RNA–Protein interactions for RNA: ENST00000475464.1

PTP4A2-204, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-204ENST00000475464 C14orf37Q86TY3 774 aa15.78■□□□□ 0.12
PTP4A2-204ENST00000475464 TET3O43151 1660 aa15.78■□□□□ 0.12
PTP4A2-204ENST00000475464 ANKRD50Q9ULJ7 1429 aa15.77■□□□□ 0.11
PTP4A2-204ENST00000475464 XIRP1Q702N8 1843 aaKnown RBP15.76■□□□□ 0.11
PTP4A2-204ENST00000475464 ADGRB3O60242 1522 aa15.76■□□□□ 0.11
PTP4A2-204ENST00000475464 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.75■□□□□ 0.11
PTP4A2-204ENST00000475464 NKTRP30414 1462 aaKnown RBP15.75■□□□□ 0.11
PTP4A2-204ENST00000475464 PLEKHG1Q9ULL1 1385 aa15.75■□□□□ 0.11
PTP4A2-204ENST00000475464 KDM5AP29375 1690 aaKnown RBP15.74■□□□□ 0.11
PTP4A2-204ENST00000475464 NUTM2DQ5VT03 806 aaPredicted RBP15.74■□□□□ 0.11
PTP4A2-204ENST00000475464 TBX22Q9Y458 520 aa15.74■□□□□ 0.11
PTP4A2-204ENST00000475464 RIMS2Q9UQ26 1411 aa15.74■□□□□ 0.11
PTP4A2-204ENST00000475464 JCADQ9P266 1359 aa15.73■□□□□ 0.11
PTP4A2-204ENST00000475464 ROBO1Q9Y6N7 1651 aa15.73■□□□□ 0.11
PTP4A2-204ENST00000475464 ADGRL2O95490 1459 aa15.72■□□□□ 0.11
PTP4A2-204ENST00000475464 RPRD2Q5VT52 1461 aaKnown RBP15.72■□□□□ 0.11
PTP4A2-204ENST00000475464 ZFYVE9O95405 1425 aa15.71■□□□□ 0.11
PTP4A2-204ENST00000475464 ATF3P18847 181 aa15.71■□□□□ 0.11
PTP4A2-204ENST00000475464 MEX3CQ5U5Q3 659 aaKnown RBP15.71■□□□□ 0.11
PTP4A2-204ENST00000475464 CADPS2Q86UW7 1296 aa15.69■□□□□ 0.1
PTP4A2-204ENST00000475464 C19orf44Q9H6X5 657 aa15.69■□□□□ 0.1
PTP4A2-204ENST00000475464 NWD1Q149M9 1564 aa15.69■□□□□ 0.1
PTP4A2-204ENST00000475464 NCOA3Q9Y6Q9 1424 aa15.67■□□□□ 0.1
PTP4A2-204ENST00000475464 AMOTL2Q9Y2J4 779 aa15.66■□□□□ 0.1
PTP4A2-204ENST00000475464 ITGAEP38570 1179 aa15.65■□□□□ 0.1
PTP4A2-204ENST00000475464 ZNF772Q68DY9 489 aaPredicted RBP15.65■□□□□ 0.1
PTP4A2-204ENST00000475464 SPATA31A6Q5VVP1 1343 aa15.65■□□□□ 0.1
PTP4A2-204ENST00000475464 NUP155O75694 1391 aa15.63■□□□□ 0.09
PTP4A2-204ENST00000475464 PIK3R4Q99570 1358 aa15.63■□□□□ 0.09
PTP4A2-204ENST00000475464 PHLPP1O60346 1717 aa15.63■□□□□ 0.09
PTP4A2-204ENST00000475464 ADAMTS13Q76LX8 1427 aa15.62■□□□□ 0.09
PTP4A2-204ENST00000475464 TMEM131LA2VDJ0 1609 aa15.62■□□□□ 0.09
PTP4A2-204ENST00000475464 NUTM2BA6NNL0 878 aaPredicted RBP15.62■□□□□ 0.09
PTP4A2-204ENST00000475464 NUTM2EB1AL46 878 aaPredicted RBP15.62■□□□□ 0.09
PTP4A2-204ENST00000475464 NUTM2AQ8IVF1 878 aaPredicted RBP15.62■□□□□ 0.09
PTP4A2-204ENST00000475464 TRIM52Q96A61 297 aa15.62■□□□□ 0.09
PTP4A2-204ENST00000475464 ZNF326Q5BKZ1 582 aaKnown RBP15.61■□□□□ 0.09
PTP4A2-204ENST00000475464 CHD2O14647 1828 aaKnown RBP15.61■□□□□ 0.09
PTP4A2-204ENST00000475464 ROCK1Q13464 1354 aa15.61■□□□□ 0.09
PTP4A2-204ENST00000475464 BRINP3Q76B58 766 aa15.6■□□□□ 0.09
PTP4A2-204ENST00000475464 GCC2Q8IWJ2 1684 aa15.6■□□□□ 0.09
PTP4A2-204ENST00000475464 RXRBP28702 533 aa15.58■□□□□ 0.08
PTP4A2-204ENST00000475464 MYO5BQ9ULV0 1848 aa15.57■□□□□ 0.08
PTP4A2-204ENST00000475464 LRP6O75581 1613 aa15.57■□□□□ 0.08
PTP4A2-204ENST00000475464 COL16A1Q07092 1604 aaPredicted RBP15.57■□□□□ 0.08
PTP4A2-204ENST00000475464 UPF1Q92900 1129 aaKnown RBP eCLIP15.56■□□□□ 0.08
PTP4A2-204ENST00000475464 PTPRUQ92729 1446 aa15.56■□□□□ 0.08
PTP4A2-204ENST00000475464 UNC13BO14795 1591 aa15.56■□□□□ 0.08
PTP4A2-204ENST00000475464 DIP2AQ14689 1571 aa15.56■□□□□ 0.08
PTP4A2-204ENST00000475464 TRPM2O94759 1503 aa15.55■□□□□ 0.08
PTP4A2-204ENST00000475464 PPARGC1BQ86YN6 1023 aaKnown RBP15.55■□□□□ 0.08
PTP4A2-204ENST00000475464 LRRC59Q96AG4 307 aaKnown RBP15.54■□□□□ 0.08
PTP4A2-204ENST00000475464 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.54■□□□□ 0.08
PTP4A2-204ENST00000475464 E9PCH4 1651 aa15.54■□□□□ 0.08
PTP4A2-204ENST00000475464 AHDC1Q5TGY3 1603 aaPredicted RBP15.53■□□□□ 0.08
PTP4A2-204ENST00000475464 SETD1AO15047 1707 aaKnown RBP15.52■□□□□ 0.08
PTP4A2-204ENST00000475464 AFF2P51816 1311 aa15.52■□□□□ 0.08
PTP4A2-204ENST00000475464 IQGAP3Q86VI3 1631 aa15.51■□□□□ 0.07
PTP4A2-204ENST00000475464 DDX17Q92841 729 aaKnown RBP15.51■□□□□ 0.07
PTP4A2-204ENST00000475464 DCCP43146 1447 aa15.51■□□□□ 0.07
PTP4A2-204ENST00000475464 METP08581 1390 aa15.5■□□□□ 0.07
PTP4A2-204ENST00000475464 C8orf37Q96NL8 207 aa15.5■□□□□ 0.07
PTP4A2-204ENST00000475464 QTRT2Q9H974 415 aaKnown RBP15.48■□□□□ 0.07
PTP4A2-204ENST00000475464 MST1RQ04912 1400 aa15.48■□□□□ 0.07
PTP4A2-204ENST00000475464 SETD5Q9C0A6 1442 aa15.48■□□□□ 0.07
PTP4A2-204ENST00000475464 ASXL1Q8IXJ9 1541 aa15.48■□□□□ 0.07
PTP4A2-204ENST00000475464 SHPRHQ149N8 1683 aa15.47■□□□□ 0.07
PTP4A2-204ENST00000475464 ADAMTS2O95450 1211 aa15.46■□□□□ 0.07
PTP4A2-204ENST00000475464 NGLY1Q96IV0 654 aa15.46■□□□□ 0.07
PTP4A2-204ENST00000475464 SETBP1Q9Y6X0 1596 aa15.45■□□□□ 0.06
PTP4A2-204ENST00000475464 RBM6P78332 1123 aaKnown RBP15.45■□□□□ 0.06
PTP4A2-204ENST00000475464 VGFO15240 615 aaPredicted RBP15.44■□□□□ 0.06
PTP4A2-204ENST00000475464 ADGRL3Q9HAR2 1447 aa15.43■□□□□ 0.06
PTP4A2-204ENST00000475464 PNPLA6Q8IY17 1366 aa15.43■□□□□ 0.06
PTP4A2-204ENST00000475464 CDK12Q9NYV4 1490 aaPredicted RBP15.42■□□□□ 0.06
PTP4A2-204ENST00000475464 ORAI2Q96SN7 254 aa15.42■□□□□ 0.06
PTP4A2-204ENST00000475464 NRXN3Q9Y4C0 1643 aa15.41■□□□□ 0.06
PTP4A2-204ENST00000475464 XRN1Q8IZH2 1706 aaKnown RBP15.4■□□□□ 0.06
PTP4A2-204ENST00000475464 C1orf167Q5SNV9 1468 aa15.4■□□□□ 0.06
PTP4A2-204ENST00000475464 USP21Q9UK80 565 aa15.39■□□□□ 0.05
PTP4A2-204ENST00000475464 SPHKAPQ2M3C7 1700 aa15.38■□□□□ 0.05
PTP4A2-204ENST00000475464 SRCAPQ6ZRS2 3230 aa15.38■□□□□ 0.05
PTP4A2-204ENST00000475464 ROBO2Q9HCK4 1378 aa15.37■□□□□ 0.05
PTP4A2-204ENST00000475464 RGS12O14924 1447 aa15.37■□□□□ 0.05
PTP4A2-204ENST00000475464 SLC4A1APQ9BWU0 796 aaKnown RBP15.37■□□□□ 0.05
PTP4A2-204ENST00000475464 SOS2Q07890 1332 aaPredicted RBP15.37■□□□□ 0.05
PTP4A2-204ENST00000475464 RPGRIP1LQ68CZ1 1315 aa15.37■□□□□ 0.05
PTP4A2-204ENST00000475464 NEXMIFQ5QGS0 1516 aa15.37■□□□□ 0.05
PTP4A2-204ENST00000475464 ESCO1Q5FWF5 840 aa15.36■□□□□ 0.05
PTP4A2-204ENST00000475464 TRPC5Q9UL62 973 aaPredicted RBP15.36■□□□□ 0.05
PTP4A2-204ENST00000475464 NHSL1Q5SYE7 1610 aa15.35■□□□□ 0.05
PTP4A2-204ENST00000475464 CLTCL1P53675 1640 aa15.35■□□□□ 0.05
PTP4A2-204ENST00000475464 NAIPQ13075 1403 aa15.34■□□□□ 0.05
PTP4A2-204ENST00000475464 PTCH1Q13635 1447 aa15.34■□□□□ 0.05
PTP4A2-204ENST00000475464 FNBP4Q8N3X1 1017 aaPredicted RBP15.33■□□□□ 0.04
PTP4A2-204ENST00000475464 ATAD2Q6PL18 1390 aa15.33■□□□□ 0.04
PTP4A2-204ENST00000475464 STK26Q9P289 416 aa15.32■□□□□ 0.04
PTP4A2-204ENST00000475464 NPHP3Q7Z494 1330 aa15.32■□□□□ 0.04
PTP4A2-204ENST00000475464 HFM1A2PYH4 1435 aa15.32■□□□□ 0.04
PTP4A2-204ENST00000475464 NALCNQ8IZF0 1738 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms