RNA–Protein interactions for RNA: ENST00000474270.1

ABCD4-207, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-207ENST00000474270 IQGAP3Q86VI3 1631 aa19.58■□□□□ 0.72
ABCD4-207ENST00000474270 RPRD2Q5VT52 1461 aaKnown RBP19.55■□□□□ 0.72
ABCD4-207ENST00000474270 TMEM131LA2VDJ0 1609 aa19.55■□□□□ 0.72
ABCD4-207ENST00000474270 CHD2O14647 1828 aaKnown RBP19.54■□□□□ 0.72
ABCD4-207ENST00000474270 ITGAEP38570 1179 aa19.53■□□□□ 0.72
ABCD4-207ENST00000474270 SLC26A8Q96RN1 970 aa19.52■□□□□ 0.72
ABCD4-207ENST00000474270 BCANQ96GW7 911 aa19.51■□□□□ 0.71
ABCD4-207ENST00000474270 SPHKAPQ2M3C7 1700 aa19.51■□□□□ 0.71
ABCD4-207ENST00000474270 RRBP1Q9P2E9 1410 aaKnown RBP19.51■□□□□ 0.71
ABCD4-207ENST00000474270 RBM33Q96EV2 1170 aaKnown RBP19.5■□□□□ 0.71
ABCD4-207ENST00000474270 ROCK1Q13464 1354 aa19.49■□□□□ 0.71
ABCD4-207ENST00000474270 TMEM94Q12767 1356 aa19.48■□□□□ 0.71
ABCD4-207ENST00000474270 KCNA6P17658 529 aa19.48■□□□□ 0.71
ABCD4-207ENST00000474270 PROSER2Q86WR7 435 aaPredicted RBP19.48■□□□□ 0.71
ABCD4-207ENST00000474270 NWD1Q149M9 1564 aa19.48■□□□□ 0.71
ABCD4-207ENST00000474270 SLC52A1Q9NWF4 448 aa19.47■□□□□ 0.71
ABCD4-207ENST00000474270 ZFYVE9O95405 1425 aa19.45■□□□□ 0.7
ABCD4-207ENST00000474270 ROBO1Q9Y6N7 1651 aa19.44■□□□□ 0.7
ABCD4-207ENST00000474270 RIMS2Q9UQ26 1411 aa19.43■□□□□ 0.7
ABCD4-207ENST00000474270 CHGAP10645 457 aaKnown RBP19.43■□□□□ 0.7
ABCD4-207ENST00000474270 FAM135BQ49AJ0 1406 aa19.42■□□□□ 0.7
ABCD4-207ENST00000474270 NUP155O75694 1391 aa19.42■□□□□ 0.7
ABCD4-207ENST00000474270 PPP1R15AO75807 674 aaPredicted RBP19.41■□□□□ 0.7
ABCD4-207ENST00000474270 KIF1BO60333 1816 aa19.41■□□□□ 0.7
ABCD4-207ENST00000474270 RGS17Q9UGC6 210 aaPredicted RBP19.4■□□□□ 0.7
ABCD4-207ENST00000474270 NKTRP30414 1462 aaKnown RBP19.4■□□□□ 0.7
ABCD4-207ENST00000474270 PLEKHG1Q9ULL1 1385 aa19.39■□□□□ 0.69
ABCD4-207ENST00000474270 NUTM2DQ5VT03 806 aaPredicted RBP19.38■□□□□ 0.69
ABCD4-207ENST00000474270 PHLPP1O60346 1717 aa19.37■□□□□ 0.69
ABCD4-207ENST00000474270 MSH6P52701 1360 aa19.36■□□□□ 0.69
ABCD4-207ENST00000474270 HDGFP51858 240 aaKnown RBP19.36■□□□□ 0.69
ABCD4-207ENST00000474270 CLTCL1P53675 1640 aa19.35■□□□□ 0.69
ABCD4-207ENST00000474270 DIP2AQ14689 1571 aa19.35■□□□□ 0.69
ABCD4-207ENST00000474270 NRXN3Q9Y4C0 1643 aa19.34■□□□□ 0.69
ABCD4-207ENST00000474270 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.34■□□□□ 0.69
ABCD4-207ENST00000474270 SLAIN2Q9P270 581 aa19.32■□□□□ 0.68
ABCD4-207ENST00000474270 POTEAQ6S8J7 498 aa19.31■□□□□ 0.68
ABCD4-207ENST00000474270 C14orf37Q86TY3 774 aa19.31■□□□□ 0.68
ABCD4-207ENST00000474270 ADAMTS13Q76LX8 1427 aa19.31■□□□□ 0.68
ABCD4-207ENST00000474270 TRPM2O94759 1503 aa19.3■□□□□ 0.68
ABCD4-207ENST00000474270 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.3■□□□□ 0.68
ABCD4-207ENST00000474270 TBX22Q9Y458 520 aa19.29■□□□□ 0.68
ABCD4-207ENST00000474270 NAIPQ13075 1403 aa19.28■□□□□ 0.68
ABCD4-207ENST00000474270 CCER1Q8TC90 406 aaPredicted RBP19.28■□□□□ 0.68
ABCD4-207ENST00000474270 XRN1Q8IZH2 1706 aaKnown RBP19.27■□□□□ 0.68
ABCD4-207ENST00000474270 SETBP1Q9Y6X0 1596 aa19.25■□□□□ 0.67
ABCD4-207ENST00000474270 CLSPNQ9HAW4 1339 aa19.25■□□□□ 0.67
ABCD4-207ENST00000474270 JCADQ9P266 1359 aa19.24■□□□□ 0.67
ABCD4-207ENST00000474270 NEXMIFQ5QGS0 1516 aa19.24■□□□□ 0.67
ABCD4-207ENST00000474270 COL16A1Q07092 1604 aaPredicted RBP19.23■□□□□ 0.67
ABCD4-207ENST00000474270 ZNF326Q5BKZ1 582 aaKnown RBP19.23■□□□□ 0.67
ABCD4-207ENST00000474270 PTPRUQ92729 1446 aa19.23■□□□□ 0.67
ABCD4-207ENST00000474270 PPLO60437 1756 aa19.22■□□□□ 0.67
ABCD4-207ENST00000474270 SETD1AO15047 1707 aaKnown RBP19.22■□□□□ 0.67
ABCD4-207ENST00000474270 PIK3R4Q99570 1358 aa19.21■□□□□ 0.67
ABCD4-207ENST00000474270 ATF3P18847 181 aa19.21■□□□□ 0.67
ABCD4-207ENST00000474270 NALCNQ8IZF0 1738 aa19.21■□□□□ 0.67
ABCD4-207ENST00000474270 NCOA3Q9Y6Q9 1424 aa19.2■□□□□ 0.66
ABCD4-207ENST00000474270 CADPS2Q86UW7 1296 aa19.2■□□□□ 0.66
ABCD4-207ENST00000474270 C19orf44Q9H6X5 657 aa19.2■□□□□ 0.66
ABCD4-207ENST00000474270 AMOTL2Q9Y2J4 779 aa19.2■□□□□ 0.66
ABCD4-207ENST00000474270 TRIM52Q96A61 297 aa19.19■□□□□ 0.66
ABCD4-207ENST00000474270 HFM1A2PYH4 1435 aa19.18■□□□□ 0.66
ABCD4-207ENST00000474270 MEX3CQ5U5Q3 659 aaKnown RBP19.18■□□□□ 0.66
ABCD4-207ENST00000474270 ACIN1Q9UKV3 1341 aaKnown RBP19.17■□□□□ 0.66
ABCD4-207ENST00000474270 SHPRHQ149N8 1683 aa19.16■□□□□ 0.66
ABCD4-207ENST00000474270 AHDC1Q5TGY3 1603 aaPredicted RBP19.14■□□□□ 0.66
ABCD4-207ENST00000474270 METP08581 1390 aa19.14■□□□□ 0.65
ABCD4-207ENST00000474270 SPATA31A6Q5VVP1 1343 aa19.13■□□□□ 0.65
ABCD4-207ENST00000474270 NHSL1Q5SYE7 1610 aa19.13■□□□□ 0.65
ABCD4-207ENST00000474270 IFT172Q9UG01 1749 aa19.13■□□□□ 0.65
ABCD4-207ENST00000474270 LRP6O75581 1613 aa19.12■□□□□ 0.65
ABCD4-207ENST00000474270 BRINP3Q76B58 766 aa19.12■□□□□ 0.65
ABCD4-207ENST00000474270 NUTM2BA6NNL0 878 aaPredicted RBP19.1■□□□□ 0.65
ABCD4-207ENST00000474270 NUTM2EB1AL46 878 aaPredicted RBP19.1■□□□□ 0.65
ABCD4-207ENST00000474270 NUTM2AQ8IVF1 878 aaPredicted RBP19.1■□□□□ 0.65
ABCD4-207ENST00000474270 SLC4A1APQ9BWU0 796 aaKnown RBP19.1■□□□□ 0.65
ABCD4-207ENST00000474270 SETD5Q9C0A6 1442 aa19.08■□□□□ 0.65
ABCD4-207ENST00000474270 ZNF772Q68DY9 489 aaPredicted RBP19.08■□□□□ 0.64
ABCD4-207ENST00000474270 ASXL1Q8IXJ9 1541 aa19.08■□□□□ 0.64
ABCD4-207ENST00000474270 FOXD1Q16676 465 aa19.07■□□□□ 0.64
ABCD4-207ENST00000474270 DCCP43146 1447 aa19.07■□□□□ 0.64
ABCD4-207ENST00000474270 MST1RQ04912 1400 aa19.06■□□□□ 0.64
ABCD4-207ENST00000474270 ADGRL3Q9HAR2 1447 aa19.04■□□□□ 0.64
ABCD4-207ENST00000474270 DDX17Q92841 729 aaKnown RBP19.03■□□□□ 0.64
ABCD4-207ENST00000474270 VGFO15240 615 aaPredicted RBP19.01■□□□□ 0.63
ABCD4-207ENST00000474270 RXRBP28702 533 aa19■□□□□ 0.63
ABCD4-207ENST00000474270 RAB3GAP2Q9H2M9 1393 aa18.99■□□□□ 0.63
ABCD4-207ENST00000474270 LRRC59Q96AG4 307 aaKnown RBP18.99■□□□□ 0.63
ABCD4-207ENST00000474270 CCDC144AA2RUR9 1427 aa18.99■□□□□ 0.63
ABCD4-207ENST00000474270 PTCH1Q13635 1447 aa18.99■□□□□ 0.63
ABCD4-207ENST00000474270 AFF2P51816 1311 aa18.99■□□□□ 0.63
ABCD4-207ENST00000474270 DHX57Q6P158 1386 aaKnown RBP18.98■□□□□ 0.63
ABCD4-207ENST00000474270 ROBO2Q9HCK4 1378 aa18.98■□□□□ 0.63
ABCD4-207ENST00000474270 KNDC1Q76NI1 1749 aa18.98■□□□□ 0.63
ABCD4-207ENST00000474270 UPF1Q92900 1129 aaKnown RBP eCLIP18.98■□□□□ 0.63
ABCD4-207ENST00000474270 RPGRIP1LQ68CZ1 1315 aa18.98■□□□□ 0.63
ABCD4-207ENST00000474270 LAMC1P11047 1609 aa18.97■□□□□ 0.63
ABCD4-207ENST00000474270 RGPD8O14715 1765 aaPredicted RBP18.97■□□□□ 0.63
ABCD4-207ENST00000474270 C8orf37Q96NL8 207 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms