RNA–Protein interactions for RNA: ENST00000477127.5

CCNL1-219, Transcript of cyclin L1, humanhuman

TSL 5

Gene CCNL1, Length 1,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-219ENST00000477127 FAM135BQ49AJ0 1406 aa20.57■□□□□ 0.88
CCNL1-219ENST00000477127 SLC26A8Q96RN1 970 aa20.56■□□□□ 0.88
CCNL1-219ENST00000477127 TMEM94Q12767 1356 aa20.56■□□□□ 0.88
CCNL1-219ENST00000477127 PROSER2Q86WR7 435 aaPredicted RBP20.55■□□□□ 0.88
CCNL1-219ENST00000477127 XIRP1Q702N8 1843 aaKnown RBP20.53■□□□□ 0.88
CCNL1-219ENST00000477127 BCANQ96GW7 911 aa20.53■□□□□ 0.88
CCNL1-219ENST00000477127 NKTRP30414 1462 aaKnown RBP20.53■□□□□ 0.88
CCNL1-219ENST00000477127 PLEKHG1Q9ULL1 1385 aa20.5■□□□□ 0.87
CCNL1-219ENST00000477127 ZFYVE9O95405 1425 aa20.49■□□□□ 0.87
CCNL1-219ENST00000477127 ROCK1Q13464 1354 aa20.49■□□□□ 0.87
CCNL1-219ENST00000477127 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.49■□□□□ 0.87
CCNL1-219ENST00000477127 NWD1Q149M9 1564 aa20.48■□□□□ 0.87
CCNL1-219ENST00000477127 PPP1R15AO75807 674 aaPredicted RBP20.48■□□□□ 0.87
CCNL1-219ENST00000477127 MSH6P52701 1360 aa20.47■□□□□ 0.87
CCNL1-219ENST00000477127 RIMS2Q9UQ26 1411 aa20.46■□□□□ 0.87
CCNL1-219ENST00000477127 TBX22Q9Y458 520 aa20.46■□□□□ 0.87
CCNL1-219ENST00000477127 UNC13BO14795 1591 aa20.45■□□□□ 0.86
CCNL1-219ENST00000477127 GCC2Q8IWJ2 1684 aa20.45■□□□□ 0.86
CCNL1-219ENST00000477127 TMEM131LA2VDJ0 1609 aa20.44■□□□□ 0.86
CCNL1-219ENST00000477127 NCOA3Q9Y6Q9 1424 aa20.43■□□□□ 0.86
CCNL1-219ENST00000477127 RBM33Q96EV2 1170 aaKnown RBP20.43■□□□□ 0.86
CCNL1-219ENST00000477127 SLAIN2Q9P270 581 aa20.43■□□□□ 0.86
CCNL1-219ENST00000477127 CHGAP10645 457 aaKnown RBP20.42■□□□□ 0.86
CCNL1-219ENST00000477127 CCER1Q8TC90 406 aaPredicted RBP20.42■□□□□ 0.86
CCNL1-219ENST00000477127 ROBO1Q9Y6N7 1651 aa20.41■□□□□ 0.86
CCNL1-219ENST00000477127 RGS17Q9UGC6 210 aaPredicted RBP20.39■□□□□ 0.85
CCNL1-219ENST00000477127 NUP155O75694 1391 aa20.38■□□□□ 0.85
CCNL1-219ENST00000477127 PIK3R4Q99570 1358 aa20.38■□□□□ 0.85
CCNL1-219ENST00000477127 CHD2O14647 1828 aaKnown RBP20.38■□□□□ 0.85
CCNL1-219ENST00000477127 IQGAP3Q86VI3 1631 aa20.38■□□□□ 0.85
CCNL1-219ENST00000477127 E9PCH4 1651 aa20.37■□□□□ 0.85
CCNL1-219ENST00000477127 MYO5BQ9ULV0 1848 aa20.36■□□□□ 0.85
CCNL1-219ENST00000477127 DIP2AQ14689 1571 aa20.36■□□□□ 0.85
CCNL1-219ENST00000477127 ADAMTS13Q76LX8 1427 aa20.34■□□□□ 0.85
CCNL1-219ENST00000477127 C14orf37Q86TY3 774 aa20.34■□□□□ 0.85
CCNL1-219ENST00000477127 C19orf44Q9H6X5 657 aa20.34■□□□□ 0.85
CCNL1-219ENST00000477127 CADPS2Q86UW7 1296 aa20.33■□□□□ 0.85
CCNL1-219ENST00000477127 JCADQ9P266 1359 aa20.33■□□□□ 0.84
CCNL1-219ENST00000477127 ITGAEP38570 1179 aa20.32■□□□□ 0.84
CCNL1-219ENST00000477127 NUTM2DQ5VT03 806 aaPredicted RBP20.31■□□□□ 0.84
CCNL1-219ENST00000477127 ATF3P18847 181 aa20.3■□□□□ 0.84
CCNL1-219ENST00000477127 TRPM2O94759 1503 aa20.29■□□□□ 0.84
CCNL1-219ENST00000477127 PHLPP1O60346 1717 aa20.29■□□□□ 0.84
CCNL1-219ENST00000477127 POTEAQ6S8J7 498 aa20.28■□□□□ 0.84
CCNL1-219ENST00000477127 RRBP1Q9P2E9 1410 aaKnown RBP20.28■□□□□ 0.84
CCNL1-219ENST00000477127 AMOTL2Q9Y2J4 779 aa20.28■□□□□ 0.84
CCNL1-219ENST00000477127 SPATA31A6Q5VVP1 1343 aa20.25■□□□□ 0.83
CCNL1-219ENST00000477127 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.23■□□□□ 0.83
CCNL1-219ENST00000477127 DCCP43146 1447 aa20.23■□□□□ 0.83
CCNL1-219ENST00000477127 ZNF326Q5BKZ1 582 aaKnown RBP20.23■□□□□ 0.83
CCNL1-219ENST00000477127 COL16A1Q07092 1604 aaPredicted RBP20.22■□□□□ 0.83
CCNL1-219ENST00000477127 PTPRUQ92729 1446 aa20.22■□□□□ 0.83
CCNL1-219ENST00000477127 SETBP1Q9Y6X0 1596 aa20.22■□□□□ 0.83
CCNL1-219ENST00000477127 SPHKAPQ2M3C7 1700 aa20.21■□□□□ 0.83
CCNL1-219ENST00000477127 AHDC1Q5TGY3 1603 aaPredicted RBP20.2■□□□□ 0.82
CCNL1-219ENST00000477127 ZNF772Q68DY9 489 aaPredicted RBP20.18■□□□□ 0.82
CCNL1-219ENST00000477127 BRINP3Q76B58 766 aa20.18■□□□□ 0.82
CCNL1-219ENST00000477127 MEX3CQ5U5Q3 659 aaKnown RBP20.17■□□□□ 0.82
CCNL1-219ENST00000477127 XRN1Q8IZH2 1706 aaKnown RBP20.16■□□□□ 0.82
CCNL1-219ENST00000477127 NRXN3Q9Y4C0 1643 aa20.16■□□□□ 0.82
CCNL1-219ENST00000477127 METP08581 1390 aa20.14■□□□□ 0.82
CCNL1-219ENST00000477127 NAIPQ13075 1403 aa20.14■□□□□ 0.81
CCNL1-219ENST00000477127 SHPRHQ149N8 1683 aa20.13■□□□□ 0.81
CCNL1-219ENST00000477127 VGFO15240 615 aaPredicted RBP20.12■□□□□ 0.81
CCNL1-219ENST00000477127 LRP6O75581 1613 aa20.12■□□□□ 0.81
CCNL1-219ENST00000477127 NEXMIFQ5QGS0 1516 aa20.11■□□□□ 0.81
CCNL1-219ENST00000477127 MST1RQ04912 1400 aa20.11■□□□□ 0.81
CCNL1-219ENST00000477127 LRRC59Q96AG4 307 aaKnown RBP20.11■□□□□ 0.81
CCNL1-219ENST00000477127 ASXL1Q8IXJ9 1541 aa20.11■□□□□ 0.81
CCNL1-219ENST00000477127 CLSPNQ9HAW4 1339 aa20.1■□□□□ 0.81
CCNL1-219ENST00000477127 CLTCL1P53675 1640 aa20.1■□□□□ 0.81
CCNL1-219ENST00000477127 SETD5Q9C0A6 1442 aa20.1■□□□□ 0.81
CCNL1-219ENST00000477127 ADGRL3Q9HAR2 1447 aa20.1■□□□□ 0.81
CCNL1-219ENST00000477127 RPGRIP1LQ68CZ1 1315 aa20.09■□□□□ 0.81
CCNL1-219ENST00000477127 TRIM52Q96A61 297 aa20.08■□□□□ 0.81
CCNL1-219ENST00000477127 HFM1A2PYH4 1435 aa20.06■□□□□ 0.8
CCNL1-219ENST00000477127 KIF1BO60333 1816 aa20.06■□□□□ 0.8
CCNL1-219ENST00000477127 NUTM2BA6NNL0 878 aaPredicted RBP20.05■□□□□ 0.8
CCNL1-219ENST00000477127 NUTM2EB1AL46 878 aaPredicted RBP20.05■□□□□ 0.8
CCNL1-219ENST00000477127 NUTM2AQ8IVF1 878 aaPredicted RBP20.05■□□□□ 0.8
CCNL1-219ENST00000477127 RXRBP28702 533 aa20.05■□□□□ 0.8
CCNL1-219ENST00000477127 SLC4A1APQ9BWU0 796 aaKnown RBP20.05■□□□□ 0.8
CCNL1-219ENST00000477127 NHSL1Q5SYE7 1610 aa20.04■□□□□ 0.8
CCNL1-219ENST00000477127 PTCH1Q13635 1447 aa20.04■□□□□ 0.8
CCNL1-219ENST00000477127 PRAG1Q86YV5 1406 aa20.02■□□□□ 0.79
CCNL1-219ENST00000477127 CDK12Q9NYV4 1490 aaPredicted RBP20■□□□□ 0.79
CCNL1-219ENST00000477127 NALCNQ8IZF0 1738 aa20■□□□□ 0.79
CCNL1-219ENST00000477127 AFF2P51816 1311 aa20■□□□□ 0.79
CCNL1-219ENST00000477127 C1orf167Q5SNV9 1468 aa20■□□□□ 0.79
CCNL1-219ENST00000477127 SETD1AO15047 1707 aaKnown RBP19.99■□□□□ 0.79
CCNL1-219ENST00000477127 ADRA2BP18089 450 aa19.99■□□□□ 0.79
CCNL1-219ENST00000477127 PNPLA6Q8IY17 1366 aa19.98■□□□□ 0.79
CCNL1-219ENST00000477127 UPF1Q92900 1129 aaKnown RBP eCLIP19.98■□□□□ 0.79
CCNL1-219ENST00000477127 ROBO2Q9HCK4 1378 aa19.97■□□□□ 0.79
CCNL1-219ENST00000477127 DDX17Q92841 729 aaKnown RBP19.96■□□□□ 0.79
CCNL1-219ENST00000477127 C8orf37Q96NL8 207 aa19.95■□□□□ 0.78
CCNL1-219ENST00000477127 DHX57Q6P158 1386 aaKnown RBP19.95■□□□□ 0.78
CCNL1-219ENST00000477127 SOS2Q07890 1332 aaPredicted RBP19.95■□□□□ 0.78
CCNL1-219ENST00000477127 LAMC1P11047 1609 aa19.94■□□□□ 0.78
CCNL1-219ENST00000477127 ORAI2Q96SN7 254 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms