RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 CHMP5Q9NZZ3 219 aa21.69■■□□□ 1.06
LPCAT1-202ENST00000475622 EIF2S2P20042 333 aaKnown RBP21.69■■□□□ 1.06
LPCAT1-202ENST00000475622 C9orf78Q9NZ63 289 aaPredicted RBP21.69■■□□□ 1.06
LPCAT1-202ENST00000475622 SETQ01105 290 aaPredicted RBP21.69■■□□□ 1.06
LPCAT1-202ENST00000475622 FANCIQ9NVI1 1328 aa21.69■■□□□ 1.06
LPCAT1-202ENST00000475622 NEXNQ0ZGT2 675 aa21.69■■□□□ 1.06
LPCAT1-202ENST00000475622 CCDC70Q6NSX1 233 aa21.69■■□□□ 1.06
LPCAT1-202ENST00000475622 NGEFQ8N5V2 710 aa21.68■■□□□ 1.06
LPCAT1-202ENST00000475622 ANO2Q9NQ90 1003 aa21.68■■□□□ 1.06
LPCAT1-202ENST00000475622 EVC2Q86UK5 1308 aa21.68■■□□□ 1.06
LPCAT1-202ENST00000475622 USP47Q96K76 1375 aa21.68■■□□□ 1.06
LPCAT1-202ENST00000475622 LRRFIP1Q32MZ4 808 aaKnown RBP21.67■■□□□ 1.06
LPCAT1-202ENST00000475622 DZIP1LQ8IYY4 767 aaKnown RBP21.67■■□□□ 1.06
LPCAT1-202ENST00000475622 TRIM29Q14134 588 aa21.67■■□□□ 1.06
LPCAT1-202ENST00000475622 BICD2Q8TD16 824 aa21.66■■□□□ 1.06
LPCAT1-202ENST00000475622 ZNF771Q7L3S4 317 aaPredicted RBP21.66■■□□□ 1.06
LPCAT1-202ENST00000475622 CPLX1O14810 134 aa21.66■■□□□ 1.06
LPCAT1-202ENST00000475622 IFIT2P09913 472 aaKnown RBP21.66■■□□□ 1.06
LPCAT1-202ENST00000475622 IPO7O95373 1038 aaKnown RBP21.65■■□□□ 1.06
LPCAT1-202ENST00000475622 PCMTD1Q96MG8 357 aaPredicted RBP21.65■■□□□ 1.06
LPCAT1-202ENST00000475622 API5Q9BZZ5 524 aaKnown RBP21.65■■□□□ 1.06
LPCAT1-202ENST00000475622 PDS5BQ9NTI5 1447 aa21.65■■□□□ 1.06
LPCAT1-202ENST00000475622 WWC1Q8IX03 1113 aa21.64■■□□□ 1.06
LPCAT1-202ENST00000475622 NECTIN2Q92692 538 aa21.64■■□□□ 1.06
LPCAT1-202ENST00000475622 MINK1Q8N4C8 1332 aaPredicted RBP21.64■■□□□ 1.05
LPCAT1-202ENST00000475622 FAM13BQ9NYF5 915 aa21.64■■□□□ 1.05
LPCAT1-202ENST00000475622 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.63■■□□□ 1.05
LPCAT1-202ENST00000475622 VGFO15240 615 aaPredicted RBP21.63■■□□□ 1.05
LPCAT1-202ENST00000475622 HOMER1Q86YM7 354 aa21.63■■□□□ 1.05
LPCAT1-202ENST00000475622 DIAPH1O60610 1272 aaKnown RBP21.63■■□□□ 1.05
LPCAT1-202ENST00000475622 APPP05067 770 aa21.62■■□□□ 1.05
LPCAT1-202ENST00000475622 RIPK4P57078 832 aa21.62■■□□□ 1.05
LPCAT1-202ENST00000475622 MROH2BQ7Z745 1585 aa21.62■■□□□ 1.05
LPCAT1-202ENST00000475622 RAPGEF2Q9Y4G8 1499 aa21.62■■□□□ 1.05
LPCAT1-202ENST00000475622 TTC5Q8N0Z6 440 aa21.62■■□□□ 1.05
LPCAT1-202ENST00000475622 VPS37CA5D8V6 355 aaPredicted RBP21.62■■□□□ 1.05
LPCAT1-202ENST00000475622 UACAQ9BZF9 1416 aa21.62■■□□□ 1.05
LPCAT1-202ENST00000475622 ANKRD20A12PQ8NF67 263 aa21.61■■□□□ 1.05
LPCAT1-202ENST00000475622 RNF20Q5VTR2 975 aa21.6■■□□□ 1.05
LPCAT1-202ENST00000475622 RAD21O60216 631 aa21.59■■□□□ 1.05
LPCAT1-202ENST00000475622 FKBP5Q13451 457 aaPredicted RBP21.59■■□□□ 1.05
LPCAT1-202ENST00000475622 CCDC47Q96A33 483 aaKnown RBP21.59■■□□□ 1.05
LPCAT1-202ENST00000475622 SMC3Q9UQE7 1217 aa21.59■■□□□ 1.05
LPCAT1-202ENST00000475622 PATL2C9JE40 543 aaKnown RBP21.58■■□□□ 1.04
LPCAT1-202ENST00000475622 NUCB2P80303 420 aa21.58■■□□□ 1.04
LPCAT1-202ENST00000475622 LNPKQ9C0E8 428 aa21.58■■□□□ 1.04
LPCAT1-202ENST00000475622 TRDNQ13061 729 aa21.57■■□□□ 1.04
LPCAT1-202ENST00000475622 INTS3Q68E01 1043 aaKnown RBP21.57■■□□□ 1.04
LPCAT1-202ENST00000475622 AMOTL1Q8IY63 956 aa21.57■■□□□ 1.04
LPCAT1-202ENST00000475622 G3BP1Q13283 466 aaKnown RBP eCLIP21.57■■□□□ 1.04
LPCAT1-202ENST00000475622 NOL10Q9BSC4 688 aaKnown RBP21.56■■□□□ 1.04
LPCAT1-202ENST00000475622 FBXW7Q969H0 707 aa21.56■■□□□ 1.04
LPCAT1-202ENST00000475622 FAM43AQ8N2R8 423 aa21.56■■□□□ 1.04
LPCAT1-202ENST00000475622 HOOK1Q9UJC3 728 aaKnown RBP21.56■■□□□ 1.04
LPCAT1-202ENST00000475622 SASS6Q6UVJ0 657 aa21.56■■□□□ 1.04
LPCAT1-202ENST00000475622 JPH4Q96JJ6 628 aa21.55■■□□□ 1.04
LPCAT1-202ENST00000475622 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.55■■□□□ 1.04
LPCAT1-202ENST00000475622 ROCK1Q13464 1354 aa21.55■■□□□ 1.04
LPCAT1-202ENST00000475622 EVA1CP58658 441 aa21.55■■□□□ 1.04
LPCAT1-202ENST00000475622 C22orf23Q9BZE7 217 aa21.55■■□□□ 1.04
LPCAT1-202ENST00000475622 DHX16O60231 1041 aaKnown RBP21.54■■□□□ 1.04
LPCAT1-202ENST00000475622 DDX58O95786 925 aaKnown RBP21.54■■□□□ 1.04
LPCAT1-202ENST00000475622 TEX35Q5T0J7 233 aa21.54■■□□□ 1.04
LPCAT1-202ENST00000475622 RUNDC1Q96C34 613 aa21.54■■□□□ 1.04
LPCAT1-202ENST00000475622 TCEAL9Q9UHQ7 104 aa21.54■■□□□ 1.04
LPCAT1-202ENST00000475622 NFXL1Q6ZNB6 911 aa21.53■■□□□ 1.04
LPCAT1-202ENST00000475622 FOSBP53539 338 aa21.52■■□□□ 1.04
LPCAT1-202ENST00000475622 CCDC73Q6ZRK6 1079 aa21.52■■□□□ 1.04
LPCAT1-202ENST00000475622 IFT57Q9NWB7 429 aa21.51■■□□□ 1.03
LPCAT1-202ENST00000475622 TRIM34Q9BYJ4 488 aa21.5■■□□□ 1.03
LPCAT1-202ENST00000475622 NFKBIBQ15653 356 aa21.5■■□□□ 1.03
LPCAT1-202ENST00000475622 VPS37DQ86XT2 251 aa21.49■■□□□ 1.03
LPCAT1-202ENST00000475622 GNAI1P63096 354 aa21.49■■□□□ 1.03
LPCAT1-202ENST00000475622 PANK1Q8TE04 598 aa21.49■■□□□ 1.03
LPCAT1-202ENST00000475622 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.48■■□□□ 1.03
LPCAT1-202ENST00000475622 HSP90AB4PQ58FF6 505 aa21.48■■□□□ 1.03
LPCAT1-202ENST00000475622 ERC2O15083 957 aa21.48■■□□□ 1.03
LPCAT1-202ENST00000475622 SMARCA2P51531 1590 aa21.48■■□□□ 1.03
LPCAT1-202ENST00000475622 ERICH2A1L162 156 aa21.48■■□□□ 1.03
LPCAT1-202ENST00000475622 MNS1Q8NEH6 495 aa21.48■■□□□ 1.03
LPCAT1-202ENST00000475622 TSPYL4Q9UJ04 414 aa21.47■■□□□ 1.03
LPCAT1-202ENST00000475622 SAFBQ15424 915 aaKnown RBP eCLIP21.46■■□□□ 1.03
LPCAT1-202ENST00000475622 CTDP1Q9Y5B0 961 aaPredicted RBP21.46■■□□□ 1.03
LPCAT1-202ENST00000475622 MSH5O43196 834 aa21.46■■□□□ 1.03
LPCAT1-202ENST00000475622 HMOX1P09601 288 aa21.45■■□□□ 1.02
LPCAT1-202ENST00000475622 CDC45O75419 566 aa21.44■■□□□ 1.02
LPCAT1-202ENST00000475622 ARGLU1Q9NWB6 273 aaPredicted RBP21.44■■□□□ 1.02
LPCAT1-202ENST00000475622 SYTL4Q96C24 671 aaPredicted RBP21.43■■□□□ 1.02
LPCAT1-202ENST00000475622 NAP1L1P55209 391 aaKnown RBP21.43■■□□□ 1.02
LPCAT1-202ENST00000475622 RALYLQ86SE5 291 aaKnown RBP21.43■■□□□ 1.02
LPCAT1-202ENST00000475622 RUFY1Q96T51 708 aa21.43■■□□□ 1.02
LPCAT1-202ENST00000475622 MRE11P49959 708 aa21.43■■□□□ 1.02
LPCAT1-202ENST00000475622 RNF214Q8ND24 703 aa21.43■■□□□ 1.02
LPCAT1-202ENST00000475622 KIF7Q2M1P5 1343 aa21.43■■□□□ 1.02
LPCAT1-202ENST00000475622 NASPP49321 788 aaPredicted RBP21.42■■□□□ 1.02
LPCAT1-202ENST00000475622 NEUROD6Q96NK8 337 aa21.42■■□□□ 1.02
LPCAT1-202ENST00000475622 BCL11BQ9C0K0 894 aaPredicted RBP21.42■■□□□ 1.02
LPCAT1-202ENST00000475622 CCDC7Q96M83 1385 aa21.42■■□□□ 1.02
LPCAT1-202ENST00000475622 AAMPQ13685 434 aa21.41■■□□□ 1.02
LPCAT1-202ENST00000475622 R3HCC1Q9Y3T6 440 aaKnown RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms