RNA–Protein interactions for RNA: ENST00000478954.1

STRADBP1-201, Transcript of STE20-related kinase adaptor beta pseudogene 1, humanhuman

BASIC

Gene STRADBP1, Length 1,281 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBP1-201ENST00000478954 PXYLP1Q8TE99 480 aa10.41□□□□□ -0.74
STRADBP1-201ENST00000478954 NLRP7Q8WX94 980 aa10.41□□□□□ -0.74
STRADBP1-201ENST00000478954 MYT1LQ9UL68 1186 aa10.41□□□□□ -0.74
STRADBP1-201ENST00000478954 METTL3Q86U44 580 aaKnown RBP10.4□□□□□ -0.74
STRADBP1-201ENST00000478954 NBPF3Q9H094 633 aa10.39□□□□□ -0.75
STRADBP1-201ENST00000478954 ERCC6Q03468 1493 aa10.38□□□□□ -0.75
STRADBP1-201ENST00000478954 RNF166Q96A37 237 aaPredicted RBP10.38□□□□□ -0.75
STRADBP1-201ENST00000478954 KDM4CQ9H3R0 1056 aa10.38□□□□□ -0.75
STRADBP1-201ENST00000478954 MRPL50Q8N5N7 158 aaKnown RBP10.37□□□□□ -0.75
STRADBP1-201ENST00000478954 TRIM66O15016 1216 aa10.36□□□□□ -0.75
STRADBP1-201ENST00000478954 FAM98CQ17RN3 349 aaKnown RBP10.36□□□□□ -0.75
STRADBP1-201ENST00000478954 RBM46Q8TBY0 533 aaKnown RBP10.36□□□□□ -0.75
STRADBP1-201ENST00000478954 ZMYND15Q9H091 742 aa10.36□□□□□ -0.75
STRADBP1-201ENST00000478954 RCCD1A6NED2 376 aa10.35□□□□□ -0.75
STRADBP1-201ENST00000478954 OATP04181 439 aa10.35□□□□□ -0.75
STRADBP1-201ENST00000478954 UBTFP17480 764 aaKnown RBP10.35□□□□□ -0.75
STRADBP1-201ENST00000478954 PDE4DQ08499 809 aa10.34□□□□□ -0.75
STRADBP1-201ENST00000478954 LAPTM4BQ86VI4 370 aa10.34□□□□□ -0.75
STRADBP1-201ENST00000478954 ZFRQ96KR1 1074 aaKnown RBP10.34□□□□□ -0.75
STRADBP1-201ENST00000478954 DNAJB2P25686 324 aa10.31□□□□□ -0.76
STRADBP1-201ENST00000478954 SWT1Q5T5J6 900 aaKnown RBP10.31□□□□□ -0.76
STRADBP1-201ENST00000478954 SAMD7Q7Z3H4 446 aa10.31□□□□□ -0.76
STRADBP1-201ENST00000478954 REPIN1Q9BWE0 567 aaKnown RBP10.31□□□□□ -0.76
STRADBP1-201ENST00000478954 TMEM134Q9H6X4 195 aa10.31□□□□□ -0.76
STRADBP1-201ENST00000478954 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.3□□□□□ -0.76
STRADBP1-201ENST00000478954 AMHR2Q16671 573 aa10.3□□□□□ -0.76
STRADBP1-201ENST00000478954 STAC3Q96MF2 364 aa10.3□□□□□ -0.76
STRADBP1-201ENST00000478954 MDM2Q00987 491 aaPredicted RBP10.29□□□□□ -0.76
STRADBP1-201ENST00000478954 BCAMP50895 628 aa10.28□□□□□ -0.76
STRADBP1-201ENST00000478954 WNT2BQ93097 391 aa10.28□□□□□ -0.76
STRADBP1-201ENST00000478954 KCTD12Q96CX2 325 aaKnown RBP10.28□□□□□ -0.76
STRADBP1-201ENST00000478954 TMUB1Q9BVT8 246 aa10.28□□□□□ -0.76
STRADBP1-201ENST00000478954 RSPH6AQ9H0K4 717 aa10.28□□□□□ -0.76
STRADBP1-201ENST00000478954 MYO15BQ96JP2 1530 aa10.28□□□□□ -0.76
STRADBP1-201ENST00000478954 GOLGA8CPA6NN73 597 aa10.27□□□□□ -0.77
STRADBP1-201ENST00000478954 PARP9Q8IXQ6 854 aa10.27□□□□□ -0.77
STRADBP1-201ENST00000478954 FAM117AQ9C073 453 aa10.26□□□□□ -0.77
STRADBP1-201ENST00000478954 PODXL2Q9NZ53 605 aa10.26□□□□□ -0.77
STRADBP1-201ENST00000478954 ANKK1Q8NFD2 765 aa10.25□□□□□ -0.77
STRADBP1-201ENST00000478954 SOWAHBA6NEL2 793 aa10.24□□□□□ -0.77
STRADBP1-201ENST00000478954 TTLL12Q14166 644 aaPredicted RBP10.24□□□□□ -0.77
STRADBP1-201ENST00000478954 THSD4Q6ZMP0 1018 aa10.24□□□□□ -0.77
STRADBP1-201ENST00000478954 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.24□□□□□ -0.77
STRADBP1-201ENST00000478954 LRCH3Q96II8 777 aa10.23□□□□□ -0.77
STRADBP1-201ENST00000478954 GPCPD1Q9NPB8 672 aa10.23□□□□□ -0.77
STRADBP1-201ENST00000478954 RNF40O75150 1001 aa10.22□□□□□ -0.77
STRADBP1-201ENST00000478954 GIGYF2Q6Y7W6 1299 aaKnown RBP10.22□□□□□ -0.77
STRADBP1-201ENST00000478954 C1orf115Q9H7X2 142 aa10.22□□□□□ -0.77
STRADBP1-201ENST00000478954 PLEKHG3A1L390 1219 aa10.21□□□□□ -0.77
STRADBP1-201ENST00000478954 SLC10A3P09131 477 aa10.21□□□□□ -0.77
STRADBP1-201ENST00000478954 CLCN1P35523 988 aa10.21□□□□□ -0.77
STRADBP1-201ENST00000478954 FAM217BQ9NTX9 383 aaPredicted RBP10.2□□□□□ -0.78
STRADBP1-201ENST00000478954 HPS5Q9UPZ3 1129 aa10.2□□□□□ -0.78
STRADBP1-201ENST00000478954 THOC2Q8NI27 1593 aaKnown RBP10.19□□□□□ -0.78
STRADBP1-201ENST00000478954 DDX11L8A8MPP1 907 aa10.19□□□□□ -0.78
STRADBP1-201ENST00000478954 MS4A1P11836 297 aa10.19□□□□□ -0.78
STRADBP1-201ENST00000478954 SLF2Q8IX21 1173 aa10.18□□□□□ -0.78
STRADBP1-201ENST00000478954 WBP1LQ9NX94 342 aa10.18□□□□□ -0.78
STRADBP1-201ENST00000478954 HDGFP51858 240 aaKnown RBP10.17□□□□□ -0.78
STRADBP1-201ENST00000478954 PTPN5P54829 565 aa10.17□□□□□ -0.78
STRADBP1-201ENST00000478954 TRIM26Q12899 539 aaPredicted RBP10.17□□□□□ -0.78
STRADBP1-201ENST00000478954 CD46P15529 392 aa10.16□□□□□ -0.78
STRADBP1-201ENST00000478954 SSTR3P32745 418 aaPredicted RBP10.16□□□□□ -0.78
STRADBP1-201ENST00000478954 ARID3AQ99856 593 aa10.16□□□□□ -0.78
STRADBP1-201ENST00000478954 TSR3Q9UJK0 312 aaKnown RBP10.16□□□□□ -0.78
STRADBP1-201ENST00000478954 RDH13Q8NBN7 331 aa10.15□□□□□ -0.78
STRADBP1-201ENST00000478954 HCSTQ9UBK5 93 aa10.14□□□□□ -0.79
STRADBP1-201ENST00000478954 CFHP08603 1231 aa10.13□□□□□ -0.79
STRADBP1-201ENST00000478954 HRCP23327 699 aa10.13□□□□□ -0.79
STRADBP1-201ENST00000478954 APLP1P51693 650 aa10.13□□□□□ -0.79
STRADBP1-201ENST00000478954 PPP4CP60510 307 aa10.13□□□□□ -0.79
STRADBP1-201ENST00000478954 SULF1Q8IWU6 871 aa10.13□□□□□ -0.79
STRADBP1-201ENST00000478954 SCRIBQ14160 1630 aa10.13□□□□□ -0.79
STRADBP1-201ENST00000478954 ARID3CA6NKF2 412 aa10.12□□□□□ -0.79
STRADBP1-201ENST00000478954 DDRGK1Q96HY6 314 aa10.12□□□□□ -0.79
STRADBP1-201ENST00000478954 SLC4A3P48751 1232 aa10.1□□□□□ -0.79
STRADBP1-201ENST00000478954 NESP48681 1621 aa10.1□□□□□ -0.79
STRADBP1-201ENST00000478954 RIMBP3CA6NJZ7 1639 aa10.09□□□□□ -0.79
STRADBP1-201ENST00000478954 RIMBP3BA6NNM3 1639 aa10.09□□□□□ -0.79
STRADBP1-201ENST00000478954 RIMBP3Q9UFD9 1639 aa10.09□□□□□ -0.79
STRADBP1-201ENST00000478954 GCGRP47871 477 aa10.09□□□□□ -0.79
STRADBP1-201ENST00000478954 BEGAINQ9BUH8 593 aa10.09□□□□□ -0.79
STRADBP1-201ENST00000478954 BAZ1AQ9NRL2 1556 aaPredicted RBP10.07□□□□□ -0.8
STRADBP1-201ENST00000478954 APBB1O00213 710 aa10.07□□□□□ -0.8
STRADBP1-201ENST00000478954 FUT2Q10981 343 aa10.05□□□□□ -0.8
STRADBP1-201ENST00000478954 FLIIQ13045 1269 aa10.05□□□□□ -0.8
STRADBP1-201ENST00000478954 HLA-CQ95604 372 aa10.05□□□□□ -0.8
STRADBP1-201ENST00000478954 ACTN4O43707 911 aaKnown RBP10.04□□□□□ -0.8
STRADBP1-201ENST00000478954 PUS10Q3MIT2 529 aaKnown RBP10.04□□□□□ -0.8
STRADBP1-201ENST00000478954 KMT5BQ4FZB7 885 aa10.04□□□□□ -0.8
STRADBP1-201ENST00000478954 RSPH4AQ5TD94 716 aa10.04□□□□□ -0.8
STRADBP1-201ENST00000478954 NECTIN2Q92692 538 aa10.04□□□□□ -0.8
STRADBP1-201ENST00000478954 SPIRE2Q8WWL2 714 aa10.03□□□□□ -0.8
STRADBP1-201ENST00000478954 KDM4AO75164 1064 aa10.02□□□□□ -0.81
STRADBP1-201ENST00000478954 NYAP1Q6ZVC0 841 aa10.02□□□□□ -0.81
STRADBP1-201ENST00000478954 GOPCQ9HD26 462 aa10.02□□□□□ -0.81
STRADBP1-201ENST00000478954 GUCA2AQ02747 115 aa10.01□□□□□ -0.81
STRADBP1-201ENST00000478954 BLOC1S3Q6QNY0 202 aa10.01□□□□□ -0.81
STRADBP1-201ENST00000478954 TBC1D2Q9BYX2 928 aa10.01□□□□□ -0.81
STRADBP1-201ENST00000478954 PLA2G2EQ9NZK7 142 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms