RNA–Protein interactions for RNA: ENST00000477060.1

C1orf109-206, Transcript of chromosome 1 open reading frame 109, humanhuman

TSL 3

Gene C1orf109, Length 608 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf109-206ENST00000477060 BCANQ96GW7 911 aa24■■□□□ 1.43
C1orf109-206ENST00000477060 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.99■■□□□ 1.43
C1orf109-206ENST00000477060 SLC26A8Q96RN1 970 aa23.98■■□□□ 1.43
C1orf109-206ENST00000477060 SPHKAPQ2M3C7 1700 aa23.98■■□□□ 1.43
C1orf109-206ENST00000477060 PLEKHG1Q9ULL1 1385 aa23.97■■□□□ 1.43
C1orf109-206ENST00000477060 TRIM52Q96A61 297 aa23.96■■□□□ 1.43
C1orf109-206ENST00000477060 SCAF1Q9H7N4 1312 aaKnown RBP23.95■■□□□ 1.42
C1orf109-206ENST00000477060 KCNA6P17658 529 aa23.94■■□□□ 1.42
C1orf109-206ENST00000477060 PIP4K2BP78356 416 aa23.93■■□□□ 1.42
C1orf109-206ENST00000477060 TRPM2O94759 1503 aa23.9■■□□□ 1.42
C1orf109-206ENST00000477060 SLC4A1APQ9BWU0 796 aaKnown RBP23.88■■□□□ 1.41
C1orf109-206ENST00000477060 SENP3Q9H4L4 574 aaPredicted RBP23.88■■□□□ 1.41
C1orf109-206ENST00000477060 NKTRP30414 1462 aaKnown RBP23.87■■□□□ 1.41
C1orf109-206ENST00000477060 NWD1Q149M9 1564 aa23.87■■□□□ 1.41
C1orf109-206ENST00000477060 TBX22Q9Y458 520 aa23.87■■□□□ 1.41
C1orf109-206ENST00000477060 ALKQ9UM73 1620 aa23.86■■□□□ 1.41
C1orf109-206ENST00000477060 ZNF326Q5BKZ1 582 aaKnown RBP23.86■■□□□ 1.41
C1orf109-206ENST00000477060 NUTM2DQ5VT03 806 aaPredicted RBP23.86■■□□□ 1.41
C1orf109-206ENST00000477060 CLTCL1P53675 1640 aa23.85■■□□□ 1.41
C1orf109-206ENST00000477060 PROSER2Q86WR7 435 aaPredicted RBP23.85■■□□□ 1.41
C1orf109-206ENST00000477060 TMEM94Q12767 1356 aa23.85■■□□□ 1.41
C1orf109-206ENST00000477060 DIP2AQ14689 1571 aa23.85■■□□□ 1.41
C1orf109-206ENST00000477060 XIRP1Q702N8 1843 aaKnown RBP23.84■■□□□ 1.41
C1orf109-206ENST00000477060 ADAMTS13Q76LX8 1427 aa23.83■■□□□ 1.4
C1orf109-206ENST00000477060 CHD2O14647 1828 aaKnown RBP23.82■■□□□ 1.4
C1orf109-206ENST00000477060 PIK3R4Q99570 1358 aa23.81■■□□□ 1.4
C1orf109-206ENST00000477060 HSPA1LP34931 641 aa23.81■■□□□ 1.4
C1orf109-206ENST00000477060 ACIN1Q9UKV3 1341 aaKnown RBP23.81■■□□□ 1.4
C1orf109-206ENST00000477060 KIF1BO60333 1816 aa23.8■■□□□ 1.4
C1orf109-206ENST00000477060 DISP3Q9P2K9 1392 aa23.78■■□□□ 1.4
C1orf109-206ENST00000477060 NEXMIFQ5QGS0 1516 aa23.75■■□□□ 1.39
C1orf109-206ENST00000477060 SETBP1Q9Y6X0 1596 aa23.75■■□□□ 1.39
C1orf109-206ENST00000477060 RBM33Q96EV2 1170 aaKnown RBP23.75■■□□□ 1.39
C1orf109-206ENST00000477060 MSH6P52701 1360 aa23.75■■□□□ 1.39
C1orf109-206ENST00000477060 SETD5Q9C0A6 1442 aa23.75■■□□□ 1.39
C1orf109-206ENST00000477060 MPHOSPH9Q99550 1183 aa23.73■■□□□ 1.39
C1orf109-206ENST00000477060 NCOA3Q9Y6Q9 1424 aa23.72■■□□□ 1.39
C1orf109-206ENST00000477060 NRXN3Q9Y4C0 1643 aa23.72■■□□□ 1.39
C1orf109-206ENST00000477060 FOXD1Q16676 465 aa23.71■■□□□ 1.39
C1orf109-206ENST00000477060 FAM135BQ49AJ0 1406 aa23.7■■□□□ 1.38
C1orf109-206ENST00000477060 RPGRIP1LQ68CZ1 1315 aa23.7■■□□□ 1.38
C1orf109-206ENST00000477060 CCDC144AA2RUR9 1427 aa23.69■■□□□ 1.38
C1orf109-206ENST00000477060 VGFO15240 615 aaPredicted RBP23.69■■□□□ 1.38
C1orf109-206ENST00000477060 AMOTL2Q9Y2J4 779 aa23.69■■□□□ 1.38
C1orf109-206ENST00000477060 C14orf37Q86TY3 774 aa23.68■■□□□ 1.38
C1orf109-206ENST00000477060 PTPRUQ92729 1446 aa23.67■■□□□ 1.38
C1orf109-206ENST00000477060 RAB3GAP2Q9H2M9 1393 aa23.65■■□□□ 1.38
C1orf109-206ENST00000477060 METP08581 1390 aa23.64■■□□□ 1.37
C1orf109-206ENST00000477060 XRN1Q8IZH2 1706 aaKnown RBP23.63■■□□□ 1.37
C1orf109-206ENST00000477060 C19orf44Q9H6X5 657 aa23.62■■□□□ 1.37
C1orf109-206ENST00000477060 SLAIN2Q9P270 581 aa23.62■■□□□ 1.37
C1orf109-206ENST00000477060 ROBO1Q9Y6N7 1651 aa23.62■■□□□ 1.37
C1orf109-206ENST00000477060 PPLO60437 1756 aa23.61■■□□□ 1.37
C1orf109-206ENST00000477060 CADPS2Q86UW7 1296 aa23.6■■□□□ 1.37
C1orf109-206ENST00000477060 MED1Q15648 1581 aaPredicted RBP23.6■■□□□ 1.37
C1orf109-206ENST00000477060 ATF3P18847 181 aa23.59■■□□□ 1.37
C1orf109-206ENST00000477060 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.58■■□□□ 1.37
C1orf109-206ENST00000477060 SPATA31E1Q6ZUB1 1445 aa23.58■■□□□ 1.36
C1orf109-206ENST00000477060 RGL3Q3MIN7 710 aa23.56■■□□□ 1.36
C1orf109-206ENST00000477060 ANKRD30BQ9BXX2 1392 aa23.55■■□□□ 1.36
C1orf109-206ENST00000477060 DCCP43146 1447 aa23.55■■□□□ 1.36
C1orf109-206ENST00000477060 SETD1AO15047 1707 aaKnown RBP23.54■■□□□ 1.36
C1orf109-206ENST00000477060 HRCP23327 699 aa23.52■■□□□ 1.36
C1orf109-206ENST00000477060 ILDR2Q71H61 639 aa23.52■■□□□ 1.36
C1orf109-206ENST00000477060 PTCH1Q13635 1447 aa23.51■■□□□ 1.35
C1orf109-206ENST00000477060 IFT172Q9UG01 1749 aa23.5■■□□□ 1.35
C1orf109-206ENST00000477060 ADGRF5Q8IZF2 1346 aa23.5■■□□□ 1.35
C1orf109-206ENST00000477060 ADGRL3Q9HAR2 1447 aa23.5■■□□□ 1.35
C1orf109-206ENST00000477060 PRAG1Q86YV5 1406 aa23.49■■□□□ 1.35
C1orf109-206ENST00000477060 PHF23Q9BUL5 403 aaPredicted RBP23.48■■□□□ 1.35
C1orf109-206ENST00000477060 PHLPP1O60346 1717 aa23.47■■□□□ 1.35
C1orf109-206ENST00000477060 ROBO2Q9HCK4 1378 aa23.45■■□□□ 1.34
C1orf109-206ENST00000477060 NALCNQ8IZF0 1738 aa23.44■■□□□ 1.34
C1orf109-206ENST00000477060 PIK3C2GO75747 1445 aa23.43■■□□□ 1.34
C1orf109-206ENST00000477060 MST1RQ04912 1400 aa23.43■■□□□ 1.34
C1orf109-206ENST00000477060 AHDC1Q5TGY3 1603 aaPredicted RBP23.42■■□□□ 1.34
C1orf109-206ENST00000477060 BRINP3Q76B58 766 aa23.42■■□□□ 1.34
C1orf109-206ENST00000477060 JCADQ9P266 1359 aa23.41■■□□□ 1.34
C1orf109-206ENST00000477060 COL16A1Q07092 1604 aaPredicted RBP23.41■■□□□ 1.34
C1orf109-206ENST00000477060 MYOM2P54296 1465 aa23.4■■□□□ 1.34
C1orf109-206ENST00000477060 ASXL1Q8IXJ9 1541 aa23.38■■□□□ 1.33
C1orf109-206ENST00000477060 LRPPRCP42704 1394 aaKnown RBP23.38■■□□□ 1.33
C1orf109-206ENST00000477060 NRXN1Q9ULB1 1477 aa23.37■■□□□ 1.33
C1orf109-206ENST00000477060 TECPR2O15040 1411 aa23.37■■□□□ 1.33
C1orf109-206ENST00000477060 SOCS7O14512 581 aa23.37■■□□□ 1.33
C1orf109-206ENST00000477060 STK26Q9P289 416 aa23.36■■□□□ 1.33
C1orf109-206ENST00000477060 TMEM132EQ6IEE7 984 aa23.35■■□□□ 1.33
C1orf109-206ENST00000477060 ABCC11Q96J66 1382 aa23.35■■□□□ 1.33
C1orf109-206ENST00000477060 LAMC1P11047 1609 aa23.34■■□□□ 1.33
C1orf109-206ENST00000477060 C14orf93Q9H972 538 aaKnown RBP23.34■■□□□ 1.33
C1orf109-206ENST00000477060 C1orf167Q5SNV9 1468 aa23.34■■□□□ 1.33
C1orf109-206ENST00000477060 KNDC1Q76NI1 1749 aa23.33■■□□□ 1.33
C1orf109-206ENST00000477060 YTHDC2Q9H6S0 1430 aaKnown RBP23.33■■□□□ 1.32
C1orf109-206ENST00000477060 NHSL1Q5SYE7 1610 aa23.31■■□□□ 1.32
C1orf109-206ENST00000477060 CDC42BPGQ6DT37 1551 aa23.31■■□□□ 1.32
C1orf109-206ENST00000477060 SPATA31A6Q5VVP1 1343 aa23.31■■□□□ 1.32
C1orf109-206ENST00000477060 DHX57Q6P158 1386 aaKnown RBP23.3■■□□□ 1.32
C1orf109-206ENST00000477060 CFAP70Q5T0N1 1121 aa23.3■■□□□ 1.32
C1orf109-206ENST00000477060 SHPRHQ149N8 1683 aa23.29■■□□□ 1.32
C1orf109-206ENST00000477060 WAPLQ7Z5K2 1190 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 1208.5 ms