RNA–Protein interactions for RNA: ENST00000474839.5

SKIV2L-208, Transcript of Ski2 like RNA helicase, humanhuman

TSL 2

Gene SKIV2L, Length 3,378 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-208ENST00000474839 UPF2Q9HAU5 1272 aaKnown RBP15.52■□□□□ 0.07
SKIV2L-208ENST00000474839 AMER1Q5JTC6 1135 aaPredicted RBP15.52■□□□□ 0.07
SKIV2L-208ENST00000474839 BECN1Q14457 450 aa15.51■□□□□ 0.07
SKIV2L-208ENST00000474839 CENPJQ9HC77 1338 aaPredicted RBP15.51■□□□□ 0.07
SKIV2L-208ENST00000474839 CLASP1Q7Z460 1538 aa15.51■□□□□ 0.07
SKIV2L-208ENST00000474839 POLR1AO95602 1720 aaPredicted RBP15.51■□□□□ 0.07
SKIV2L-208ENST00000474839 EFCAB2Q5VUJ9 269 aa15.5■□□□□ 0.07
SKIV2L-208ENST00000474839 CDCA8Q53HL2 280 aa15.5■□□□□ 0.07
SKIV2L-208ENST00000474839 ADGRL2O95490 1459 aa15.5■□□□□ 0.07
SKIV2L-208ENST00000474839 CFAP70Q5T0N1 1121 aa15.49■□□□□ 0.07
SKIV2L-208ENST00000474839 ARHGAP5Q13017 1502 aa15.49■□□□□ 0.07
SKIV2L-208ENST00000474839 RAPGEF3O95398 923 aa15.49■□□□□ 0.07
SKIV2L-208ENST00000474839 PLEKHH2Q8IVE3 1493 aa15.48■□□□□ 0.07
SKIV2L-208ENST00000474839 E9PSI1 815 aa15.48■□□□□ 0.07
SKIV2L-208ENST00000474839 A2MP01023 1474 aa15.48■□□□□ 0.07
SKIV2L-208ENST00000474839 ABCC2Q92887 1545 aa15.47■□□□□ 0.07
SKIV2L-208ENST00000474839 FAM135AQ9P2D6 1515 aa15.47■□□□□ 0.07
SKIV2L-208ENST00000474839 FAM69CQ0P6D2 419 aa15.47■□□□□ 0.07
SKIV2L-208ENST00000474839 MORC1Q86VD1 984 aa15.47■□□□□ 0.07
SKIV2L-208ENST00000474839 BLMP54132 1417 aaPredicted RBP15.46■□□□□ 0.07
SKIV2L-208ENST00000474839 NUTM2DQ5VT03 806 aaPredicted RBP15.46■□□□□ 0.07
SKIV2L-208ENST00000474839 ARHGEF12Q9NZN5 1544 aa15.46■□□□□ 0.07
SKIV2L-208ENST00000474839 MFAP1P55081 439 aaKnown RBP15.46■□□□□ 0.07
SKIV2L-208ENST00000474839 SAFB2Q14151 953 aaKnown RBP eCLIP15.46■□□□□ 0.07
SKIV2L-208ENST00000474839 PLPPR3Q6T4P5 718 aa15.46■□□□□ 0.07
SKIV2L-208ENST00000474839 TRAK1Q9UPV9 953 aa15.45■□□□□ 0.06
SKIV2L-208ENST00000474839 ASXL2Q76L83 1435 aa15.45■□□□□ 0.06
SKIV2L-208ENST00000474839 COL17A1Q9UMD9 1497 aaPredicted RBP15.45■□□□□ 0.06
SKIV2L-208ENST00000474839 MAGI2Q86UL8 1455 aa15.44■□□□□ 0.06
SKIV2L-208ENST00000474839 RSPH4AQ5TD94 716 aa15.44■□□□□ 0.06
SKIV2L-208ENST00000474839 FTSJ3Q8IY81 847 aaKnown RBP15.43■□□□□ 0.06
SKIV2L-208ENST00000474839 WWC1Q8IX03 1113 aa15.42■□□□□ 0.06
SKIV2L-208ENST00000474839 PLA2R1Q13018 1463 aa15.42■□□□□ 0.06
SKIV2L-208ENST00000474839 SHROOM2Q13796 1616 aa15.42■□□□□ 0.06
SKIV2L-208ENST00000474839 PDZRN3Q9UPQ7 1066 aa15.42■□□□□ 0.06
SKIV2L-208ENST00000474839 ZMYM4Q5VZL5 1548 aa15.42■□□□□ 0.06
SKIV2L-208ENST00000474839 ITSN2Q9NZM3 1697 aa15.42■□□□□ 0.06
SKIV2L-208ENST00000474839 PCDHB15Q9Y5E8 787 aa15.42■□□□□ 0.06
SKIV2L-208ENST00000474839 KIF3BO15066 747 aa15.41■□□□□ 0.06
SKIV2L-208ENST00000474839 RLBP1P12271 317 aa15.41■□□□□ 0.06
SKIV2L-208ENST00000474839 CGNL1Q0VF96 1302 aa15.41■□□□□ 0.06
SKIV2L-208ENST00000474839 AEBP2Q6ZN18 517 aaPredicted RBP15.41■□□□□ 0.06
SKIV2L-208ENST00000474839 ADGBQ8N7X0 1667 aa15.41■□□□□ 0.06
SKIV2L-208ENST00000474839 CCDC141Q6ZP82 1450 aa15.41■□□□□ 0.06
SKIV2L-208ENST00000474839 TCP11L2Q8N4U5 519 aa15.41■□□□□ 0.06
SKIV2L-208ENST00000474839 SLC12A5Q9H2X9 1139 aa15.41■□□□□ 0.06
SKIV2L-208ENST00000474839 TTC37Q6PGP7 1564 aa15.41■□□□□ 0.06
SKIV2L-208ENST00000474839 SPAG9O60271 1321 aaKnown RBP15.41■□□□□ 0.06
SKIV2L-208ENST00000474839 TRHP20396 242 aaPredicted RBP15.41■□□□□ 0.06
SKIV2L-208ENST00000474839 GGT6Q6P531 493 aa15.41■□□□□ 0.06
SKIV2L-208ENST00000474839 U2SURPO15042 1029 aaKnown RBP15.4■□□□□ 0.06
SKIV2L-208ENST00000474839 U2AF1L5P0DN76 240 aaPredicted RBP15.4■□□□□ 0.06
SKIV2L-208ENST00000474839 U2AF1Q01081 240 aaKnown RBP eCLIP15.4■□□□□ 0.061e-11■□□□□ 10.3
SKIV2L-208ENST00000474839 CARD14Q9BXL6 1004 aa15.4■□□□□ 0.06
SKIV2L-208ENST00000474839 FOXD4L1Q9NU39 408 aa15.4■□□□□ 0.06
SKIV2L-208ENST00000474839 ABCC10Q5T3U5 1492 aa15.4■□□□□ 0.06
SKIV2L-208ENST00000474839 ZNF521Q96K83 1311 aa15.4■□□□□ 0.06
SKIV2L-208ENST00000474839 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.39■□□□□ 0.05
SKIV2L-208ENST00000474839 KDM5DQ9BY66 1539 aa15.39■□□□□ 0.05
SKIV2L-208ENST00000474839 TMEM132EQ6IEE7 984 aa15.39■□□□□ 0.05
SKIV2L-208ENST00000474839 NAP1L5Q96NT1 182 aaPredicted RBP15.39■□□□□ 0.05
SKIV2L-208ENST00000474839 ADCY10Q96PN6 1610 aa15.38■□□□□ 0.05
SKIV2L-208ENST00000474839 MLECQ14165 292 aa15.38■□□□□ 0.05
SKIV2L-208ENST00000474839 SYCP2Q9BX26 1530 aa15.38■□□□□ 0.05
SKIV2L-208ENST00000474839 NKTRP30414 1462 aaKnown RBP15.38■□□□□ 0.05
SKIV2L-208ENST00000474839 SCAPERQ9BY12 1400 aa15.38■□□□□ 0.05
SKIV2L-208ENST00000474839 TRAPPC8Q9Y2L5 1435 aa15.38■□□□□ 0.05
SKIV2L-208ENST00000474839 TSR2Q969E8 191 aaKnown RBP15.38■□□□□ 0.05
SKIV2L-208ENST00000474839 ZCCHC11Q5TAX3 1644 aaKnown RBP15.37■□□□□ 0.05
SKIV2L-208ENST00000474839 MAPK8IP3Q9UPT6 1336 aa15.37■□□□□ 0.05
SKIV2L-208ENST00000474839 TBC1D2Q9BYX2 928 aa15.37■□□□□ 0.05
SKIV2L-208ENST00000474839 USP19O94966 1318 aa15.37■□□□□ 0.05
SKIV2L-208ENST00000474839 GPRASP1Q5JY77 1395 aa15.36■□□□□ 0.05
SKIV2L-208ENST00000474839 MTHFSP49914 203 aa15.36■□□□□ 0.05
SKIV2L-208ENST00000474839 ITPRIPQ8IWB1 547 aa15.36■□□□□ 0.05
SKIV2L-208ENST00000474839 RARSP54136 660 aaKnown RBP15.36■□□□□ 0.05
SKIV2L-208ENST00000474839 PDE3AQ14432 1141 aa15.36■□□□□ 0.05
SKIV2L-208ENST00000474839 PMFBP1Q8TBY8 1022 aa15.36■□□□□ 0.05
SKIV2L-208ENST00000474839 RWDD1Q9H446 243 aaPredicted RBP15.35■□□□□ 0.05
SKIV2L-208ENST00000474839 PANK2Q9BZ23 570 aa15.35■□□□□ 0.05
SKIV2L-208ENST00000474839 HSP90AA1P07900 732 aaKnown RBP15.35■□□□□ 0.05
SKIV2L-208ENST00000474839 ADGRF5Q8IZF2 1346 aa15.34■□□□□ 0.05
SKIV2L-208ENST00000474839 A0A0U1RQG5 324 aaPredicted RBP15.34■□□□□ 0.05
SKIV2L-208ENST00000474839 WDR7Q9Y4E6 1490 aa15.34■□□□□ 0.05
SKIV2L-208ENST00000474839 GOLGA6L3A6NEY3 463 aa15.34■□□□□ 0.05
SKIV2L-208ENST00000474839 SMC4Q9NTJ3 1288 aa15.34■□□□□ 0.05
SKIV2L-208ENST00000474839 RRAGDQ9NQL2 400 aaPredicted RBP15.33■□□□□ 0.05
SKIV2L-208ENST00000474839 CDC42BPAQ5VT25 1732 aa15.32■□□□□ 0.04
SKIV2L-208ENST00000474839 TRMT2AQ8IZ69 625 aaKnown RBP15.32■□□□□ 0.04
SKIV2L-208ENST00000474839 SHANK2Q9UPX8 1470 aa15.32■□□□□ 0.04
SKIV2L-208ENST00000474839 FAM43AQ8N2R8 423 aa15.32■□□□□ 0.04
SKIV2L-208ENST00000474839 CD109Q6YHK3 1445 aa15.32■□□□□ 0.04
SKIV2L-208ENST00000474839 TRPM1Q7Z4N2 1603 aa15.31■□□□□ 0.04
SKIV2L-208ENST00000474839 EIF3AQ14152 1382 aaKnown RBP15.31■□□□□ 0.04
SKIV2L-208ENST00000474839 L1TD1Q5T7N2 865 aaKnown RBP15.31■□□□□ 0.04
SKIV2L-208ENST00000474839 RUNDC1Q96C34 613 aa15.31■□□□□ 0.04
SKIV2L-208ENST00000474839 PLCH2O75038 1416 aa15.31■□□□□ 0.04
SKIV2L-208ENST00000474839 C22orf23Q9BZE7 217 aa15.31■□□□□ 0.04
SKIV2L-208ENST00000474839 FANCAO15360 1455 aa15.31■□□□□ 0.04
SKIV2L-208ENST00000474839 CFAP53Q96M91 514 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms