RNA–Protein interactions for RNA: ENST00000474945.1

SPCS1-204, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 2

Gene SPCS1, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-204ENST00000474945 RIMS2Q9UQ26 1411 aa20.53■□□□□ 0.88
SPCS1-204ENST00000474945 PPP1R15AO75807 674 aaPredicted RBP20.53■□□□□ 0.88
SPCS1-204ENST00000474945 LRRC7Q96NW7 1537 aa20.52■□□□□ 0.87
SPCS1-204ENST00000474945 BCANQ96GW7 911 aa20.51■□□□□ 0.87
SPCS1-204ENST00000474945 TRIM52Q96A61 297 aa20.5■□□□□ 0.87
SPCS1-204ENST00000474945 SCAF1Q9H7N4 1312 aaKnown RBP20.49■□□□□ 0.87
SPCS1-204ENST00000474945 TRPM2O94759 1503 aa20.48■□□□□ 0.87
SPCS1-204ENST00000474945 PLEKHG1Q9ULL1 1385 aa20.48■□□□□ 0.87
SPCS1-204ENST00000474945 SLC26A8Q96RN1 970 aa20.47■□□□□ 0.87
SPCS1-204ENST00000474945 CLTCL1P53675 1640 aa20.46■□□□□ 0.87
SPCS1-204ENST00000474945 HDGFP51858 240 aaKnown RBP20.45■□□□□ 0.86
SPCS1-204ENST00000474945 PIP4K2BP78356 416 aa20.45■□□□□ 0.86
SPCS1-204ENST00000474945 NWD1Q149M9 1564 aa20.44■□□□□ 0.86
SPCS1-204ENST00000474945 TOM1O60784 492 aa20.44■□□□□ 0.86
SPCS1-204ENST00000474945 NUTM2DQ5VT03 806 aaPredicted RBP20.44■□□□□ 0.86
SPCS1-204ENST00000474945 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.44■□□□□ 0.86
SPCS1-204ENST00000474945 NKTRP30414 1462 aaKnown RBP20.42■□□□□ 0.86
SPCS1-204ENST00000474945 SLC4A1APQ9BWU0 796 aaKnown RBP20.41■□□□□ 0.86
SPCS1-204ENST00000474945 DIP2AQ14689 1571 aa20.41■□□□□ 0.86
SPCS1-204ENST00000474945 ALKQ9UM73 1620 aa20.41■□□□□ 0.86
SPCS1-204ENST00000474945 KCNA6P17658 529 aa20.39■□□□□ 0.85
SPCS1-204ENST00000474945 ZNF326Q5BKZ1 582 aaKnown RBP20.39■□□□□ 0.85
SPCS1-204ENST00000474945 TMEM94Q12767 1356 aa20.38■□□□□ 0.85
SPCS1-204ENST00000474945 XIRP1Q702N8 1843 aaKnown RBP20.38■□□□□ 0.85
SPCS1-204ENST00000474945 ADAMTS13Q76LX8 1427 aa20.36■□□□□ 0.85
SPCS1-204ENST00000474945 KIF1BO60333 1816 aa20.36■□□□□ 0.85
SPCS1-204ENST00000474945 PIAS4Q8N2W9 510 aaPredicted RBP20.35■□□□□ 0.85
SPCS1-204ENST00000474945 NEXMIFQ5QGS0 1516 aa20.34■□□□□ 0.85
SPCS1-204ENST00000474945 SETBP1Q9Y6X0 1596 aa20.34■□□□□ 0.85
SPCS1-204ENST00000474945 PROSER2Q86WR7 435 aaPredicted RBP20.33■□□□□ 0.85
SPCS1-204ENST00000474945 CHD2O14647 1828 aaKnown RBP20.32■□□□□ 0.84
SPCS1-204ENST00000474945 NRXN3Q9Y4C0 1643 aa20.32■□□□□ 0.84
SPCS1-204ENST00000474945 HSPA1LP34931 641 aa20.32■□□□□ 0.84
SPCS1-204ENST00000474945 RBM33Q96EV2 1170 aaKnown RBP20.32■□□□□ 0.84
SPCS1-204ENST00000474945 TBX22Q9Y458 520 aa20.32■□□□□ 0.84
SPCS1-204ENST00000474945 SETD5Q9C0A6 1442 aa20.32■□□□□ 0.84
SPCS1-204ENST00000474945 PIK3R4Q99570 1358 aa20.29■□□□□ 0.84
SPCS1-204ENST00000474945 DISP3Q9P2K9 1392 aa20.29■□□□□ 0.84
SPCS1-204ENST00000474945 CCDC144AA2RUR9 1427 aa20.28■□□□□ 0.84
SPCS1-204ENST00000474945 MSH6P52701 1360 aa20.28■□□□□ 0.84
SPCS1-204ENST00000474945 RAB3GAP2Q9H2M9 1393 aa20.27■□□□□ 0.84
SPCS1-204ENST00000474945 MPHOSPH9Q99550 1183 aa20.27■□□□□ 0.84
SPCS1-204ENST00000474945 C14orf37Q86TY3 774 aa20.25■□□□□ 0.83
SPCS1-204ENST00000474945 XRN1Q8IZH2 1706 aaKnown RBP20.24■□□□□ 0.83
SPCS1-204ENST00000474945 PTPRUQ92729 1446 aa20.24■□□□□ 0.83
SPCS1-204ENST00000474945 ACIN1Q9UKV3 1341 aaKnown RBP20.24■□□□□ 0.83
SPCS1-204ENST00000474945 PPLO60437 1756 aa20.22■□□□□ 0.83
SPCS1-204ENST00000474945 AMOTL2Q9Y2J4 779 aa20.21■□□□□ 0.83
SPCS1-204ENST00000474945 ROBO1Q9Y6N7 1651 aa20.21■□□□□ 0.83
SPCS1-204ENST00000474945 METP08581 1390 aa20.21■□□□□ 0.83
SPCS1-204ENST00000474945 NCOA3Q9Y6Q9 1424 aa20.19■□□□□ 0.82
SPCS1-204ENST00000474945 RPGRIP1LQ68CZ1 1315 aa20.19■□□□□ 0.82
SPCS1-204ENST00000474945 FAM135BQ49AJ0 1406 aa20.19■□□□□ 0.82
SPCS1-204ENST00000474945 MED1Q15648 1581 aaPredicted RBP20.18■□□□□ 0.82
SPCS1-204ENST00000474945 VGFO15240 615 aaPredicted RBP20.18■□□□□ 0.82
SPCS1-204ENST00000474945 SPATA31E1Q6ZUB1 1445 aa20.18■□□□□ 0.82
SPCS1-204ENST00000474945 SETD1AO15047 1707 aaKnown RBP20.16■□□□□ 0.82
SPCS1-204ENST00000474945 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.15■□□□□ 0.82
SPCS1-204ENST00000474945 RGL3Q3MIN7 710 aa20.14■□□□□ 0.81
SPCS1-204ENST00000474945 IFT172Q9UG01 1749 aa20.13■□□□□ 0.81
SPCS1-204ENST00000474945 PTCH1Q13635 1447 aa20.12■□□□□ 0.81
SPCS1-204ENST00000474945 ATF3P18847 181 aa20.12■□□□□ 0.81
SPCS1-204ENST00000474945 SLAIN2Q9P270 581 aa20.12■□□□□ 0.81
SPCS1-204ENST00000474945 DCCP43146 1447 aa20.11■□□□□ 0.81
SPCS1-204ENST00000474945 ANKRD30BQ9BXX2 1392 aa20.11■□□□□ 0.81
SPCS1-204ENST00000474945 CADPS2Q86UW7 1296 aa20.11■□□□□ 0.81
SPCS1-204ENST00000474945 C19orf44Q9H6X5 657 aa20.11■□□□□ 0.81
SPCS1-204ENST00000474945 NALCNQ8IZF0 1738 aa20.1■□□□□ 0.81
SPCS1-204ENST00000474945 ADGRL3Q9HAR2 1447 aa20.1■□□□□ 0.81
SPCS1-204ENST00000474945 ADGRF5Q8IZF2 1346 aa20.09■□□□□ 0.81
SPCS1-204ENST00000474945 PHLPP1O60346 1717 aa20.09■□□□□ 0.81
SPCS1-204ENST00000474945 PIK3C2GO75747 1445 aa20.07■□□□□ 0.8
SPCS1-204ENST00000474945 ROBO2Q9HCK4 1378 aa20.07■□□□□ 0.8
SPCS1-204ENST00000474945 PRAG1Q86YV5 1406 aa20.06■□□□□ 0.8
SPCS1-204ENST00000474945 MSH5O43196 834 aa20.05■□□□□ 0.8
SPCS1-204ENST00000474945 MYOM2P54296 1465 aa20.05■□□□□ 0.8
SPCS1-204ENST00000474945 ASXL1Q8IXJ9 1541 aa20.04■□□□□ 0.8
SPCS1-204ENST00000474945 ILDR2Q71H61 639 aa20.04■□□□□ 0.8
SPCS1-204ENST00000474945 MST1RQ04912 1400 aa20.03■□□□□ 0.8
SPCS1-204ENST00000474945 COL16A1Q07092 1604 aaPredicted RBP20.03■□□□□ 0.8
SPCS1-204ENST00000474945 AHDC1Q5TGY3 1603 aaPredicted RBP20.02■□□□□ 0.8
SPCS1-204ENST00000474945 HRCP23327 699 aa20.02■□□□□ 0.8
SPCS1-204ENST00000474945 LAMC1P11047 1609 aa20.01■□□□□ 0.79
SPCS1-204ENST00000474945 NRXN1Q9ULB1 1477 aa19.99■□□□□ 0.79
SPCS1-204ENST00000474945 BRINP3Q76B58 766 aa19.99■□□□□ 0.79
SPCS1-204ENST00000474945 KNDC1Q76NI1 1749 aa19.99■□□□□ 0.79
SPCS1-204ENST00000474945 LRPPRCP42704 1394 aaKnown RBP19.98■□□□□ 0.79
SPCS1-204ENST00000474945 JCADQ9P266 1359 aa19.98■□□□□ 0.79
SPCS1-204ENST00000474945 STK26Q9P289 416 aa19.98■□□□□ 0.79
SPCS1-204ENST00000474945 TECPR2O15040 1411 aa19.98■□□□□ 0.79
SPCS1-204ENST00000474945 CDC42BPGQ6DT37 1551 aa19.96■□□□□ 0.79
SPCS1-204ENST00000474945 YTHDC2Q9H6S0 1430 aaKnown RBP19.95■□□□□ 0.78
SPCS1-204ENST00000474945 TMEM132EQ6IEE7 984 aa19.95■□□□□ 0.78
SPCS1-204ENST00000474945 NHSL1Q5SYE7 1610 aa19.94■□□□□ 0.78
SPCS1-204ENST00000474945 C1orf167Q5SNV9 1468 aa19.93■□□□□ 0.78
SPCS1-204ENST00000474945 ABCC11Q96J66 1382 aa19.92■□□□□ 0.78
SPCS1-204ENST00000474945 SHPRHQ149N8 1683 aa19.91■□□□□ 0.78
SPCS1-204ENST00000474945 CFAP70Q5T0N1 1121 aa19.91■□□□□ 0.78
SPCS1-204ENST00000474945 C14orf93Q9H972 538 aaKnown RBP19.91■□□□□ 0.78
SPCS1-204ENST00000474945 PLEKHH1Q9ULM0 1364 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms