RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 CLCN1P35523 988 aa10.9□□□□□ -0.66
SSR3-206ENST00000476217 DAXXQ9UER7 740 aaPredicted RBP10.9□□□□□ -0.66
SSR3-206ENST00000476217 SAMD7Q7Z3H4 446 aa10.89□□□□□ -0.67
SSR3-206ENST00000476217 SULF1Q8IWU6 871 aa10.89□□□□□ -0.67
SSR3-206ENST00000476217 TRIM66O15016 1216 aa10.88□□□□□ -0.67
SSR3-206ENST00000476217 NYAP1Q6ZVC0 841 aa10.88□□□□□ -0.67
SSR3-206ENST00000476217 KCTD12Q96CX2 325 aaKnown RBP10.88□□□□□ -0.67
SSR3-206ENST00000476217 GPCPD1Q9NPB8 672 aa10.88□□□□□ -0.67
SSR3-206ENST00000476217 MMRN1Q13201 1228 aa10.87□□□□□ -0.67
SSR3-206ENST00000476217 SWT1Q5T5J6 900 aaKnown RBP10.87□□□□□ -0.67
SSR3-206ENST00000476217 THSD4Q6ZMP0 1018 aa10.87□□□□□ -0.67
SSR3-206ENST00000476217 PHOX2BQ99453 314 aa10.86□□□□□ -0.67
SSR3-206ENST00000476217 TSR3Q9UJK0 312 aaKnown RBP10.86□□□□□ -0.67
SSR3-206ENST00000476217 PRR14Q9BWN1 585 aa10.85□□□□□ -0.67
SSR3-206ENST00000476217 HCSTQ9UBK5 93 aa10.84□□□□□ -0.67
SSR3-206ENST00000476217 PPP4CP60510 307 aa10.83□□□□□ -0.68
SSR3-206ENST00000476217 TTLL12Q14166 644 aaPredicted RBP10.83□□□□□ -0.68
SSR3-206ENST00000476217 MDM2Q00987 491 aaPredicted RBP10.82□□□□□ -0.68
SSR3-206ENST00000476217 PDE4DQ08499 809 aa10.82□□□□□ -0.68
SSR3-206ENST00000476217 RNF40O75150 1001 aa10.81□□□□□ -0.68
SSR3-206ENST00000476217 BCAMP50895 628 aa10.81□□□□□ -0.68
SSR3-206ENST00000476217 TMUB1Q9BVT8 246 aa10.81□□□□□ -0.68
SSR3-206ENST00000476217 HPS5Q9UPZ3 1129 aa10.81□□□□□ -0.68
SSR3-206ENST00000476217 KMT5BQ4FZB7 885 aa10.78□□□□□ -0.68
SSR3-206ENST00000476217 DDX11L8A8MPP1 907 aa10.77□□□□□ -0.69
SSR3-206ENST00000476217 GIGYF2Q6Y7W6 1299 aaKnown RBP10.77□□□□□ -0.69
SSR3-206ENST00000476217 PARP9Q8IXQ6 854 aa10.77□□□□□ -0.69
SSR3-206ENST00000476217 RDH13Q8NBN7 331 aa10.77□□□□□ -0.69
SSR3-206ENST00000476217 FAM217BQ9NTX9 383 aaPredicted RBP10.77□□□□□ -0.69
SSR3-206ENST00000476217 PTPN5P54829 565 aa10.76□□□□□ -0.69
SSR3-206ENST00000476217 PRKCSHP14314 528 aaPredicted RBP10.75□□□□□ -0.69
SSR3-206ENST00000476217 NLRP7Q8WX94 980 aa10.75□□□□□ -0.69
SSR3-206ENST00000476217 CD46P15529 392 aa10.74□□□□□ -0.69
SSR3-206ENST00000476217 SSTR3P32745 418 aaPredicted RBP10.74□□□□□ -0.69
SSR3-206ENST00000476217 WBP1LQ9NX94 342 aa10.74□□□□□ -0.69
SSR3-206ENST00000476217 DIXDC1Q155Q3 683 aa10.73□□□□□ -0.69
SSR3-206ENST00000476217 CFHP08603 1231 aa10.72□□□□□ -0.69
SSR3-206ENST00000476217 SLC10A3P09131 477 aa10.72□□□□□ -0.69
SSR3-206ENST00000476217 REPIN1Q9BWE0 567 aaKnown RBP10.72□□□□□ -0.69
SSR3-206ENST00000476217 GCGRP47871 477 aa10.71□□□□□ -0.69
SSR3-206ENST00000476217 GRIPAP1Q4V328 841 aa10.71□□□□□ -0.69
SSR3-206ENST00000476217 USP46P62068 366 aa10.7□□□□□ -0.7
SSR3-206ENST00000476217 ACTN4O43707 911 aaKnown RBP10.69□□□□□ -0.7
SSR3-206ENST00000476217 NEUROD2Q15784 382 aa10.69□□□□□ -0.7
SSR3-206ENST00000476217 PLSCR2Q9NRY7 297 aa10.69□□□□□ -0.7
SSR3-206ENST00000476217 DDRGK1Q96HY6 314 aa10.68□□□□□ -0.7
SSR3-206ENST00000476217 KDM4CQ9H3R0 1056 aa10.68□□□□□ -0.7
SSR3-206ENST00000476217 APLP1P51693 650 aa10.67□□□□□ -0.7
SSR3-206ENST00000476217 NUTM1Q86Y26 1132 aa10.67□□□□□ -0.7
SSR3-206ENST00000476217 KDM4AO75164 1064 aa10.66□□□□□ -0.7
SSR3-206ENST00000476217 BEGAINQ9BUH8 593 aa10.66□□□□□ -0.7
SSR3-206ENST00000476217 MS4A1P11836 297 aa10.65□□□□□ -0.7
SSR3-206ENST00000476217 BRPF1P55201 1214 aaPredicted RBP10.65□□□□□ -0.7
SSR3-206ENST00000476217 PCDHB3Q9Y5E6 796 aa10.65□□□□□ -0.7
SSR3-206ENST00000476217 ATP6V1AP38606 617 aa10.64□□□□□ -0.71
SSR3-206ENST00000476217 RSPH6AQ9H0K4 717 aa10.63□□□□□ -0.71
SSR3-206ENST00000476217 GPBP1L1Q9HC44 474 aaPredicted RBP10.63□□□□□ -0.71
SSR3-206ENST00000476217 NR1I2O75469 434 aa10.62□□□□□ -0.71
SSR3-206ENST00000476217 ITGBL1O95965 494 aaPredicted RBP10.61□□□□□ -0.71
SSR3-206ENST00000476217 FUT2Q10981 343 aa10.61□□□□□ -0.71
SSR3-206ENST00000476217 IL21Q9HBE4 155 aa10.61□□□□□ -0.71
SSR3-206ENST00000476217 GJA5P36382 358 aa10.6□□□□□ -0.71
SSR3-206ENST00000476217 IFFO2Q5TF58 517 aa10.59□□□□□ -0.71
SSR3-206ENST00000476217 KCNC4Q03721 635 aa10.58□□□□□ -0.72
SSR3-206ENST00000476217 SPIRE2Q8WWL2 714 aa10.58□□□□□ -0.72
SSR3-206ENST00000476217 MTRQ99707 1265 aa10.58□□□□□ -0.72
SSR3-206ENST00000476217 HOXA2O43364 376 aa10.57□□□□□ -0.72
SSR3-206ENST00000476217 Q3C1V9 767 aa10.57□□□□□ -0.72
SSR3-206ENST00000476217 MORN1Q5T089 497 aa10.57□□□□□ -0.72
SSR3-206ENST00000476217 SALL2Q9Y467 1007 aaPredicted RBP10.57□□□□□ -0.72
SSR3-206ENST00000476217 TJAP1Q5JTD0 557 aa10.56□□□□□ -0.72
SSR3-206ENST00000476217 TBC1D2Q9BYX2 928 aa10.56□□□□□ -0.72
SSR3-206ENST00000476217 ZPR1O75312 459 aa10.55□□□□□ -0.72
SSR3-206ENST00000476217 BLOC1S3Q6QNY0 202 aa10.55□□□□□ -0.72
SSR3-206ENST00000476217 FAM117AQ9C073 453 aa10.55□□□□□ -0.72
SSR3-206ENST00000476217 GOPCQ9HD26 462 aa10.55□□□□□ -0.72
SSR3-206ENST00000476217 COPS2P61201 443 aa10.53□□□□□ -0.72
SSR3-206ENST00000476217 TUSC1Q2TAM9 212 aa10.53□□□□□ -0.72
SSR3-206ENST00000476217 SCUBE3Q8IX30 993 aa10.53□□□□□ -0.72
SSR3-206ENST00000476217 PUS10Q3MIT2 529 aaKnown RBP10.52□□□□□ -0.73
SSR3-206ENST00000476217 SH3D19Q5HYK7 790 aa10.52□□□□□ -0.73
SSR3-206ENST00000476217 FMNL1O95466 1100 aaPredicted RBP10.51□□□□□ -0.73
SSR3-206ENST00000476217 FDX1P10109 184 aa10.51□□□□□ -0.73
SSR3-206ENST00000476217 PLA2G2EQ9NZK7 142 aa10.51□□□□□ -0.73
SSR3-206ENST00000476217 SLC27A5Q9Y2P5 690 aa10.51□□□□□ -0.73
SSR3-206ENST00000476217 SPTLC1O15269 473 aa10.5□□□□□ -0.73
SSR3-206ENST00000476217 SKIV2LQ15477 1246 aaKnown RBP10.5□□□□□ -0.73
SSR3-206ENST00000476217 MYSM1Q5VVJ2 828 aa10.5□□□□□ -0.73
SSR3-206ENST00000476217 RSBN1LQ6PCB5 846 aaPredicted RBP10.5□□□□□ -0.73
SSR3-206ENST00000476217 RIC3Q7Z5B4 369 aa10.5□□□□□ -0.73
SSR3-206ENST00000476217 PLEKHG3A1L390 1219 aa10.49□□□□□ -0.73
SSR3-206ENST00000476217 MOXD2PA6NHM9 499 aa10.49□□□□□ -0.73
SSR3-206ENST00000476217 SPDYE5A6NIY4 337 aa10.49□□□□□ -0.73
SSR3-206ENST00000476217 PRPF38BQ5VTL8 546 aaKnown RBP10.49□□□□□ -0.73
SSR3-206ENST00000476217 CLK2P49760 499 aaKnown RBP10.48□□□□□ -0.73
SSR3-206ENST00000476217 IL27Q8NEV9 243 aa10.48□□□□□ -0.73
SSR3-206ENST00000476217 ADH1BP00325 375 aa10.47□□□□□ -0.73
SSR3-206ENST00000476217 SPSB2Q99619 263 aa10.47□□□□□ -0.73
SSR3-206ENST00000476217 GGCXP38435 758 aa10.46□□□□□ -0.73
SSR3-206ENST00000476217 BRICD5Q6PL45 260 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms