RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 IFT172Q9UG01 1749 aa15.81■□□□□ 0.12
APTX-223ENST00000479656 MYOM2P54296 1465 aa15.81■□□□□ 0.12
APTX-223ENST00000479656 VGFO15240 615 aaPredicted RBP15.8■□□□□ 0.12
APTX-223ENST00000479656 CFAP70Q5T0N1 1121 aa15.8■□□□□ 0.12
APTX-223ENST00000479656 MYO5BQ9ULV0 1848 aa15.79■□□□□ 0.12
APTX-223ENST00000479656 DIEXFQ68CQ4 756 aaKnown RBP15.79■□□□□ 0.12
APTX-223ENST00000479656 USP47Q96K76 1375 aa15.79■□□□□ 0.12
APTX-223ENST00000479656 PPLO60437 1756 aa15.79■□□□□ 0.12
APTX-223ENST00000479656 ADAMTSL3P82987 1691 aa15.78■□□□□ 0.12
APTX-223ENST00000479656 NEXMIFQ5QGS0 1516 aa15.78■□□□□ 0.12
APTX-223ENST00000479656 A2ML1A8K2U0 1454 aa15.78■□□□□ 0.12
APTX-223ENST00000479656 RIMS1Q86UR5 1692 aaKnown RBP15.77■□□□□ 0.12
APTX-223ENST00000479656 NRXN1Q9ULB1 1477 aa15.77■□□□□ 0.12
APTX-223ENST00000479656 GPRASP1Q5JY77 1395 aa15.77■□□□□ 0.12
APTX-223ENST00000479656 SENP3Q9H4L4 574 aaPredicted RBP15.76■□□□□ 0.11
APTX-223ENST00000479656 C14orf93Q9H972 538 aaKnown RBP15.75■□□□□ 0.11
APTX-223ENST00000479656 ST20-MTHFSA0A0A6YYL1 179 aa15.74■□□□□ 0.11
APTX-223ENST00000479656 C11orf95C9JLR9 678 aaPredicted RBP15.74■□□□□ 0.11
APTX-223ENST00000479656 PIK3C2GO75747 1445 aa15.73■□□□□ 0.11
APTX-223ENST00000479656 ZFYVE9O95405 1425 aa15.73■□□□□ 0.11
APTX-223ENST00000479656 NLRP1Q9C000 1473 aa15.73■□□□□ 0.11
APTX-223ENST00000479656 RIMS2Q9UQ26 1411 aa15.72■□□□□ 0.11
APTX-223ENST00000479656 DDX10Q13206 875 aaKnown RBP15.71■□□□□ 0.11
APTX-223ENST00000479656 KIAA1210Q9ULL0 1709 aa15.71■□□□□ 0.11
APTX-223ENST00000479656 LAMC1P11047 1609 aa15.71■□□□□ 0.11
APTX-223ENST00000479656 HDGFP51858 240 aaKnown RBP15.7■□□□□ 0.1
APTX-223ENST00000479656 TMEM132EQ6IEE7 984 aa15.7■□□□□ 0.1
APTX-223ENST00000479656 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.7■□□□□ 0.1
APTX-223ENST00000479656 WASHC2AQ641Q2 1341 aa15.7■□□□□ 0.1
APTX-223ENST00000479656 UBR1Q8IWV7 1749 aa15.7■□□□□ 0.1
APTX-223ENST00000479656 TMEM2Q9UHN6 1383 aa15.68■□□□□ 0.1
APTX-223ENST00000479656 KDM5AP29375 1690 aaKnown RBP15.67■□□□□ 0.1
APTX-223ENST00000479656 SCAF11Q99590 1463 aaKnown RBP15.67■□□□□ 0.1
APTX-223ENST00000479656 THEMISQ8N1K5 641 aaPredicted RBP15.67■□□□□ 0.1
APTX-223ENST00000479656 PTPRMP28827 1452 aa15.66■□□□□ 0.1
APTX-223ENST00000479656 LTKP29376 864 aa15.65■□□□□ 0.1
APTX-223ENST00000479656 KIF7Q2M1P5 1343 aa15.65■□□□□ 0.1
APTX-223ENST00000479656 CCDC7Q96M83 1385 aa15.65■□□□□ 0.1
APTX-223ENST00000479656 MYO3AQ8NEV4 1616 aa15.65■□□□□ 0.1
APTX-223ENST00000479656 TXNDC2Q86VQ3 553 aa15.65■□□□□ 0.1
APTX-223ENST00000479656 TESK2Q96S53 571 aa15.65■□□□□ 0.1
APTX-223ENST00000479656 TRAK1Q9UPV9 953 aa15.65■□□□□ 0.1
APTX-223ENST00000479656 SETBP1Q9Y6X0 1596 aa15.64■□□□□ 0.09
APTX-223ENST00000479656 IQGAP1P46940 1657 aa15.64■□□□□ 0.09
APTX-223ENST00000479656 BCANQ96GW7 911 aa15.64■□□□□ 0.09
APTX-223ENST00000479656 ADGRB1O14514 1584 aa15.64■□□□□ 0.09
APTX-223ENST00000479656 POLR3GLQ9BT43 218 aa15.63■□□□□ 0.09
APTX-223ENST00000479656 EID1Q9Y6B2 187 aa15.63■□□□□ 0.09
APTX-223ENST00000479656 ALKQ9UM73 1620 aa15.62■□□□□ 0.09
APTX-223ENST00000479656 STK26Q9P289 416 aa15.61■□□□□ 0.09
APTX-223ENST00000479656 EIF3AQ14152 1382 aaKnown RBP15.61■□□□□ 0.09
APTX-223ENST00000479656 CEP170BQ9Y4F5 1589 aaPredicted RBP15.61■□□□□ 0.09
APTX-223ENST00000479656 KDM4FA0A1W2PPD8 638 aa15.61■□□□□ 0.09
APTX-223ENST00000479656 SETD1BQ9UPS6 1966 aaKnown RBP15.6■□□□□ 0.09
APTX-223ENST00000479656 SLIT1O75093 1534 aa15.6■□□□□ 0.09
APTX-223ENST00000479656 ARHGAP23Q9P227 1491 aa15.6■□□□□ 0.09
APTX-223ENST00000479656 TMF1P82094 1093 aa15.59■□□□□ 0.09
APTX-223ENST00000479656 MIER1Q8N108 512 aa15.59■□□□□ 0.09
APTX-223ENST00000479656 ASXL1Q8IXJ9 1541 aa15.58■□□□□ 0.09
APTX-223ENST00000479656 DISP3Q9P2K9 1392 aa15.57■□□□□ 0.08
APTX-223ENST00000479656 PLEKHG1Q9ULL1 1385 aa15.57■□□□□ 0.08
APTX-223ENST00000479656 CENPJQ9HC77 1338 aaPredicted RBP15.57■□□□□ 0.08
APTX-223ENST00000479656 POLR1AO95602 1720 aaPredicted RBP15.57■□□□□ 0.08
APTX-223ENST00000479656 NRXN3Q9Y4C0 1643 aa15.57■□□□□ 0.08
APTX-223ENST00000479656 YTHDC2Q9H6S0 1430 aaKnown RBP15.56■□□□□ 0.08
APTX-223ENST00000479656 METP08581 1390 aa15.56■□□□□ 0.08
APTX-223ENST00000479656 SLC26A8Q96RN1 970 aa15.55■□□□□ 0.08
APTX-223ENST00000479656 ADAMTS13Q76LX8 1427 aa15.55■□□□□ 0.08
APTX-223ENST00000479656 ANKLE2Q86XL3 938 aa15.54■□□□□ 0.08
APTX-223ENST00000479656 ZNF142P52746 1687 aaPredicted RBP15.54■□□□□ 0.08
APTX-223ENST00000479656 SETD1AO15047 1707 aaKnown RBP15.54■□□□□ 0.08
APTX-223ENST00000479656 SLC24A1O60721 1099 aa15.53■□□□□ 0.08
APTX-223ENST00000479656 SAFB2Q14151 953 aaKnown RBP eCLIP15.53■□□□□ 0.08
APTX-223ENST00000479656 PRAM1Q96QH2 718 aa15.52■□□□□ 0.08
APTX-223ENST00000479656 LRPPRCP42704 1394 aaKnown RBP15.52■□□□□ 0.08
APTX-223ENST00000479656 POGKQ9P215 609 aa15.52■□□□□ 0.07
APTX-223ENST00000479656 CDCA8Q53HL2 280 aa15.51■□□□□ 0.07
APTX-223ENST00000479656 TBX22Q9Y458 520 aa15.51■□□□□ 0.07
APTX-223ENST00000479656 ARHGEF28Q8N1W1 1705 aaKnown RBP15.51■□□□□ 0.07
APTX-223ENST00000479656 ABCC11Q96J66 1382 aa15.51■□□□□ 0.07
APTX-223ENST00000479656 WAPLQ7Z5K2 1190 aa15.5■□□□□ 0.07
APTX-223ENST00000479656 MED14O60244 1454 aa15.5■□□□□ 0.07
APTX-223ENST00000479656 SBNO2Q9Y2G9 1366 aa15.5■□□□□ 0.07
APTX-223ENST00000479656 QRICH2Q9H0J4 1663 aa15.49■□□□□ 0.07
APTX-223ENST00000479656 ANP32CO43423 234 aa15.48■□□□□ 0.07
APTX-223ENST00000479656 NCKAP5LQ9HCH0 1330 aa15.48■□□□□ 0.07
APTX-223ENST00000479656 MINK1Q8N4C8 1332 aaPredicted RBP15.47■□□□□ 0.07
APTX-223ENST00000479656 PLEKHH1Q9ULM0 1364 aa15.46■□□□□ 0.07
APTX-223ENST00000479656 DLC1Q96QB1 1528 aa15.46■□□□□ 0.07
APTX-223ENST00000479656 SIRT1Q96EB6 747 aa15.46■□□□□ 0.06
APTX-223ENST00000479656 AMOTL2Q9Y2J4 779 aa15.46■□□□□ 0.06
APTX-223ENST00000479656 PTPRUQ92729 1446 aa15.45■□□□□ 0.06
APTX-223ENST00000479656 EVC2Q86UK5 1308 aa15.45■□□□□ 0.06
APTX-223ENST00000479656 PANK3Q9H999 370 aa15.44■□□□□ 0.06
APTX-223ENST00000479656 HSPA2P54652 639 aa15.44■□□□□ 0.06
APTX-223ENST00000479656 TECPR2O15040 1411 aa15.43■□□□□ 0.06
APTX-223ENST00000479656 ROBO2Q9HCK4 1378 aa15.43■□□□□ 0.06
APTX-223ENST00000479656 CABP2Q9NPB3 220 aa15.43■□□□□ 0.06
APTX-223ENST00000479656 NPHP4O75161 1426 aaPredicted RBP15.42■□□□□ 0.06
APTX-223ENST00000479656 CNGB1Q14028 1251 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms