RNA–Protein interactions for RNA: ENST00000473797.1

GPCPD1-204, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-204ENST00000473797 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.49□□□□□ -0.73
GPCPD1-204ENST00000473797 PXYLP1Q8TE99 480 aa10.49□□□□□ -0.73
GPCPD1-204ENST00000473797 GPR37O15354 613 aa10.48□□□□□ -0.73
GPCPD1-204ENST00000473797 FAM161AQ3B820 660 aa10.48□□□□□ -0.73
GPCPD1-204ENST00000473797 GNPATO15228 680 aa10.46□□□□□ -0.73
GPCPD1-204ENST00000473797 PPP1R18Q6NYC8 613 aa10.46□□□□□ -0.73
GPCPD1-204ENST00000473797 VSIG10Q8N0Z9 540 aa10.45□□□□□ -0.74
GPCPD1-204ENST00000473797 ZPR1O75312 459 aa10.44□□□□□ -0.74
GPCPD1-204ENST00000473797 METTL3Q86U44 580 aaKnown RBP10.44□□□□□ -0.74
GPCPD1-204ENST00000473797 ACTN4O43707 911 aaKnown RBP10.43□□□□□ -0.74
GPCPD1-204ENST00000473797 NKX2-3Q8TAU0 364 aa10.43□□□□□ -0.74
GPCPD1-204ENST00000473797 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.43□□□□□ -0.74
GPCPD1-204ENST00000473797 PCDHB3Q9Y5E6 796 aa10.43□□□□□ -0.74
GPCPD1-204ENST00000473797 SLC10A3P09131 477 aa10.42□□□□□ -0.74
GPCPD1-204ENST00000473797 FECHP22830 423 aa10.42□□□□□ -0.74
GPCPD1-204ENST00000473797 COPS2P61201 443 aa10.42□□□□□ -0.74
GPCPD1-204ENST00000473797 TMUB1Q9BVT8 246 aa10.42□□□□□ -0.74
GPCPD1-204ENST00000473797 KMT5BQ4FZB7 885 aa10.41□□□□□ -0.74
GPCPD1-204ENST00000473797 V9GY48 417 aaPredicted RBP10.41□□□□□ -0.74
GPCPD1-204ENST00000473797 BLOC1S3Q6QNY0 202 aa10.39□□□□□ -0.75
GPCPD1-204ENST00000473797 CFHP08603 1231 aa10.38□□□□□ -0.75
GPCPD1-204ENST00000473797 GGCXP38435 758 aa10.37□□□□□ -0.75
GPCPD1-204ENST00000473797 PRKD2Q9BZL6 878 aa10.37□□□□□ -0.75
GPCPD1-204ENST00000473797 LAPTM4AQ15012 233 aa10.36□□□□□ -0.75
GPCPD1-204ENST00000473797 RSPH4AQ5TD94 716 aa10.36□□□□□ -0.75
GPCPD1-204ENST00000473797 DAXXQ9UER7 740 aaPredicted RBP10.36□□□□□ -0.75
GPCPD1-204ENST00000473797 GPIHBP1Q8IV16 184 aa10.35□□□□□ -0.75
GPCPD1-204ENST00000473797 PHOX2BQ99453 314 aa10.32□□□□□ -0.76
GPCPD1-204ENST00000473797 NR1I2O75469 434 aa10.31□□□□□ -0.76
GPCPD1-204ENST00000473797 RNF223E7ERA6 249 aa10.3□□□□□ -0.76
GPCPD1-204ENST00000473797 SCUBE3Q8IX30 993 aa10.29□□□□□ -0.76
GPCPD1-204ENST00000473797 TLL1O43897 1013 aa10.28□□□□□ -0.76
GPCPD1-204ENST00000473797 GFRA3O60609 400 aa10.28□□□□□ -0.76
GPCPD1-204ENST00000473797 ANKLE1Q8NAG6 615 aa10.28□□□□□ -0.76
GPCPD1-204ENST00000473797 ADH1BP00325 375 aa10.27□□□□□ -0.77
GPCPD1-204ENST00000473797 SULF1Q8IWU6 871 aa10.27□□□□□ -0.77
GPCPD1-204ENST00000473797 TULP1O00294 542 aaPredicted RBP10.26□□□□□ -0.77
GPCPD1-204ENST00000473797 MAP2K5Q13163 448 aa10.26□□□□□ -0.77
GPCPD1-204ENST00000473797 Q6ZNB5 142 aa10.26□□□□□ -0.77
GPCPD1-204ENST00000473797 EMID1Q96A84 441 aaPredicted RBP10.26□□□□□ -0.77
GPCPD1-204ENST00000473797 NRG2O14511 850 aaPredicted RBP10.25□□□□□ -0.77
GPCPD1-204ENST00000473797 GCGRP47871 477 aa10.25□□□□□ -0.77
GPCPD1-204ENST00000473797 DDX11L8A8MPP1 907 aa10.24□□□□□ -0.77
GPCPD1-204ENST00000473797 MORN1Q5T089 497 aa10.24□□□□□ -0.77
GPCPD1-204ENST00000473797 NLRP7Q8WX94 980 aa10.24□□□□□ -0.77
GPCPD1-204ENST00000473797 IRF6O14896 467 aa10.23□□□□□ -0.77
GPCPD1-204ENST00000473797 S1PR4O95977 384 aa10.23□□□□□ -0.77
GPCPD1-204ENST00000473797 ATP6V1AP38606 617 aa10.23□□□□□ -0.77
GPCPD1-204ENST00000473797 SLC19A1P41440 591 aa10.23□□□□□ -0.77
GPCPD1-204ENST00000473797 PUS10Q3MIT2 529 aaKnown RBP10.23□□□□□ -0.77
GPCPD1-204ENST00000473797 RDH13Q8NBN7 331 aa10.23□□□□□ -0.77
GPCPD1-204ENST00000473797 MINK1Q8N4C8 1332 aaPredicted RBP10.23□□□□□ -0.77
GPCPD1-204ENST00000473797 THAP11Q96EK4 314 aa10.22□□□□□ -0.77
GPCPD1-204ENST00000473797 SLC6A16Q9GZN6 736 aa10.22□□□□□ -0.77
GPCPD1-204ENST00000473797 SALL2Q9Y467 1007 aaPredicted RBP10.22□□□□□ -0.77
GPCPD1-204ENST00000473797 LCE2BO14633 110 aa10.21□□□□□ -0.77
GPCPD1-204ENST00000473797 FUT2Q10981 343 aa10.21□□□□□ -0.77
GPCPD1-204ENST00000473797 SPSB2Q99619 263 aa10.21□□□□□ -0.77
GPCPD1-204ENST00000473797 PPEF1O14829 653 aaPredicted RBP10.2□□□□□ -0.78
GPCPD1-204ENST00000473797 SPRYD7Q5W111 196 aa10.19□□□□□ -0.78
GPCPD1-204ENST00000473797 TRAF7Q6Q0C0 670 aa10.19□□□□□ -0.78
GPCPD1-204ENST00000473797 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.19□□□□□ -0.78
GPCPD1-204ENST00000473797 PDZRN3Q9UPQ7 1066 aa10.19□□□□□ -0.78
GPCPD1-204ENST00000473797 CD46P15529 392 aa10.18□□□□□ -0.78
GPCPD1-204ENST00000473797 LIAT1Q6ZQX7 453 aa10.18□□□□□ -0.78
GPCPD1-204ENST00000473797 TRIM67Q6ZTA4 783 aa10.18□□□□□ -0.78
GPCPD1-204ENST00000473797 ZNF598Q86UK7 904 aaKnown RBP10.18□□□□□ -0.78
GPCPD1-204ENST00000473797 SLC27A5Q9Y2P5 690 aa10.17□□□□□ -0.78
GPCPD1-204ENST00000473797 FMNL1O95466 1100 aaPredicted RBP10.15□□□□□ -0.78
GPCPD1-204ENST00000473797 PRR20EP86478 221 aa10.15□□□□□ -0.78
GPCPD1-204ENST00000473797 PRR20CP86479 221 aa10.15□□□□□ -0.78
GPCPD1-204ENST00000473797 PRR20DP86480 221 aa10.15□□□□□ -0.78
GPCPD1-204ENST00000473797 PRR20BP86481 221 aa10.15□□□□□ -0.78
GPCPD1-204ENST00000473797 PRR20AP86496 221 aa10.15□□□□□ -0.78
GPCPD1-204ENST00000473797 GRIPAP1Q4V328 841 aa10.15□□□□□ -0.78
GPCPD1-204ENST00000473797 BRICD5Q6PL45 260 aa10.15□□□□□ -0.78
GPCPD1-204ENST00000473797 PLA2G2CQ5R387 149 aa10.14□□□□□ -0.79
GPCPD1-204ENST00000473797 FAM160A2Q8N612 972 aaPredicted RBP10.14□□□□□ -0.79
GPCPD1-204ENST00000473797 CCDC102AQ96A19 550 aa10.13□□□□□ -0.79
GPCPD1-204ENST00000473797 MDM2Q00987 491 aaPredicted RBP10.11□□□□□ -0.79
GPCPD1-204ENST00000473797 MSS51Q4VC12 460 aa10.11□□□□□ -0.79
GPCPD1-204ENST00000473797 GDF9O60383 454 aa10.1□□□□□ -0.79
GPCPD1-204ENST00000473797 RPIAP49247 311 aa10.1□□□□□ -0.79
GPCPD1-204ENST00000473797 USP46P62068 366 aa10.1□□□□□ -0.79
GPCPD1-204ENST00000473797 ZNF697Q5TEC3 545 aa10.1□□□□□ -0.79
GPCPD1-204ENST00000473797 KDM4AO75164 1064 aa10.09□□□□□ -0.79
GPCPD1-204ENST00000473797 CLCN1P35523 988 aa10.08□□□□□ -0.8
GPCPD1-204ENST00000473797 Q3C1V9 767 aa10.08□□□□□ -0.8
GPCPD1-204ENST00000473797 LMOD2Q6P5Q4 547 aa10.08□□□□□ -0.8
GPCPD1-204ENST00000473797 GPCPD1Q9NPB8 672 aa10.08□□□□□ -0.8
GPCPD1-204ENST00000473797 RNF19BQ6ZMZ0 732 aa10.07□□□□□ -0.8
GPCPD1-204ENST00000473797 FAM217BQ9NTX9 383 aaPredicted RBP10.07□□□□□ -0.8
GPCPD1-204ENST00000473797 DGAT1O75907 488 aa10.06□□□□□ -0.8
GPCPD1-204ENST00000473797 BARGINQ6ZT62 677 aa10.06□□□□□ -0.8
GPCPD1-204ENST00000473797 FCF1Q9Y324 198 aaKnown RBP10.06□□□□□ -0.8
GPCPD1-204ENST00000473797 ZMYND10O75800 440 aa10.05□□□□□ -0.8
GPCPD1-204ENST00000473797 MMP16P51512 607 aa10.05□□□□□ -0.8
GPCPD1-204ENST00000473797 PKD2L1Q9P0L9 805 aa10.04□□□□□ -0.8
GPCPD1-204ENST00000473797 HOXA2O43364 376 aa10.03□□□□□ -0.8
GPCPD1-204ENST00000473797 CD2BP2O95400 341 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms