RNA–Protein interactions for RNA: ENST00000480432.5

RFC2-207, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-207ENST00000480432 SLC52A1Q9NWF4 448 aa29.6■■■□□ 2.33
RFC2-207ENST00000480432 NKTRP30414 1462 aaKnown RBP29.59■■■□□ 2.33
RFC2-207ENST00000480432 SLC26A8Q96RN1 970 aa29.58■■■□□ 2.33
RFC2-207ENST00000480432 ROBO1Q9Y6N7 1651 aa29.56■■■□□ 2.32
RFC2-207ENST00000480432 MYO5BQ9ULV0 1848 aa29.55■■■□□ 2.32
RFC2-207ENST00000480432 PROSER2Q86WR7 435 aaPredicted RBP29.53■■■□□ 2.32
RFC2-207ENST00000480432 RGS17Q9UGC6 210 aaPredicted RBP29.53■■■□□ 2.32
RFC2-207ENST00000480432 ZFYVE9O95405 1425 aa29.53■■■□□ 2.32
RFC2-207ENST00000480432 GCC2Q8IWJ2 1684 aa29.52■■■□□ 2.32
RFC2-207ENST00000480432 TMEM131LA2VDJ0 1609 aa29.5■■■□□ 2.31
RFC2-207ENST00000480432 UNC13BO14795 1591 aa29.5■■■□□ 2.31
RFC2-207ENST00000480432 CHD2O14647 1828 aaKnown RBP29.5■■■□□ 2.31
RFC2-207ENST00000480432 PLEKHG1Q9ULL1 1385 aa29.48■■■□□ 2.31
RFC2-207ENST00000480432 RBM33Q96EV2 1170 aaKnown RBP29.46■■■□□ 2.31
RFC2-207ENST00000480432 RIMS2Q9UQ26 1411 aa29.45■■■□□ 2.3
RFC2-207ENST00000480432 MSH6P52701 1360 aa29.44■■■□□ 2.3
RFC2-207ENST00000480432 BCANQ96GW7 911 aa29.42■■■□□ 2.3
RFC2-207ENST00000480432 E9PCH4 1651 aa29.41■■■□□ 2.3
RFC2-207ENST00000480432 HDGFP51858 240 aaKnown RBP29.4■■■□□ 2.3
RFC2-207ENST00000480432 NAIPQ13075 1403 aa29.38■■■□□ 2.29
RFC2-207ENST00000480432 PHLPP1O60346 1717 aa29.38■■■□□ 2.29
RFC2-207ENST00000480432 IQGAP3Q86VI3 1631 aa29.38■■■□□ 2.29
RFC2-207ENST00000480432 PPP1R15AO75807 674 aaPredicted RBP29.37■■■□□ 2.29
RFC2-207ENST00000480432 SLAIN2Q9P270 581 aa29.37■■■□□ 2.29
RFC2-207ENST00000480432 NUP155O75694 1391 aa29.37■■■□□ 2.29
RFC2-207ENST00000480432 TBX22Q9Y458 520 aa29.36■■■□□ 2.29
RFC2-207ENST00000480432 NCOA3Q9Y6Q9 1424 aa29.36■■■□□ 2.29
RFC2-207ENST00000480432 DIP2AQ14689 1571 aa29.35■■■□□ 2.29
RFC2-207ENST00000480432 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.34■■■□□ 2.29
RFC2-207ENST00000480432 HFM1A2PYH4 1435 aa29.34■■■□□ 2.29
RFC2-207ENST00000480432 ADAMTS13Q76LX8 1427 aa29.33■■■□□ 2.29
RFC2-207ENST00000480432 POTEAQ6S8J7 498 aa29.32■■■□□ 2.28
RFC2-207ENST00000480432 COL16A1Q07092 1604 aaPredicted RBP29.3■■■□□ 2.28
RFC2-207ENST00000480432 PIK3R4Q99570 1358 aa29.29■■■□□ 2.28
RFC2-207ENST00000480432 JCADQ9P266 1359 aa29.29■■■□□ 2.28
RFC2-207ENST00000480432 CHGAP10645 457 aaKnown RBP29.27■■■□□ 2.28
RFC2-207ENST00000480432 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.26■■■□□ 2.27
RFC2-207ENST00000480432 TRPM2O94759 1503 aa29.23■■■□□ 2.27
RFC2-207ENST00000480432 AHDC1Q5TGY3 1603 aaPredicted RBP29.21■■■□□ 2.27
RFC2-207ENST00000480432 NUTM2DQ5VT03 806 aaPredicted RBP29.21■■■□□ 2.27
RFC2-207ENST00000480432 C19orf44Q9H6X5 657 aa29.2■■■□□ 2.26
RFC2-207ENST00000480432 CADPS2Q86UW7 1296 aa29.19■■■□□ 2.26
RFC2-207ENST00000480432 C14orf37Q86TY3 774 aa29.18■■■□□ 2.26
RFC2-207ENST00000480432 SPHKAPQ2M3C7 1700 aa29.17■■■□□ 2.26
RFC2-207ENST00000480432 NRXN3Q9Y4C0 1643 aa29.16■■■□□ 2.26
RFC2-207ENST00000480432 SHPRHQ149N8 1683 aa29.16■■■□□ 2.26
RFC2-207ENST00000480432 PTPRUQ92729 1446 aa29.16■■■□□ 2.26
RFC2-207ENST00000480432 SPATA31A6Q5VVP1 1343 aa29.16■■■□□ 2.26
RFC2-207ENST00000480432 LRP6O75581 1613 aa29.15■■■□□ 2.26
RFC2-207ENST00000480432 SETD1AO15047 1707 aaKnown RBP29.14■■■□□ 2.26
RFC2-207ENST00000480432 XRN1Q8IZH2 1706 aaKnown RBP29.14■■■□□ 2.26
RFC2-207ENST00000480432 SETBP1Q9Y6X0 1596 aa29.14■■■□□ 2.26
RFC2-207ENST00000480432 ATF3P18847 181 aa29.14■■■□□ 2.26
RFC2-207ENST00000480432 TRIM52Q96A61 297 aa29.13■■■□□ 2.25
RFC2-207ENST00000480432 AMOTL2Q9Y2J4 779 aa29.13■■■□□ 2.25
RFC2-207ENST00000480432 DCCP43146 1447 aa29.11■■■□□ 2.25
RFC2-207ENST00000480432 ACIN1Q9UKV3 1341 aaKnown RBP29.09■■■□□ 2.25
RFC2-207ENST00000480432 BRINP3Q76B58 766 aa29.05■■■□□ 2.24
RFC2-207ENST00000480432 SLC4A1APQ9BWU0 796 aaKnown RBP29.05■■■□□ 2.24
RFC2-207ENST00000480432 SETD5Q9C0A6 1442 aa29.03■■■□□ 2.24
RFC2-207ENST00000480432 ASXL1Q8IXJ9 1541 aa29.03■■■□□ 2.24
RFC2-207ENST00000480432 ZNF772Q68DY9 489 aaPredicted RBP29.02■■■□□ 2.24
RFC2-207ENST00000480432 CLTCL1P53675 1640 aa29.02■■■□□ 2.24
RFC2-207ENST00000480432 NHSL1Q5SYE7 1610 aa29.02■■■□□ 2.24
RFC2-207ENST00000480432 MEX3CQ5U5Q3 659 aaKnown RBP29.01■■■□□ 2.23
RFC2-207ENST00000480432 MST1RQ04912 1400 aa29.01■■■□□ 2.23
RFC2-207ENST00000480432 NEXMIFQ5QGS0 1516 aa29■■■□□ 2.23
RFC2-207ENST00000480432 METP08581 1390 aa29■■■□□ 2.23
RFC2-207ENST00000480432 ZNF326Q5BKZ1 582 aaKnown RBP28.97■■■□□ 2.23
RFC2-207ENST00000480432 ADGRL3Q9HAR2 1447 aa28.95■■■□□ 2.23
RFC2-207ENST00000480432 KIF1BO60333 1816 aa28.95■■■□□ 2.23
RFC2-207ENST00000480432 NALCNQ8IZF0 1738 aa28.94■■■□□ 2.22
RFC2-207ENST00000480432 MPHOSPH9Q99550 1183 aa28.94■■■□□ 2.22
RFC2-207ENST00000480432 RAB3GAP2Q9H2M9 1393 aa28.9■■■□□ 2.22
RFC2-207ENST00000480432 CDK12Q9NYV4 1490 aaPredicted RBP28.89■■■□□ 2.22
RFC2-207ENST00000480432 HRCP23327 699 aa28.88■■■□□ 2.21
RFC2-207ENST00000480432 NUTM2BA6NNL0 878 aaPredicted RBP28.87■■■□□ 2.21
RFC2-207ENST00000480432 NUTM2EB1AL46 878 aaPredicted RBP28.87■■■□□ 2.21
RFC2-207ENST00000480432 NUTM2AQ8IVF1 878 aaPredicted RBP28.87■■■□□ 2.21
RFC2-207ENST00000480432 LRRC59Q96AG4 307 aaKnown RBP28.86■■■□□ 2.21
RFC2-207ENST00000480432 LAMC1P11047 1609 aa28.85■■■□□ 2.21
RFC2-207ENST00000480432 RXRBP28702 533 aa28.85■■■□□ 2.21
RFC2-207ENST00000480432 FOXD1Q16676 465 aa28.85■■■□□ 2.21
RFC2-207ENST00000480432 UPF1Q92900 1129 aaKnown RBP eCLIP28.85■■■□□ 2.21
RFC2-207ENST00000480432 PTCH1Q13635 1447 aa28.84■■■□□ 2.21
RFC2-207ENST00000480432 AFF2P51816 1311 aa28.83■■■□□ 2.21
RFC2-207ENST00000480432 PNPLA6Q8IY17 1366 aa28.83■■■□□ 2.21
RFC2-207ENST00000480432 PRAG1Q86YV5 1406 aa28.82■■■□□ 2.2
RFC2-207ENST00000480432 C1orf167Q5SNV9 1468 aa28.8■■■□□ 2.2
RFC2-207ENST00000480432 DDX17Q92841 729 aaKnown RBP28.79■■■□□ 2.2
RFC2-207ENST00000480432 VGFO15240 615 aaPredicted RBP28.78■■■□□ 2.2
RFC2-207ENST00000480432 RPGRIP1LQ68CZ1 1315 aa28.77■■■□□ 2.2
RFC2-207ENST00000480432 ROBO2Q9HCK4 1378 aa28.76■■■□□ 2.2
RFC2-207ENST00000480432 PPLO60437 1756 aa28.76■■■□□ 2.19
RFC2-207ENST00000480432 CCDC144AA2RUR9 1427 aa28.76■■■□□ 2.19
RFC2-207ENST00000480432 C8orf37Q96NL8 207 aa28.72■■■□□ 2.19
RFC2-207ENST00000480432 SOS2Q07890 1332 aaPredicted RBP28.7■■■□□ 2.19
RFC2-207ENST00000480432 RGS12O14924 1447 aa28.69■■■□□ 2.18
RFC2-207ENST00000480432 RBM6P78332 1123 aaKnown RBP28.68■■■□□ 2.18
RFC2-207ENST00000480432 QTRT2Q9H974 415 aaKnown RBP28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms