RNA–Protein interactions for RNA: ENST00000475819.1

LMNB2-202, Transcript of lamin B2, humanhuman

TSL 5

Gene LMNB2, Length 885 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-202ENST00000475819 TET3O43151 1660 aa25.39■■□□□ 1.65
LMNB2-202ENST00000475819 PROSER2Q86WR7 435 aaPredicted RBP25.38■■□□□ 1.65
LMNB2-202ENST00000475819 RPRD2Q5VT52 1461 aaKnown RBP25.38■■□□□ 1.65
LMNB2-202ENST00000475819 NWD1Q149M9 1564 aa25.38■■□□□ 1.65
LMNB2-202ENST00000475819 PPP1R15AO75807 674 aaPredicted RBP25.37■■□□□ 1.65
LMNB2-202ENST00000475819 KCNA6P17658 529 aa25.37■■□□□ 1.65
LMNB2-202ENST00000475819 RBM33Q96EV2 1170 aaKnown RBP25.37■■□□□ 1.65
LMNB2-202ENST00000475819 PCGF6Q9BYE7 350 aa25.36■■□□□ 1.65
LMNB2-202ENST00000475819 SLC52A1Q9NWF4 448 aa25.36■■□□□ 1.65
LMNB2-202ENST00000475819 FAM135BQ49AJ0 1406 aa25.35■■□□□ 1.65
LMNB2-202ENST00000475819 MSH6P52701 1360 aa25.33■■□□□ 1.65
LMNB2-202ENST00000475819 UNC13BO14795 1591 aa25.31■■□□□ 1.64
LMNB2-202ENST00000475819 CHGAP10645 457 aaKnown RBP25.3■■□□□ 1.64
LMNB2-202ENST00000475819 RIMS2Q9UQ26 1411 aa25.29■■□□□ 1.64
LMNB2-202ENST00000475819 TMEM131LA2VDJ0 1609 aa25.28■■□□□ 1.64
LMNB2-202ENST00000475819 PHLPP1O60346 1717 aa25.28■■□□□ 1.64
LMNB2-202ENST00000475819 PLEKHG1Q9ULL1 1385 aa25.28■■□□□ 1.64
LMNB2-202ENST00000475819 ZFYVE9O95405 1425 aa25.27■■□□□ 1.64
LMNB2-202ENST00000475819 HDGFP51858 240 aaKnown RBP25.26■■□□□ 1.63
LMNB2-202ENST00000475819 E9PCH4 1651 aa25.26■■□□□ 1.63
LMNB2-202ENST00000475819 CHD2O14647 1828 aaKnown RBP25.26■■□□□ 1.63
LMNB2-202ENST00000475819 C14orf37Q86TY3 774 aa25.24■■□□□ 1.63
LMNB2-202ENST00000475819 RGS17Q9UGC6 210 aaPredicted RBP25.21■■□□□ 1.63
LMNB2-202ENST00000475819 IQGAP3Q86VI3 1631 aa25.21■■□□□ 1.63
LMNB2-202ENST00000475819 ITGAEP38570 1179 aa25.2■■□□□ 1.62
LMNB2-202ENST00000475819 DIP2AQ14689 1571 aa25.19■■□□□ 1.62
LMNB2-202ENST00000475819 NUTM2DQ5VT03 806 aaPredicted RBP25.19■■□□□ 1.62
LMNB2-202ENST00000475819 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.18■■□□□ 1.62
LMNB2-202ENST00000475819 SLAIN2Q9P270 581 aa25.17■■□□□ 1.62
LMNB2-202ENST00000475819 ROCK1Q13464 1354 aa25.15■■□□□ 1.62
LMNB2-202ENST00000475819 JCADQ9P266 1359 aa25.14■■□□□ 1.61
LMNB2-202ENST00000475819 TRPM2O94759 1503 aa25.13■■□□□ 1.61
LMNB2-202ENST00000475819 COL16A1Q07092 1604 aaPredicted RBP25.12■■□□□ 1.61
LMNB2-202ENST00000475819 NUP155O75694 1391 aa25.12■■□□□ 1.61
LMNB2-202ENST00000475819 SETD1AO15047 1707 aaKnown RBP25.12■■□□□ 1.61
LMNB2-202ENST00000475819 POTEAQ6S8J7 498 aa25.11■■□□□ 1.61
LMNB2-202ENST00000475819 TBX22Q9Y458 520 aa25.11■■□□□ 1.61
LMNB2-202ENST00000475819 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.11■■□□□ 1.61
LMNB2-202ENST00000475819 ADAMTS13Q76LX8 1427 aa25.11■■□□□ 1.61
LMNB2-202ENST00000475819 HFM1A2PYH4 1435 aa25.1■■□□□ 1.61
LMNB2-202ENST00000475819 SPHKAPQ2M3C7 1700 aa25.09■■□□□ 1.61
LMNB2-202ENST00000475819 ATF3P18847 181 aa25.08■■□□□ 1.61
LMNB2-202ENST00000475819 MEX3CQ5U5Q3 659 aaKnown RBP25.08■■□□□ 1.61
LMNB2-202ENST00000475819 NCOA3Q9Y6Q9 1424 aa25.08■■□□□ 1.61
LMNB2-202ENST00000475819 PIK3R4Q99570 1358 aa25.06■■□□□ 1.6
LMNB2-202ENST00000475819 CADPS2Q86UW7 1296 aa25.06■■□□□ 1.6
LMNB2-202ENST00000475819 SETD5Q9C0A6 1442 aa25.05■■□□□ 1.6
LMNB2-202ENST00000475819 AHDC1Q5TGY3 1603 aaPredicted RBP25.04■■□□□ 1.6
LMNB2-202ENST00000475819 NAIPQ13075 1403 aa25.03■■□□□ 1.6
LMNB2-202ENST00000475819 ZNF326Q5BKZ1 582 aaKnown RBP25.02■■□□□ 1.6
LMNB2-202ENST00000475819 SHPRHQ149N8 1683 aa25.01■■□□□ 1.59
LMNB2-202ENST00000475819 C19orf44Q9H6X5 657 aa25.01■■□□□ 1.59
LMNB2-202ENST00000475819 LRP6O75581 1613 aa25.01■■□□□ 1.59
LMNB2-202ENST00000475819 AMOTL2Q9Y2J4 779 aa25■■□□□ 1.59
LMNB2-202ENST00000475819 SPATA31A6Q5VVP1 1343 aa25■■□□□ 1.59
LMNB2-202ENST00000475819 XRN1Q8IZH2 1706 aaKnown RBP24.98■■□□□ 1.59
LMNB2-202ENST00000475819 NRXN3Q9Y4C0 1643 aa24.98■■□□□ 1.59
LMNB2-202ENST00000475819 SETBP1Q9Y6X0 1596 aa24.97■■□□□ 1.59
LMNB2-202ENST00000475819 PTPRUQ92729 1446 aa24.97■■□□□ 1.59
LMNB2-202ENST00000475819 RAB3GAP2Q9H2M9 1393 aa24.96■■□□□ 1.59
LMNB2-202ENST00000475819 DCCP43146 1447 aa24.95■■□□□ 1.58
LMNB2-202ENST00000475819 ACIN1Q9UKV3 1341 aaKnown RBP24.94■■□□□ 1.58
LMNB2-202ENST00000475819 ASXL1Q8IXJ9 1541 aa24.94■■□□□ 1.58
LMNB2-202ENST00000475819 HRCP23327 699 aa24.93■■□□□ 1.58
LMNB2-202ENST00000475819 CLTCL1P53675 1640 aa24.93■■□□□ 1.58
LMNB2-202ENST00000475819 ZNF772Q68DY9 489 aaPredicted RBP24.92■■□□□ 1.58
LMNB2-202ENST00000475819 NUTM2BA6NNL0 878 aaPredicted RBP24.91■■□□□ 1.58
LMNB2-202ENST00000475819 NUTM2EB1AL46 878 aaPredicted RBP24.91■■□□□ 1.58
LMNB2-202ENST00000475819 BRINP3Q76B58 766 aa24.91■■□□□ 1.58
LMNB2-202ENST00000475819 NUTM2AQ8IVF1 878 aaPredicted RBP24.91■■□□□ 1.58
LMNB2-202ENST00000475819 KIF1BO60333 1816 aa24.91■■□□□ 1.58
LMNB2-202ENST00000475819 TRIM52Q96A61 297 aa24.9■■□□□ 1.58
LMNB2-202ENST00000475819 NEXMIFQ5QGS0 1516 aa24.88■■□□□ 1.57
LMNB2-202ENST00000475819 NHSL1Q5SYE7 1610 aa24.88■■□□□ 1.57
LMNB2-202ENST00000475819 NALCNQ8IZF0 1738 aa24.88■■□□□ 1.57
LMNB2-202ENST00000475819 MST1RQ04912 1400 aa24.86■■□□□ 1.57
LMNB2-202ENST00000475819 METP08581 1390 aa24.86■■□□□ 1.57
LMNB2-202ENST00000475819 ADGRL3Q9HAR2 1447 aa24.85■■□□□ 1.57
LMNB2-202ENST00000475819 RXRBP28702 533 aa24.79■■□□□ 1.56
LMNB2-202ENST00000475819 AFF2P51816 1311 aa24.78■■□□□ 1.56
LMNB2-202ENST00000475819 LRRC59Q96AG4 307 aaKnown RBP24.76■■□□□ 1.55
LMNB2-202ENST00000475819 DDX17Q92841 729 aaKnown RBP24.75■■□□□ 1.55
LMNB2-202ENST00000475819 C8orf37Q96NL8 207 aa24.74■■□□□ 1.55
LMNB2-202ENST00000475819 PTCH1Q13635 1447 aa24.74■■□□□ 1.55
LMNB2-202ENST00000475819 PNPLA6Q8IY17 1366 aa24.72■■□□□ 1.55
LMNB2-202ENST00000475819 CDK12Q9NYV4 1490 aaPredicted RBP24.71■■□□□ 1.55
LMNB2-202ENST00000475819 UPF1Q92900 1129 aaKnown RBP eCLIP24.71■■□□□ 1.554e-22■■■■■ 54.3
LMNB2-202ENST00000475819 C1orf167Q5SNV9 1468 aa24.7■■□□□ 1.55
LMNB2-202ENST00000475819 DHX57Q6P158 1386 aaKnown RBP24.7■■□□□ 1.55
LMNB2-202ENST00000475819 PPLO60437 1756 aa24.7■■□□□ 1.54
LMNB2-202ENST00000475819 VGFO15240 615 aaPredicted RBP24.69■■□□□ 1.54
LMNB2-202ENST00000475819 ROBO2Q9HCK4 1378 aa24.67■■□□□ 1.54
LMNB2-202ENST00000475819 ADAMTS2O95450 1211 aa24.67■■□□□ 1.54
LMNB2-202ENST00000475819 SLC4A1APQ9BWU0 796 aaKnown RBP24.67■■□□□ 1.54
LMNB2-202ENST00000475819 CCER1Q8TC90 406 aaPredicted RBP24.66■■□□□ 1.54
LMNB2-202ENST00000475819 RGS12O14924 1447 aa24.65■■□□□ 1.54
LMNB2-202ENST00000475819 LAMC1P11047 1609 aa24.64■■□□□ 1.53
LMNB2-202ENST00000475819 NGLY1Q96IV0 654 aa24.63■■□□□ 1.53
LMNB2-202ENST00000475819 CLSPNQ9HAW4 1339 aa24.62■■□□□ 1.53
LMNB2-202ENST00000475819 RPGRIP1LQ68CZ1 1315 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms