RNA–Protein interactions for RNA: ENST00000476862.1

ABCB1-204, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 3

Gene ABCB1, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-204ENST00000476862 MYO5BQ9ULV0 1848 aa27.18■■□□□ 1.94
ABCB1-204ENST00000476862 RIMS2Q9UQ26 1411 aa27.16■■□□□ 1.94
ABCB1-204ENST00000476862 KCNA6P17658 529 aa27.15■■□□□ 1.94
ABCB1-204ENST00000476862 SENP3Q9H4L4 574 aaPredicted RBP27.15■■□□□ 1.94
ABCB1-204ENST00000476862 TRIM52Q96A61 297 aa27.13■■□□□ 1.93
ABCB1-204ENST00000476862 TMEM131LA2VDJ0 1609 aa27.12■■□□□ 1.93
ABCB1-204ENST00000476862 PROSER2Q86WR7 435 aaPredicted RBP27.12■■□□□ 1.93
ABCB1-204ENST00000476862 HSPA1LP34931 641 aa27.11■■□□□ 1.93
ABCB1-204ENST00000476862 PLEKHG1Q9ULL1 1385 aa27.09■■□□□ 1.93
ABCB1-204ENST00000476862 NAIPQ13075 1403 aa27.08■■□□□ 1.93
ABCB1-204ENST00000476862 ZFYVE9O95405 1425 aa27.07■■□□□ 1.92
ABCB1-204ENST00000476862 ZNF326Q5BKZ1 582 aaKnown RBP27.07■■□□□ 1.92
ABCB1-204ENST00000476862 NUTM2DQ5VT03 806 aaPredicted RBP27.07■■□□□ 1.92
ABCB1-204ENST00000476862 SPHKAPQ2M3C7 1700 aa27.05■■□□□ 1.92
ABCB1-204ENST00000476862 TMEM94Q12767 1356 aa27.03■■□□□ 1.92
ABCB1-204ENST00000476862 TBX22Q9Y458 520 aa27.03■■□□□ 1.92
ABCB1-204ENST00000476862 HFM1A2PYH4 1435 aa27.01■■□□□ 1.91
ABCB1-204ENST00000476862 XIRP1Q702N8 1843 aaKnown RBP27■■□□□ 1.91
ABCB1-204ENST00000476862 SLC4A1APQ9BWU0 796 aaKnown RBP26.99■■□□□ 1.91
ABCB1-204ENST00000476862 NKTRP30414 1462 aaKnown RBP26.99■■□□□ 1.91
ABCB1-204ENST00000476862 RBM33Q96EV2 1170 aaKnown RBP26.98■■□□□ 1.91
ABCB1-204ENST00000476862 CHD2O14647 1828 aaKnown RBP26.97■■□□□ 1.91
ABCB1-204ENST00000476862 MSH6P52701 1360 aa26.97■■□□□ 1.91
ABCB1-204ENST00000476862 C14orf37Q86TY3 774 aa26.96■■□□□ 1.91
ABCB1-204ENST00000476862 ALKQ9UM73 1620 aa26.96■■□□□ 1.91
ABCB1-204ENST00000476862 NWD1Q149M9 1564 aa26.95■■□□□ 1.9
ABCB1-204ENST00000476862 DIP2AQ14689 1571 aa26.93■■□□□ 1.9
ABCB1-204ENST00000476862 KIF1BO60333 1816 aa26.93■■□□□ 1.9
ABCB1-204ENST00000476862 PIK3R4Q99570 1358 aa26.92■■□□□ 1.9
ABCB1-204ENST00000476862 TRPM2O94759 1503 aa26.9■■□□□ 1.9
ABCB1-204ENST00000476862 ADAMTS13Q76LX8 1427 aa26.89■■□□□ 1.89
ABCB1-204ENST00000476862 CLTCL1P53675 1640 aa26.87■■□□□ 1.89
ABCB1-204ENST00000476862 ILDR2Q71H61 639 aa26.87■■□□□ 1.89
ABCB1-204ENST00000476862 PHF23Q9BUL5 403 aaPredicted RBP26.87■■□□□ 1.89
ABCB1-204ENST00000476862 FAM135BQ49AJ0 1406 aa26.87■■□□□ 1.89
ABCB1-204ENST00000476862 AMOTL2Q9Y2J4 779 aa26.86■■□□□ 1.89
ABCB1-204ENST00000476862 ACIN1Q9UKV3 1341 aaKnown RBP26.86■■□□□ 1.89
ABCB1-204ENST00000476862 NCOA3Q9Y6Q9 1424 aa26.84■■□□□ 1.89
ABCB1-204ENST00000476862 SLAIN2Q9P270 581 aa26.84■■□□□ 1.89
ABCB1-204ENST00000476862 VGFO15240 615 aaPredicted RBP26.82■■□□□ 1.88
ABCB1-204ENST00000476862 ATF3P18847 181 aa26.82■■□□□ 1.88
ABCB1-204ENST00000476862 MED1Q15648 1581 aaPredicted RBP26.82■■□□□ 1.88
ABCB1-204ENST00000476862 CADPS2Q86UW7 1296 aa26.8■■□□□ 1.88
ABCB1-204ENST00000476862 C19orf44Q9H6X5 657 aa26.8■■□□□ 1.88
ABCB1-204ENST00000476862 ROBO1Q9Y6N7 1651 aa26.79■■□□□ 1.88
ABCB1-204ENST00000476862 RPGRIP1LQ68CZ1 1315 aa26.78■■□□□ 1.88
ABCB1-204ENST00000476862 SETBP1Q9Y6X0 1596 aa26.78■■□□□ 1.88
ABCB1-204ENST00000476862 MPHOSPH9Q99550 1183 aa26.77■■□□□ 1.88
ABCB1-204ENST00000476862 NEXMIFQ5QGS0 1516 aa26.76■■□□□ 1.87
ABCB1-204ENST00000476862 FOXD1Q16676 465 aa26.76■■□□□ 1.87
ABCB1-204ENST00000476862 SOCS7O14512 581 aa26.75■■□□□ 1.87
ABCB1-204ENST00000476862 CCDC144AA2RUR9 1427 aa26.73■■□□□ 1.87
ABCB1-204ENST00000476862 PTPRUQ92729 1446 aa26.73■■□□□ 1.87
ABCB1-204ENST00000476862 NRXN3Q9Y4C0 1643 aa26.72■■□□□ 1.87
ABCB1-204ENST00000476862 SETD5Q9C0A6 1442 aa26.71■■□□□ 1.87
ABCB1-204ENST00000476862 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.7■■□□□ 1.87
ABCB1-204ENST00000476862 METP08581 1390 aa26.7■■□□□ 1.86
ABCB1-204ENST00000476862 RGL3Q3MIN7 710 aa26.68■■□□□ 1.86
ABCB1-204ENST00000476862 PHLPP1O60346 1717 aa26.68■■□□□ 1.86
ABCB1-204ENST00000476862 XRN1Q8IZH2 1706 aaKnown RBP26.65■■□□□ 1.86
ABCB1-204ENST00000476862 PPLO60437 1756 aa26.63■■□□□ 1.85
ABCB1-204ENST00000476862 DCCP43146 1447 aa26.62■■□□□ 1.85
ABCB1-204ENST00000476862 JCADQ9P266 1359 aa26.59■■□□□ 1.85
ABCB1-204ENST00000476862 ANKRD30BQ9BXX2 1392 aa26.58■■□□□ 1.84
ABCB1-204ENST00000476862 RAB3GAP2Q9H2M9 1393 aa26.58■■□□□ 1.84
ABCB1-204ENST00000476862 BRINP3Q76B58 766 aa26.55■■□□□ 1.84
ABCB1-204ENST00000476862 ADGRL3Q9HAR2 1447 aa26.55■■□□□ 1.84
ABCB1-204ENST00000476862 ADGRF5Q8IZF2 1346 aa26.53■■□□□ 1.84
ABCB1-204ENST00000476862 PTCH1Q13635 1447 aa26.52■■□□□ 1.84
ABCB1-204ENST00000476862 SPATA31E1Q6ZUB1 1445 aa26.51■■□□□ 1.83
ABCB1-204ENST00000476862 MEX3CQ5U5Q3 659 aaKnown RBP26.51■■□□□ 1.83
ABCB1-204ENST00000476862 SETD1AO15047 1707 aaKnown RBP26.51■■□□□ 1.83
ABCB1-204ENST00000476862 COL16A1Q07092 1604 aaPredicted RBP26.5■■□□□ 1.83
ABCB1-204ENST00000476862 AHDC1Q5TGY3 1603 aaPredicted RBP26.5■■□□□ 1.83
ABCB1-204ENST00000476862 MST1RQ04912 1400 aa26.49■■□□□ 1.83
ABCB1-204ENST00000476862 SPATA31A6Q5VVP1 1343 aa26.49■■□□□ 1.83
ABCB1-204ENST00000476862 STK26Q9P289 416 aa26.49■■□□□ 1.83
ABCB1-204ENST00000476862 ROBO2Q9HCK4 1378 aa26.48■■□□□ 1.83
ABCB1-204ENST00000476862 NALCNQ8IZF0 1738 aa26.48■■□□□ 1.83
ABCB1-204ENST00000476862 IFT172Q9UG01 1749 aa26.45■■□□□ 1.83
ABCB1-204ENST00000476862 ASXL1Q8IXJ9 1541 aa26.45■■□□□ 1.83
ABCB1-204ENST00000476862 LRRC59Q96AG4 307 aaKnown RBP26.45■■□□□ 1.82
ABCB1-204ENST00000476862 HRCP23327 699 aa26.44■■□□□ 1.82
ABCB1-204ENST00000476862 RGS17Q9UGC6 210 aaPredicted RBP26.43■■□□□ 1.82
ABCB1-204ENST00000476862 TMEM132EQ6IEE7 984 aa26.42■■□□□ 1.82
ABCB1-204ENST00000476862 PRAG1Q86YV5 1406 aa26.41■■□□□ 1.82
ABCB1-204ENST00000476862 NUTM2BA6NNL0 878 aaPredicted RBP26.4■■□□□ 1.82
ABCB1-204ENST00000476862 NUTM2EB1AL46 878 aaPredicted RBP26.4■■□□□ 1.82
ABCB1-204ENST00000476862 NUTM2AQ8IVF1 878 aaPredicted RBP26.4■■□□□ 1.82
ABCB1-204ENST00000476862 C1orf167Q5SNV9 1468 aa26.4■■□□□ 1.82
ABCB1-204ENST00000476862 SHPRHQ149N8 1683 aa26.39■■□□□ 1.82
ABCB1-204ENST00000476862 LRPPRCP42704 1394 aaKnown RBP26.39■■□□□ 1.82
ABCB1-204ENST00000476862 PIK3C2GO75747 1445 aa26.39■■□□□ 1.81
ABCB1-204ENST00000476862 NHSL1Q5SYE7 1610 aa26.37■■□□□ 1.81
ABCB1-204ENST00000476862 WAPLQ7Z5K2 1190 aa26.37■■□□□ 1.81
ABCB1-204ENST00000476862 DHX57Q6P158 1386 aaKnown RBP26.36■■□□□ 1.81
ABCB1-204ENST00000476862 ABCC11Q96J66 1382 aa26.36■■□□□ 1.81
ABCB1-204ENST00000476862 DDX17Q92841 729 aaKnown RBP26.36■■□□□ 1.81
ABCB1-204ENST00000476862 C14orf93Q9H972 538 aaKnown RBP26.36■■□□□ 1.81
ABCB1-204ENST00000476862 POTEAQ6S8J7 498 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms