RNA–Protein interactions for RNA: ENST00000472518.1

RTKN-207, Transcript of rhotekin, humanhuman

TSL 1 (best)

Gene RTKN, Length 1,105 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-207ENST00000472518 TMEM131LA2VDJ0 1609 aa21.36■■□□□ 1.01
RTKN-207ENST00000472518 NKTRP30414 1462 aaKnown RBP21.35■■□□□ 1.01
RTKN-207ENST00000472518 KCNA6P17658 529 aa21.35■■□□□ 1.01
RTKN-207ENST00000472518 ZFYVE9O95405 1425 aa21.35■■□□□ 1.01
RTKN-207ENST00000472518 NWD1Q149M9 1564 aa21.34■■□□□ 1.01
RTKN-207ENST00000472518 PLEKHG1Q9ULL1 1385 aa21.34■■□□□ 1.01
RTKN-207ENST00000472518 MYO5BQ9ULV0 1848 aa21.34■■□□□ 1.01
RTKN-207ENST00000472518 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.33■■□□□ 1.01
RTKN-207ENST00000472518 NUP155O75694 1391 aa21.33■■□□□ 1
RTKN-207ENST00000472518 RRBP1Q9P2E9 1410 aaKnown RBP21.32■■□□□ 1
RTKN-207ENST00000472518 RIMS2Q9UQ26 1411 aa21.31■■□□□ 1
RTKN-207ENST00000472518 POTEAQ6S8J7 498 aa21.3■■□□□ 1
RTKN-207ENST00000472518 PPP1R15AO75807 674 aaPredicted RBP21.29■■□□□ 1
RTKN-207ENST00000472518 FAM135BQ49AJ0 1406 aa21.29■■□□□ 1
RTKN-207ENST00000472518 DIP2AQ14689 1571 aa21.28■■□□□ 1
RTKN-207ENST00000472518 TMEM94Q12767 1356 aa21.28■■□□□ 1
RTKN-207ENST00000472518 ITGAEP38570 1179 aa21.27■■□□□ 1
RTKN-207ENST00000472518 BCANQ96GW7 911 aa21.27■■□□□ 1
RTKN-207ENST00000472518 SLC26A8Q96RN1 970 aa21.27■■□□□ 1
RTKN-207ENST00000472518 ROBO1Q9Y6N7 1651 aa21.26■□□□□ 0.99
RTKN-207ENST00000472518 CHD2O14647 1828 aaKnown RBP21.26■□□□□ 0.99
RTKN-207ENST00000472518 SPHKAPQ2M3C7 1700 aa21.25■□□□□ 0.99
RTKN-207ENST00000472518 RBM33Q96EV2 1170 aaKnown RBP21.25■□□□□ 0.99
RTKN-207ENST00000472518 PIK3R4Q99570 1358 aa21.24■□□□□ 0.99
RTKN-207ENST00000472518 TBX22Q9Y458 520 aa21.24■□□□□ 0.99
RTKN-207ENST00000472518 NCOA3Q9Y6Q9 1424 aa21.23■□□□□ 0.99
RTKN-207ENST00000472518 PROSER2Q86WR7 435 aaPredicted RBP21.23■□□□□ 0.99
RTKN-207ENST00000472518 SETD1AO15047 1707 aaKnown RBP21.22■□□□□ 0.99
RTKN-207ENST00000472518 CHGAP10645 457 aaKnown RBP21.22■□□□□ 0.99
RTKN-207ENST00000472518 MSH6P52701 1360 aa21.22■□□□□ 0.99
RTKN-207ENST00000472518 PPARGC1BQ86YN6 1023 aaKnown RBP21.19■□□□□ 0.98
RTKN-207ENST00000472518 NAIPQ13075 1403 aa21.19■□□□□ 0.98
RTKN-207ENST00000472518 SRCAPQ6ZRS2 3230 aa21.18■□□□□ 0.98
RTKN-207ENST00000472518 ADAMTS13Q76LX8 1427 aa21.17■□□□□ 0.98
RTKN-207ENST00000472518 TRPM2O94759 1503 aa21.17■□□□□ 0.98
RTKN-207ENST00000472518 HFM1A2PYH4 1435 aa21.16■□□□□ 0.98
RTKN-207ENST00000472518 SETBP1Q9Y6X0 1596 aa21.13■□□□□ 0.97
RTKN-207ENST00000472518 KIF1BO60333 1816 aa21.12■□□□□ 0.97
RTKN-207ENST00000472518 PHLPP1O60346 1717 aa21.1■□□□□ 0.97
RTKN-207ENST00000472518 COL16A1Q07092 1604 aaPredicted RBP21.1■□□□□ 0.97
RTKN-207ENST00000472518 LRP6O75581 1613 aa21.09■□□□□ 0.97
RTKN-207ENST00000472518 CLTCL1P53675 1640 aa21.08■□□□□ 0.97
RTKN-207ENST00000472518 SLAIN2Q9P270 581 aa21.08■□□□□ 0.97
RTKN-207ENST00000472518 ZNF326Q5BKZ1 582 aaKnown RBP21.07■□□□□ 0.96
RTKN-207ENST00000472518 CADPS2Q86UW7 1296 aa21.07■□□□□ 0.96
RTKN-207ENST00000472518 NRXN3Q9Y4C0 1643 aa21.07■□□□□ 0.96
RTKN-207ENST00000472518 DCCP43146 1447 aa21.06■□□□□ 0.96
RTKN-207ENST00000472518 C19orf44Q9H6X5 657 aa21.06■□□□□ 0.96
RTKN-207ENST00000472518 ACIN1Q9UKV3 1341 aaKnown RBP21.05■□□□□ 0.96
RTKN-207ENST00000472518 NEXMIFQ5QGS0 1516 aa21.05■□□□□ 0.96
RTKN-207ENST00000472518 XRN1Q8IZH2 1706 aaKnown RBP21.05■□□□□ 0.96
RTKN-207ENST00000472518 NUTM2DQ5VT03 806 aaPredicted RBP21.05■□□□□ 0.96
RTKN-207ENST00000472518 C14orf37Q86TY3 774 aa21.05■□□□□ 0.96
RTKN-207ENST00000472518 JCADQ9P266 1359 aa21.05■□□□□ 0.96
RTKN-207ENST00000472518 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.04■□□□□ 0.96
RTKN-207ENST00000472518 AMOTL2Q9Y2J4 779 aa21.03■□□□□ 0.96
RTKN-207ENST00000472518 ATF3P18847 181 aa21.02■□□□□ 0.96
RTKN-207ENST00000472518 TRIM52Q96A61 297 aa21.02■□□□□ 0.96
RTKN-207ENST00000472518 RPGRIP1LQ68CZ1 1315 aa21.01■□□□□ 0.95
RTKN-207ENST00000472518 SLC4A1APQ9BWU0 796 aaKnown RBP21■□□□□ 0.95
RTKN-207ENST00000472518 PTPRUQ92729 1446 aa21■□□□□ 0.95
RTKN-207ENST00000472518 AHDC1Q5TGY3 1603 aaPredicted RBP20.98■□□□□ 0.95
RTKN-207ENST00000472518 VGFO15240 615 aaPredicted RBP20.98■□□□□ 0.95
RTKN-207ENST00000472518 UPF1Q92900 1129 aaKnown RBP eCLIP20.94■□□□□ 0.943e-7■□□□□ 8.3
RTKN-207ENST00000472518 METP08581 1390 aa20.94■□□□□ 0.94
RTKN-207ENST00000472518 PRAG1Q86YV5 1406 aa20.94■□□□□ 0.94
RTKN-207ENST00000472518 SHPRHQ149N8 1683 aa20.93■□□□□ 0.94
RTKN-207ENST00000472518 PPLO60437 1756 aa20.93■□□□□ 0.94
RTKN-207ENST00000472518 PTCH1Q13635 1447 aa20.93■□□□□ 0.94
RTKN-207ENST00000472518 ADGRL3Q9HAR2 1447 aa20.93■□□□□ 0.94
RTKN-207ENST00000472518 SPATA31A6Q5VVP1 1343 aa20.91■□□□□ 0.94
RTKN-207ENST00000472518 CCDC144AA2RUR9 1427 aa20.9■□□□□ 0.94
RTKN-207ENST00000472518 MST1RQ04912 1400 aa20.87■□□□□ 0.93
RTKN-207ENST00000472518 BRINP3Q76B58 766 aa20.87■□□□□ 0.93
RTKN-207ENST00000472518 ASXL1Q8IXJ9 1541 aa20.87■□□□□ 0.93
RTKN-207ENST00000472518 NALCNQ8IZF0 1738 aa20.87■□□□□ 0.93
RTKN-207ENST00000472518 NHSL1Q5SYE7 1610 aa20.86■□□□□ 0.93
RTKN-207ENST00000472518 MEX3CQ5U5Q3 659 aaKnown RBP20.85■□□□□ 0.93
RTKN-207ENST00000472518 ANKRD30BQ9BXX2 1392 aa20.85■□□□□ 0.93
RTKN-207ENST00000472518 ZNF772Q68DY9 489 aaPredicted RBP20.83■□□□□ 0.93
RTKN-207ENST00000472518 MPHOSPH9Q99550 1183 aa20.83■□□□□ 0.93
RTKN-207ENST00000472518 SETD5Q9C0A6 1442 aa20.83■□□□□ 0.93
RTKN-207ENST00000472518 IFT172Q9UG01 1749 aa20.81■□□□□ 0.92
RTKN-207ENST00000472518 SPATA31E1Q6ZUB1 1445 aa20.81■□□□□ 0.92
RTKN-207ENST00000472518 EP400Q96L91 3159 aa20.81■□□□□ 0.92
RTKN-207ENST00000472518 CDK12Q9NYV4 1490 aaPredicted RBP20.8■□□□□ 0.92
RTKN-207ENST00000472518 NUTM2BA6NNL0 878 aaPredicted RBP20.79■□□□□ 0.92
RTKN-207ENST00000472518 NUTM2EB1AL46 878 aaPredicted RBP20.79■□□□□ 0.92
RTKN-207ENST00000472518 NUTM2AQ8IVF1 878 aaPredicted RBP20.79■□□□□ 0.92
RTKN-207ENST00000472518 LAMC1P11047 1609 aa20.78■□□□□ 0.92
RTKN-207ENST00000472518 ROBO2Q9HCK4 1378 aa20.78■□□□□ 0.92
RTKN-207ENST00000472518 LRRC59Q96AG4 307 aaKnown RBP20.78■□□□□ 0.92
RTKN-207ENST00000472518 RGS12O14924 1447 aa20.78■□□□□ 0.92
RTKN-207ENST00000472518 AFF2P51816 1311 aa20.78■□□□□ 0.92
RTKN-207ENST00000472518 C1orf167Q5SNV9 1468 aa20.77■□□□□ 0.92
RTKN-207ENST00000472518 RXRBP28702 533 aa20.77■□□□□ 0.92
RTKN-207ENST00000472518 TECPR2O15040 1411 aa20.77■□□□□ 0.91
RTKN-207ENST00000472518 FOXD1Q16676 465 aa20.76■□□□□ 0.91
RTKN-207ENST00000472518 CDC42BPGQ6DT37 1551 aa20.76■□□□□ 0.91
RTKN-207ENST00000472518 DDX17Q92841 729 aaKnown RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms