RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, humanhuman

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-222ENST00000479596 XIRP1Q702N8 1843 aaKnown RBP22.76■■□□□ 1.23
CCNL1-222ENST00000479596 TOM1O60784 492 aa22.76■■□□□ 1.23
CCNL1-222ENST00000479596 NWD1Q149M9 1564 aa22.75■■□□□ 1.23
CCNL1-222ENST00000479596 CHGAP10645 457 aaKnown RBP22.74■■□□□ 1.23
CCNL1-222ENST00000479596 PIP4K2BP78356 416 aa22.74■■□□□ 1.23
CCNL1-222ENST00000479596 KCNA6P17658 529 aa22.72■■□□□ 1.23
CCNL1-222ENST00000479596 SENP3Q9H4L4 574 aaPredicted RBP22.72■■□□□ 1.23
CCNL1-222ENST00000479596 TRPM2O94759 1503 aa22.71■■□□□ 1.23
CCNL1-222ENST00000479596 CLTCL1P53675 1640 aa22.71■■□□□ 1.23
CCNL1-222ENST00000479596 PPP1R15AO75807 674 aaPredicted RBP22.7■■□□□ 1.22
CCNL1-222ENST00000479596 SCAF1Q9H7N4 1312 aaKnown RBP22.7■■□□□ 1.22
CCNL1-222ENST00000479596 ADAMTS13Q76LX8 1427 aa22.69■■□□□ 1.22
CCNL1-222ENST00000479596 NUTM2DQ5VT03 806 aaPredicted RBP22.69■■□□□ 1.22
CCNL1-222ENST00000479596 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.69■■□□□ 1.22
CCNL1-222ENST00000479596 NKTRP30414 1462 aaKnown RBP22.68■■□□□ 1.22
CCNL1-222ENST00000479596 TMEM94Q12767 1356 aa22.68■■□□□ 1.22
CCNL1-222ENST00000479596 HSPA1LP34931 641 aa22.68■■□□□ 1.22
CCNL1-222ENST00000479596 HDGFP51858 240 aaKnown RBP22.68■■□□□ 1.22
CCNL1-222ENST00000479596 BCANQ96GW7 911 aa22.67■■□□□ 1.22
CCNL1-222ENST00000479596 DIP2AQ14689 1571 aa22.65■■□□□ 1.22
CCNL1-222ENST00000479596 CHD2O14647 1828 aaKnown RBP22.65■■□□□ 1.22
CCNL1-222ENST00000479596 TRIM52Q96A61 297 aa22.64■■□□□ 1.21
CCNL1-222ENST00000479596 TBX22Q9Y458 520 aa22.64■■□□□ 1.21
CCNL1-222ENST00000479596 RBM33Q96EV2 1170 aaKnown RBP22.63■■□□□ 1.21
CCNL1-222ENST00000479596 DISP3Q9P2K9 1392 aa22.63■■□□□ 1.21
CCNL1-222ENST00000479596 NRXN3Q9Y4C0 1643 aa22.62■■□□□ 1.21
CCNL1-222ENST00000479596 PROSER2Q86WR7 435 aaPredicted RBP22.61■■□□□ 1.21
CCNL1-222ENST00000479596 NEXMIFQ5QGS0 1516 aa22.61■■□□□ 1.21
CCNL1-222ENST00000479596 SLC4A1APQ9BWU0 796 aaKnown RBP22.6■■□□□ 1.21
CCNL1-222ENST00000479596 SETBP1Q9Y6X0 1596 aa22.59■■□□□ 1.21
CCNL1-222ENST00000479596 PIK3R4Q99570 1358 aa22.58■■□□□ 1.21
CCNL1-222ENST00000479596 PTPRUQ92729 1446 aa22.57■■□□□ 1.2
CCNL1-222ENST00000479596 ZNF326Q5BKZ1 582 aaKnown RBP22.56■■□□□ 1.2
CCNL1-222ENST00000479596 KIF1BO60333 1816 aa22.56■■□□□ 1.2
CCNL1-222ENST00000479596 FOXD1Q16676 465 aa22.54■■□□□ 1.2
CCNL1-222ENST00000479596 FAM135BQ49AJ0 1406 aa22.53■■□□□ 1.2
CCNL1-222ENST00000479596 XRN1Q8IZH2 1706 aaKnown RBP22.51■■□□□ 1.19
CCNL1-222ENST00000479596 ILDR2Q71H61 639 aa22.51■■□□□ 1.19
CCNL1-222ENST00000479596 MSH6P52701 1360 aa22.5■■□□□ 1.19
CCNL1-222ENST00000479596 MED1Q15648 1581 aaPredicted RBP22.5■■□□□ 1.19
CCNL1-222ENST00000479596 NCOA3Q9Y6Q9 1424 aa22.5■■□□□ 1.19
CCNL1-222ENST00000479596 METP08581 1390 aa22.5■■□□□ 1.19
CCNL1-222ENST00000479596 SETD5Q9C0A6 1442 aa22.49■■□□□ 1.19
CCNL1-222ENST00000479596 ROBO1Q9Y6N7 1651 aa22.49■■□□□ 1.19
CCNL1-222ENST00000479596 MPHOSPH9Q99550 1183 aa22.49■■□□□ 1.19
CCNL1-222ENST00000479596 AMOTL2Q9Y2J4 779 aa22.48■■□□□ 1.19
CCNL1-222ENST00000479596 SETD1AO15047 1707 aaKnown RBP22.45■■□□□ 1.18
CCNL1-222ENST00000479596 PPLO60437 1756 aa22.45■■□□□ 1.18
CCNL1-222ENST00000479596 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.43■■□□□ 1.18
CCNL1-222ENST00000479596 CCDC144AA2RUR9 1427 aa22.43■■□□□ 1.18
CCNL1-222ENST00000479596 SPATA31E1Q6ZUB1 1445 aa22.43■■□□□ 1.18
CCNL1-222ENST00000479596 RPGRIP1LQ68CZ1 1315 aa22.43■■□□□ 1.18
CCNL1-222ENST00000479596 SLAIN2Q9P270 581 aa22.43■■□□□ 1.18
CCNL1-222ENST00000479596 RAB3GAP2Q9H2M9 1393 aa22.42■■□□□ 1.18
CCNL1-222ENST00000479596 VGFO15240 615 aaPredicted RBP22.4■■□□□ 1.18
CCNL1-222ENST00000479596 C19orf44Q9H6X5 657 aa22.4■■□□□ 1.18
CCNL1-222ENST00000479596 C14orf37Q86TY3 774 aa22.39■■□□□ 1.17
CCNL1-222ENST00000479596 ACIN1Q9UKV3 1341 aaKnown RBP22.38■■□□□ 1.17
CCNL1-222ENST00000479596 IFT172Q9UG01 1749 aa22.37■■□□□ 1.17
CCNL1-222ENST00000479596 DCCP43146 1447 aa22.36■■□□□ 1.17
CCNL1-222ENST00000479596 PRAG1Q86YV5 1406 aa22.35■■□□□ 1.17
CCNL1-222ENST00000479596 CADPS2Q86UW7 1296 aa22.35■■□□□ 1.17
CCNL1-222ENST00000479596 PTCH1Q13635 1447 aa22.34■■□□□ 1.17
CCNL1-222ENST00000479596 ADGRF5Q8IZF2 1346 aa22.33■■□□□ 1.17
CCNL1-222ENST00000479596 ADGRL3Q9HAR2 1447 aa22.33■■□□□ 1.17
CCNL1-222ENST00000479596 ATF3P18847 181 aa22.33■■□□□ 1.17
CCNL1-222ENST00000479596 PHLPP1O60346 1717 aa22.33■■□□□ 1.17
CCNL1-222ENST00000479596 NALCNQ8IZF0 1738 aa22.33■■□□□ 1.17
CCNL1-222ENST00000479596 COL16A1Q07092 1604 aaPredicted RBP22.32■■□□□ 1.16
CCNL1-222ENST00000479596 RGL3Q3MIN7 710 aa22.32■■□□□ 1.16
CCNL1-222ENST00000479596 ROBO2Q9HCK4 1378 aa22.32■■□□□ 1.16
CCNL1-222ENST00000479596 MST1RQ04912 1400 aa22.31■■□□□ 1.16
CCNL1-222ENST00000479596 ANKRD30BQ9BXX2 1392 aa22.3■■□□□ 1.16
CCNL1-222ENST00000479596 AHDC1Q5TGY3 1603 aaPredicted RBP22.3■■□□□ 1.16
CCNL1-222ENST00000479596 PIK3C2GO75747 1445 aa22.28■■□□□ 1.16
CCNL1-222ENST00000479596 ASXL1Q8IXJ9 1541 aa22.27■■□□□ 1.16
CCNL1-222ENST00000479596 BRINP3Q76B58 766 aa22.27■■□□□ 1.16
CCNL1-222ENST00000479596 SOCS7O14512 581 aa22.26■■□□□ 1.15
CCNL1-222ENST00000479596 NRXN1Q9ULB1 1477 aa22.24■■□□□ 1.15
CCNL1-222ENST00000479596 HRCP23327 699 aa22.24■■□□□ 1.15
CCNL1-222ENST00000479596 PHF23Q9BUL5 403 aaPredicted RBP22.24■■□□□ 1.15
CCNL1-222ENST00000479596 JCADQ9P266 1359 aa22.24■■□□□ 1.15
CCNL1-222ENST00000479596 RGS17Q9UGC6 210 aaPredicted RBP22.22■■□□□ 1.15
CCNL1-222ENST00000479596 TECPR2O15040 1411 aa22.22■■□□□ 1.15
CCNL1-222ENST00000479596 MYOM2P54296 1465 aa22.22■■□□□ 1.15
CCNL1-222ENST00000479596 NHSL1Q5SYE7 1610 aa22.2■■□□□ 1.15
CCNL1-222ENST00000479596 LRPPRCP42704 1394 aaKnown RBP22.2■■□□□ 1.14
CCNL1-222ENST00000479596 C1orf167Q5SNV9 1468 aa22.19■■□□□ 1.14
CCNL1-222ENST00000479596 KNDC1Q76NI1 1749 aa22.17■■□□□ 1.14
CCNL1-222ENST00000479596 TMEM132EQ6IEE7 984 aa22.17■■□□□ 1.14
CCNL1-222ENST00000479596 SHPRHQ149N8 1683 aa22.17■■□□□ 1.14
CCNL1-222ENST00000479596 LRP6O75581 1613 aa22.17■■□□□ 1.14
CCNL1-222ENST00000479596 ABCC11Q96J66 1382 aa22.16■■□□□ 1.14
CCNL1-222ENST00000479596 STK26Q9P289 416 aa22.15■■□□□ 1.14
CCNL1-222ENST00000479596 CDC42BPGQ6DT37 1551 aa22.15■■□□□ 1.14
CCNL1-222ENST00000479596 YTHDC2Q9H6S0 1430 aaKnown RBP22.14■■□□□ 1.14
CCNL1-222ENST00000479596 PLEKHH1Q9ULM0 1364 aa22.14■■□□□ 1.14
CCNL1-222ENST00000479596 C14orf93Q9H972 538 aaKnown RBP22.14■■□□□ 1.13
CCNL1-222ENST00000479596 LAMC1P11047 1609 aa22.13■■□□□ 1.13
CCNL1-222ENST00000479596 DDX17Q92841 729 aaKnown RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms