RNA–Protein interactions for RNA: ENST00000478459.5

EPHB4-205, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 965 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-205ENST00000478459 PPP1R15AO75807 674 aaPredicted RBP28.81■■■□□ 2.2
EPHB4-205ENST00000478459 TRIM52Q96A61 297 aa28.81■■■□□ 2.2
EPHB4-205ENST00000478459 RIMS2Q9UQ26 1411 aa28.8■■■□□ 2.2
EPHB4-205ENST00000478459 SPHKAPQ2M3C7 1700 aa28.8■■■□□ 2.2
EPHB4-205ENST00000478459 RBM33Q96EV2 1170 aaKnown RBP28.78■■■□□ 2.2
EPHB4-205ENST00000478459 XIRP1Q702N8 1843 aaKnown RBP28.77■■■□□ 2.2
EPHB4-205ENST00000478459 TOM1O60784 492 aa28.76■■■□□ 2.19
EPHB4-205ENST00000478459 ZFYVE9O95405 1425 aa28.76■■■□□ 2.19
EPHB4-205ENST00000478459 ALKQ9UM73 1620 aa28.72■■■□□ 2.19
EPHB4-205ENST00000478459 HFM1A2PYH4 1435 aa28.71■■■□□ 2.19
EPHB4-205ENST00000478459 HSPA1LP34931 641 aa28.69■■■□□ 2.18
EPHB4-205ENST00000478459 CLTCL1P53675 1640 aa28.68■■■□□ 2.18
EPHB4-205ENST00000478459 PLEKHG1Q9ULL1 1385 aa28.67■■■□□ 2.18
EPHB4-205ENST00000478459 ZNF326Q5BKZ1 582 aaKnown RBP28.67■■■□□ 2.18
EPHB4-205ENST00000478459 DISP3Q9P2K9 1392 aa28.66■■■□□ 2.18
EPHB4-205ENST00000478459 KCNA6P17658 529 aa28.65■■■□□ 2.18
EPHB4-205ENST00000478459 HDGFP51858 240 aaKnown RBP28.65■■■□□ 2.18
EPHB4-205ENST00000478459 PROSER2Q86WR7 435 aaPredicted RBP28.65■■■□□ 2.18
EPHB4-205ENST00000478459 TMEM94Q12767 1356 aa28.63■■■□□ 2.17
EPHB4-205ENST00000478459 FOXD1Q16676 465 aa28.63■■■□□ 2.17
EPHB4-205ENST00000478459 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.63■■■□□ 2.17
EPHB4-205ENST00000478459 SLC4A1APQ9BWU0 796 aaKnown RBP28.63■■■□□ 2.17
EPHB4-205ENST00000478459 CHD2O14647 1828 aaKnown RBP28.62■■■□□ 2.17
EPHB4-205ENST00000478459 KIF1BO60333 1816 aa28.59■■■□□ 2.17
EPHB4-205ENST00000478459 TRPM2O94759 1503 aa28.59■■■□□ 2.17
EPHB4-205ENST00000478459 NWD1Q149M9 1564 aa28.58■■■□□ 2.17
EPHB4-205ENST00000478459 ADAMTS13Q76LX8 1427 aa28.57■■■□□ 2.16
EPHB4-205ENST00000478459 TBX22Q9Y458 520 aa28.53■■■□□ 2.16
EPHB4-205ENST00000478459 NKTRP30414 1462 aaKnown RBP28.52■■■□□ 2.16
EPHB4-205ENST00000478459 NRXN3Q9Y4C0 1643 aa28.51■■■□□ 2.15
EPHB4-205ENST00000478459 NEXMIFQ5QGS0 1516 aa28.49■■■□□ 2.15
EPHB4-205ENST00000478459 ILDR2Q71H61 639 aa28.48■■■□□ 2.15
EPHB4-205ENST00000478459 C14orf37Q86TY3 774 aa28.48■■■□□ 2.15
EPHB4-205ENST00000478459 DIP2AQ14689 1571 aa28.47■■■□□ 2.15
EPHB4-205ENST00000478459 PTPRUQ92729 1446 aa28.46■■■□□ 2.15
EPHB4-205ENST00000478459 MPHOSPH9Q99550 1183 aa28.44■■■□□ 2.14
EPHB4-205ENST00000478459 AMOTL2Q9Y2J4 779 aa28.44■■■□□ 2.14
EPHB4-205ENST00000478459 MSH6P52701 1360 aa28.44■■■□□ 2.14
EPHB4-205ENST00000478459 ROBO1Q9Y6N7 1651 aa28.42■■■□□ 2.14
EPHB4-205ENST00000478459 SETD5Q9C0A6 1442 aa28.42■■■□□ 2.14
EPHB4-205ENST00000478459 SETBP1Q9Y6X0 1596 aa28.41■■■□□ 2.14
EPHB4-205ENST00000478459 METP08581 1390 aa28.4■■■□□ 2.14
EPHB4-205ENST00000478459 MED1Q15648 1581 aaPredicted RBP28.39■■■□□ 2.14
EPHB4-205ENST00000478459 RGL3Q3MIN7 710 aa28.38■■■□□ 2.13
EPHB4-205ENST00000478459 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.37■■■□□ 2.13
EPHB4-205ENST00000478459 PPLO60437 1756 aa28.37■■■□□ 2.13
EPHB4-205ENST00000478459 RAB3GAP2Q9H2M9 1393 aa28.36■■■□□ 2.13
EPHB4-205ENST00000478459 PIK3R4Q99570 1358 aa28.35■■■□□ 2.13
EPHB4-205ENST00000478459 XRN1Q8IZH2 1706 aaKnown RBP28.35■■■□□ 2.13
EPHB4-205ENST00000478459 SLAIN2Q9P270 581 aa28.33■■■□□ 2.13
EPHB4-205ENST00000478459 CCDC144AA2RUR9 1427 aa28.33■■■□□ 2.13
EPHB4-205ENST00000478459 FAM135BQ49AJ0 1406 aa28.33■■■□□ 2.13
EPHB4-205ENST00000478459 VGFO15240 615 aaPredicted RBP28.29■■■□□ 2.12
EPHB4-205ENST00000478459 SETD1AO15047 1707 aaKnown RBP28.29■■■□□ 2.12
EPHB4-205ENST00000478459 ATF3P18847 181 aa28.28■■■□□ 2.12
EPHB4-205ENST00000478459 PHLPP1O60346 1717 aa28.27■■■□□ 2.12
EPHB4-205ENST00000478459 C19orf44Q9H6X5 657 aa28.25■■■□□ 2.11
EPHB4-205ENST00000478459 RPGRIP1LQ68CZ1 1315 aa28.24■■■□□ 2.11
EPHB4-205ENST00000478459 ADGRF5Q8IZF2 1346 aa28.24■■■□□ 2.11
EPHB4-205ENST00000478459 PHF23Q9BUL5 403 aaPredicted RBP28.24■■■□□ 2.11
EPHB4-205ENST00000478459 IFT172Q9UG01 1749 aa28.23■■■□□ 2.11
EPHB4-205ENST00000478459 NCOA3Q9Y6Q9 1424 aa28.22■■■□□ 2.11
EPHB4-205ENST00000478459 NALCNQ8IZF0 1738 aa28.21■■■□□ 2.11
EPHB4-205ENST00000478459 SPATA31E1Q6ZUB1 1445 aa28.21■■■□□ 2.11
EPHB4-205ENST00000478459 CADPS2Q86UW7 1296 aa28.21■■■□□ 2.11
EPHB4-205ENST00000478459 ROBO2Q9HCK4 1378 aa28.16■■■□□ 2.1
EPHB4-205ENST00000478459 STK26Q9P289 416 aa28.16■■■□□ 2.1
EPHB4-205ENST00000478459 TMEM132EQ6IEE7 984 aa28.13■■■□□ 2.09
EPHB4-205ENST00000478459 ADGRL3Q9HAR2 1447 aa28.12■■■□□ 2.09
EPHB4-205ENST00000478459 COL16A1Q07092 1604 aaPredicted RBP28.12■■■□□ 2.09
EPHB4-205ENST00000478459 BRINP3Q76B58 766 aa28.12■■■□□ 2.09
EPHB4-205ENST00000478459 MST1RQ04912 1400 aa28.1■■■□□ 2.09
EPHB4-205ENST00000478459 DDX17Q92841 729 aaKnown RBP28.1■■■□□ 2.09
EPHB4-205ENST00000478459 ANKRD30BQ9BXX2 1392 aa28.09■■■□□ 2.09
EPHB4-205ENST00000478459 ACIN1Q9UKV3 1341 aaKnown RBP28.08■■■□□ 2.09
EPHB4-205ENST00000478459 DCCP43146 1447 aa28.07■■■□□ 2.08
EPHB4-205ENST00000478459 PTCH1Q13635 1447 aa28.07■■■□□ 2.08
EPHB4-205ENST00000478459 ASXL1Q8IXJ9 1541 aa28.07■■■□□ 2.08
EPHB4-205ENST00000478459 SOCS7O14512 581 aa28.06■■■□□ 2.08
EPHB4-205ENST00000478459 AHDC1Q5TGY3 1603 aaPredicted RBP28.04■■■□□ 2.08
EPHB4-205ENST00000478459 WAPLQ7Z5K2 1190 aa28.04■■■□□ 2.08
EPHB4-205ENST00000478459 PIK3C2GO75747 1445 aa28.03■■■□□ 2.08
EPHB4-205ENST00000478459 JCADQ9P266 1359 aa28.03■■■□□ 2.08
EPHB4-205ENST00000478459 RGS17Q9UGC6 210 aaPredicted RBP28.03■■■□□ 2.08
EPHB4-205ENST00000478459 KDM2AQ9Y2K7 1162 aa28.02■■■□□ 2.08
EPHB4-205ENST00000478459 CFAP70Q5T0N1 1121 aa28.01■■■□□ 2.07
EPHB4-205ENST00000478459 NUTM2FA1L443 756 aa28■■■□□ 2.07
EPHB4-205ENST00000478459 PLEKHH1Q9ULM0 1364 aa27.99■■■□□ 2.07
EPHB4-205ENST00000478459 ORAI2Q96SN7 254 aa27.99■■■□□ 2.07
EPHB4-205ENST00000478459 NHSL1Q5SYE7 1610 aa27.99■■■□□ 2.07
EPHB4-205ENST00000478459 C1orf167Q5SNV9 1468 aa27.98■■■□□ 2.07
EPHB4-205ENST00000478459 NUTM2BA6NNL0 878 aaPredicted RBP27.97■■■□□ 2.07
EPHB4-205ENST00000478459 NUTM2EB1AL46 878 aaPredicted RBP27.97■■■□□ 2.07
EPHB4-205ENST00000478459 NUTM2AQ8IVF1 878 aaPredicted RBP27.97■■■□□ 2.07
EPHB4-205ENST00000478459 LRPPRCP42704 1394 aaKnown RBP27.96■■■□□ 2.07
EPHB4-205ENST00000478459 LRP6O75581 1613 aa27.96■■■□□ 2.07
EPHB4-205ENST00000478459 KNDC1Q76NI1 1749 aa27.95■■■□□ 2.06
EPHB4-205ENST00000478459 SHPRHQ149N8 1683 aa27.94■■■□□ 2.06
EPHB4-205ENST00000478459 YTHDC2Q9H6S0 1430 aaKnown RBP27.94■■■□□ 2.06
EPHB4-205ENST00000478459 DCAF11Q8TEB1 546 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms