RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 SLC19A1P41440 591 aa9.06□□□□□ -0.96
NSMCE4A-208ENST00000477289 EMID1Q96A84 441 aaPredicted RBP9.06□□□□□ -0.96
NSMCE4A-208ENST00000477289 RNF223E7ERA6 249 aa9.05□□□□□ -0.96
NSMCE4A-208ENST00000477289 PLCB2Q00722 1185 aa9.05□□□□□ -0.96
NSMCE4A-208ENST00000477289 PCDHB3Q9Y5E6 796 aa9.05□□□□□ -0.96
NSMCE4A-208ENST00000477289 SLC4A3P48751 1232 aa9.04□□□□□ -0.96
NSMCE4A-208ENST00000477289 PKDCCQ504Y2 493 aa9.04□□□□□ -0.96
NSMCE4A-208ENST00000477289 MYT1Q01538 1121 aa9.03□□□□□ -0.96
NSMCE4A-208ENST00000477289 BLOC1S3Q6QNY0 202 aa9.03□□□□□ -0.96
NSMCE4A-208ENST00000477289 EYA1Q99502 592 aa9.03□□□□□ -0.96
NSMCE4A-208ENST00000477289 PRR14Q9BWN1 585 aa9.03□□□□□ -0.96
NSMCE4A-208ENST00000477289 DGAT1O75907 488 aa9.02□□□□□ -0.97
NSMCE4A-208ENST00000477289 SPRYD7Q5W111 196 aa9.02□□□□□ -0.97
NSMCE4A-208ENST00000477289 ZNF598Q86UK7 904 aaKnown RBP9.01□□□□□ -0.97
NSMCE4A-208ENST00000477289 POTECB2RU33 542 aa9□□□□□ -0.97
NSMCE4A-208ENST00000477289 PRR20EP86478 221 aa9□□□□□ -0.97
NSMCE4A-208ENST00000477289 PRR20CP86479 221 aa9□□□□□ -0.97
NSMCE4A-208ENST00000477289 PRR20DP86480 221 aa9□□□□□ -0.97
NSMCE4A-208ENST00000477289 PRR20BP86481 221 aa9□□□□□ -0.97
NSMCE4A-208ENST00000477289 PRR20AP86496 221 aa9□□□□□ -0.97
NSMCE4A-208ENST00000477289 TLL1O43897 1013 aa8.99□□□□□ -0.97
NSMCE4A-208ENST00000477289 P3H3Q8IVL6 736 aa8.99□□□□□ -0.97
NSMCE4A-208ENST00000477289 ANKLE1Q8NAG6 615 aa8.99□□□□□ -0.97
NSMCE4A-208ENST00000477289 PPEF1O14829 653 aaPredicted RBP8.98□□□□□ -0.97
NSMCE4A-208ENST00000477289 SEMA3EO15041 775 aa8.98□□□□□ -0.97
NSMCE4A-208ENST00000477289 PTGDRQ13258 359 aa8.98□□□□□ -0.97
NSMCE4A-208ENST00000477289 LIAT1Q6ZQX7 453 aa8.97□□□□□ -0.97
NSMCE4A-208ENST00000477289 S1PR4O95977 384 aa8.96□□□□□ -0.98
NSMCE4A-208ENST00000477289 ZNF697Q5TEC3 545 aa8.96□□□□□ -0.98
NSMCE4A-208ENST00000477289 FAM187AA6NFU0 413 aa8.95□□□□□ -0.98
NSMCE4A-208ENST00000477289 GDF9O60383 454 aa8.94□□□□□ -0.98
NSMCE4A-208ENST00000477289 DNAJB2P25686 324 aa8.94□□□□□ -0.98
NSMCE4A-208ENST00000477289 TNFRSF10AO00220 468 aa8.93□□□□□ -0.98
NSMCE4A-208ENST00000477289 ACTN4O43707 911 aaKnown RBP8.93□□□□□ -0.98
NSMCE4A-208ENST00000477289 NUTM2FA1L443 756 aa8.92□□□□□ -0.98
NSMCE4A-208ENST00000477289 KMT5BQ4FZB7 885 aa8.92□□□□□ -0.98
NSMCE4A-208ENST00000477289 TMEM134Q9H6X4 195 aa8.91□□□□□ -0.98
NSMCE4A-208ENST00000477289 ADGRG1Q9Y653 693 aa8.91□□□□□ -0.98
NSMCE4A-208ENST00000477289 TESPA1A2RU30 521 aaPredicted RBP8.9□□□□□ -0.98
NSMCE4A-208ENST00000477289 ADH1BP00325 375 aa8.9□□□□□ -0.98
NSMCE4A-208ENST00000477289 CFHP08603 1231 aa8.9□□□□□ -0.98
NSMCE4A-208ENST00000477289 RBM46Q8TBY0 533 aaKnown RBP8.9□□□□□ -0.98
NSMCE4A-208ENST00000477289 ST8SIA5O15466 376 aa8.89□□□□□ -0.99
NSMCE4A-208ENST00000477289 FAM161AQ3B820 660 aa8.89□□□□□ -0.99
NSMCE4A-208ENST00000477289 TREML4Q6UXN2 200 aa8.89□□□□□ -0.99
NSMCE4A-208ENST00000477289 AAASQ9NRG9 546 aa8.89□□□□□ -0.99
NSMCE4A-208ENST00000477289 KDM2AQ9Y2K7 1162 aa8.89□□□□□ -0.99
NSMCE4A-208ENST00000477289 HAP1P54257 671 aaPredicted RBP8.88□□□□□ -0.99
NSMCE4A-208ENST00000477289 PLA2G2CQ5R387 149 aa8.88□□□□□ -0.99
NSMCE4A-208ENST00000477289 LCE2AQ5TA79 106 aaPredicted RBP8.88□□□□□ -0.99
NSMCE4A-208ENST00000477289 ABCC9O60706 1549 aa8.88□□□□□ -0.99
NSMCE4A-208ENST00000477289 RCCD1A6NED2 376 aa8.87□□□□□ -0.99
NSMCE4A-208ENST00000477289 FCHSD2O94868 740 aa8.87□□□□□ -0.99
NSMCE4A-208ENST00000477289 RBM26Q5T8P6 1007 aaKnown RBP8.87□□□□□ -0.99
NSMCE4A-208ENST00000477289 SLC6A16Q9GZN6 736 aa8.87□□□□□ -0.99
NSMCE4A-208ENST00000477289 NR1I2O75469 434 aa8.86□□□□□ -0.99
NSMCE4A-208ENST00000477289 SLC10A3P09131 477 aa8.86□□□□□ -0.99
NSMCE4A-208ENST00000477289 PKD2L1Q9P0L9 805 aa8.84□□□□□ -0.99
NSMCE4A-208ENST00000477289 GPR37O15354 613 aa8.83□□□□□ -1
NSMCE4A-208ENST00000477289 FOXC1Q12948 553 aa8.83□□□□□ -1
NSMCE4A-208ENST00000477289 SCUBE3Q8IX30 993 aa8.83□□□□□ -1
NSMCE4A-208ENST00000477289 LMOD2Q6P5Q4 547 aa8.82□□□□□ -1
NSMCE4A-208ENST00000477289 FECHP22830 423 aa8.81□□□□□ -1
NSMCE4A-208ENST00000477289 HIC1Q14526 733 aa8.81□□□□□ -1
NSMCE4A-208ENST00000477289 PXYLP1Q8TE99 480 aa8.81□□□□□ -1
NSMCE4A-208ENST00000477289 DACH1Q9UI36 760 aa8.81□□□□□ -1
NSMCE4A-208ENST00000477289 SMYD5Q6GMV2 418 aa8.8□□□□□ -1
NSMCE4A-208ENST00000477289 CRIPAKQ8N1N5 446 aa8.8□□□□□ -1
NSMCE4A-208ENST00000477289 SPSB2Q99619 263 aa8.8□□□□□ -1
NSMCE4A-208ENST00000477289 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.79□□□□□ -1
NSMCE4A-208ENST00000477289 PUS10Q3MIT2 529 aaKnown RBP8.79□□□□□ -1
NSMCE4A-208ENST00000477289 OATP04181 439 aa8.78□□□□□ -1
NSMCE4A-208ENST00000477289 GNPATO15228 680 aa8.77□□□□□ -1.01
NSMCE4A-208ENST00000477289 AVPP01185 164 aa8.77□□□□□ -1.01
NSMCE4A-208ENST00000477289 METTL3Q86U44 580 aaKnown RBP8.77□□□□□ -1.01
NSMCE4A-208ENST00000477289 TOR4AQ9NXH8 423 aa8.77□□□□□ -1.01
NSMCE4A-208ENST00000477289 WFS1O76024 890 aa8.76□□□□□ -1.01
NSMCE4A-208ENST00000477289 RPIAP49247 311 aa8.76□□□□□ -1.01
NSMCE4A-208ENST00000477289 GMPR2Q9P2T1 348 aaKnown RBP8.76□□□□□ -1.01
NSMCE4A-208ENST00000477289 C11orf95C9JLR9 678 aaPredicted RBP8.75□□□□□ -1.01
NSMCE4A-208ENST00000477289 AXIN1O15169 862 aa8.75□□□□□ -1.01
NSMCE4A-208ENST00000477289 CD2BP2O95400 341 aaKnown RBP8.74□□□□□ -1.01
NSMCE4A-208ENST00000477289 CYP4X1Q8N118 509 aa8.74□□□□□ -1.01
NSMCE4A-208ENST00000477289 CTC1Q2NKJ3 1217 aa8.73□□□□□ -1.01
NSMCE4A-208ENST00000477289 RSPH4AQ5TD94 716 aa8.73□□□□□ -1.01
NSMCE4A-208ENST00000477289 VSIG10Q8N0Z9 540 aa8.73□□□□□ -1.01
NSMCE4A-208ENST00000477289 FCF1Q9Y324 198 aaKnown RBP8.73□□□□□ -1.01
NSMCE4A-208ENST00000477289 NFX1Q12986 1120 aaKnown RBP8.72□□□□□ -1.01
NSMCE4A-208ENST00000477289 SMCPP49901 116 aaPredicted RBP8.71□□□□□ -1.02
NSMCE4A-208ENST00000477289 NLRP7Q8WX94 980 aa8.71□□□□□ -1.02
NSMCE4A-208ENST00000477289 PHOX2BQ99453 314 aa8.71□□□□□ -1.02
NSMCE4A-208ENST00000477289 GPIHBP1Q8IV16 184 aa8.7□□□□□ -1.02
NSMCE4A-208ENST00000477289 THAP11Q96EK4 314 aa8.7□□□□□ -1.02
NSMCE4A-208ENST00000477289 STK17AQ9UEE5 414 aa8.7□□□□□ -1.02
NSMCE4A-208ENST00000477289 WIPF1O43516 503 aa8.69□□□□□ -1.02
NSMCE4A-208ENST00000477289 MORN1Q5T089 497 aa8.69□□□□□ -1.02
NSMCE4A-208ENST00000477289 DAXXQ9UER7 740 aaPredicted RBP8.69□□□□□ -1.02
NSMCE4A-208ENST00000477289 FAM160A2Q8N612 972 aaPredicted RBP8.68□□□□□ -1.02
NSMCE4A-208ENST00000477289 TTC24A2A3L6 582 aaPredicted RBP8.67□□□□□ -1.02
NSMCE4A-208ENST00000477289 FUT2Q10981 343 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms