBM27Q9P2N5 1060 aaKnown RBP9.88□□□□□ -0.83
COPA-204ENST00000481522 ACTN4O43707 911 aaKnown RBP9.85□□□□□ -0.83
COPA-204ENST00000481522 TTC13Q8NBP0 860 aa9.85□□□□□ -0.83
COPA-204ENST00000481522 J3QL48 77 aa9.83□□□□□ -0.84
COPA-204ENST00000481522 CD2BP2O95400 341 aaKnown RBP9.83□□□□□ -0.84
COPA-204ENST00000481522 GPAT2Q6NUI2 795 aa9.83□□□□□ -0.84
COPA-204ENST00000481522 HPS1Q92902 700 aa9.83□□□□□ -0.84
COPA-204ENST00000481522 SLC4A3P48751 1232 aa9.82□□□□□ -0.84
COPA-204ENST00000481522 SNIP1Q8TAD8 396 aaKnown RBP9.82□□□□□ -0.84
COPA-204ENST00000481522 IGHA1P01876 353 aa9.8□□□□□ -0.84
COPA-204ENST00000481522 CDHR5Q9HBB8 845 aa9.8□□□□□ -0.84
COPA-204ENST00000481522 VSIG8P0DPA2 414 aa9.79□□□□□ -0.84
COPA-204ENST00000481522 WNT7AO00755 349 aa9.77□□□□□ -0.85
COPA-204ENST00000481522 NR1I2O75469 434 aa9.77□□□□□ -0.85
COPA-204ENST00000481522 LCE3BQ5TA77 95 aa9.77□□□□□ -0.85
COPA-204ENST00000481522 EYA1Q99502 592 aa9.77□□□□□ -0.85
COPA-204ENST00000481522 FCF1Q9Y324 198 aaKnown RBP9.77□□□□□ -0.85
COPA-204ENST00000481522 RNF225M0QZC1 329 aaPredicted RBP9.76□□□□□ -0.85
COPA-204ENST00000481522 DNMT3AQ9Y6K1 912 aaPredicted RBP9.76□□□□□ -0.85
COPA-204ENST00000481522 KMT5BQ4FZB7 885 aa9.74□□□□□ -0.85
COPA-204ENST00000481522 ADAM23O75077 832 aa9.73□□□□□ -0.85
COPA-204ENST00000481522 PDIA6Q15084 440 aa9.73□□□□□ -0.85
COPA-204ENST00000481522 TRIM46Q7Z4K8 759 aa9.73□□□□□ -0.85
COPA-204ENST00000481522 BBXQ8WY36 941 aaPredicted RBP9.73□□□□□ -0.85
COPA-204ENST00000481522 PADI6Q6TGC4 694 aa9.72□□□□□ -0.85
COPA-204ENST00000481522 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.72□□□□□ -0.85
COPA-204ENST00000481522 SPDYE16A6NNV3 312 aaPredicted RBP9.71□□□□□ -0.86
COPA-204ENST00000481522 CFHP08603 1231 aa9.71□□□□□ -0.86
COPA-204ENST00000481522 SCUBE3Q8IX30 993 aa9.71□□□□□ -0.86
COPA-204ENST00000481522 SPSB2Q99619 263 aa9.71□□□□□ -0.86
COPA-204ENST00000481522 BMP1P13497 986 aa9.7□□□□□ -0.86
COPA-204ENST00000481522 MRGPRX2Q96LB1 330 aa9.7□□□□□ -0.86
COPA-204ENST00000481522 KRTAP4-12Q9BQ66 201 aa9.69□□□□□ -0.86
COPA-204ENST00000481522 KRTAP9-9Q9BYP9 154 aa9.69□□□□□ -0.86
COPA-204ENST00000481522 KRTAP9-4Q9BYQ2 154 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms