RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 AGLP35573 1532 aa7.62□□□□□ -1.19
LMNB1-205ENST00000472034 RNF17Q9BXT8 1623 aaKnown RBP7.61□□□□□ -1.19
LMNB1-205ENST00000472034 PLCG2P16885 1265 aa7.61□□□□□ -1.19
LMNB1-205ENST00000472034 IFFO2Q5TF58 517 aa7.61□□□□□ -1.19
LMNB1-205ENST00000472034 PAXIP1Q6ZW49 1069 aaPredicted RBP7.61□□□□□ -1.19
LMNB1-205ENST00000472034 CFAP44Q96MT7 982 aa7.61□□□□□ -1.19
LMNB1-205ENST00000472034 POLR1AO95602 1720 aaPredicted RBP7.61□□□□□ -1.19
LMNB1-205ENST00000472034 CNTLNQ9NXG0 1405 aa7.61□□□□□ -1.19
LMNB1-205ENST00000472034 REREQ9P2R6 1566 aa7.6□□□□□ -1.19
LMNB1-205ENST00000472034 OCEL1Q9H607 264 aa7.6□□□□□ -1.19
LMNB1-205ENST00000472034 KDM5CP41229 1560 aa7.59□□□□□ -1.19
LMNB1-205ENST00000472034 G3V3G9 751 aa7.59□□□□□ -1.19
LMNB1-205ENST00000472034 MROH2AA6NES4 1674 aa7.59□□□□□ -1.19
LMNB1-205ENST00000472034 PLCH2O75038 1416 aa7.59□□□□□ -1.19
LMNB1-205ENST00000472034 DNMT1P26358 1616 aaKnown RBP7.59□□□□□ -1.19
LMNB1-205ENST00000472034 PLEKHD1A6NEE1 506 aa7.58□□□□□ -1.2
LMNB1-205ENST00000472034 POTEIP0CG38 1075 aa7.58□□□□□ -1.2
LMNB1-205ENST00000472034 NKX1-1Q15270 411 aaPredicted RBP7.58□□□□□ -1.2
LMNB1-205ENST00000472034 MFRPQ9BY79 579 aa7.58□□□□□ -1.2
LMNB1-205ENST00000472034 METRNQ9UJH8 293 aa7.58□□□□□ -1.2
LMNB1-205ENST00000472034 PHF8Q9UPP1 1060 aa7.58□□□□□ -1.2
LMNB1-205ENST00000472034 CLTCQ00610 1675 aaKnown RBP7.57□□□□□ -1.2
LMNB1-205ENST00000472034 ZNF518AQ6AHZ1 1483 aa7.57□□□□□ -1.2
LMNB1-205ENST00000472034 SUPT5HO00267 1087 aaKnown RBP7.57□□□□□ -1.2
LMNB1-205ENST00000472034 PLCB2Q00722 1185 aa7.57□□□□□ -1.2
LMNB1-205ENST00000472034 PELP1Q8IZL8 1130 aaKnown RBP7.57□□□□□ -1.2
LMNB1-205ENST00000472034 RBM33Q96EV2 1170 aaKnown RBP7.57□□□□□ -1.2
LMNB1-205ENST00000472034 LRP6O75581 1613 aa7.56□□□□□ -1.2
LMNB1-205ENST00000472034 IRX5P78411 483 aaPredicted RBP7.56□□□□□ -1.2
LMNB1-205ENST00000472034 A2ML1A8K2U0 1454 aa7.55□□□□□ -1.2
LMNB1-205ENST00000472034 GTPBP6O43824 516 aaPredicted RBP7.55□□□□□ -1.2
LMNB1-205ENST00000472034 XIRP1Q702N8 1843 aaKnown RBP7.55□□□□□ -1.2
LMNB1-205ENST00000472034 NPHP4O75161 1426 aaPredicted RBP7.54□□□□□ -1.2
LMNB1-205ENST00000472034 FAM135BQ49AJ0 1406 aa7.54□□□□□ -1.2
LMNB1-205ENST00000472034 EFCAB2Q5VUJ9 269 aa7.54□□□□□ -1.2
LMNB1-205ENST00000472034 FBXO22Q8NEZ5 403 aa7.54□□□□□ -1.2
LMNB1-205ENST00000472034 L3MBTL3Q96JM7 780 aaPredicted RBP7.54□□□□□ -1.2
LMNB1-205ENST00000472034 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.54□□□□□ -1.29e-7■■■■□ 23.3
LMNB1-205ENST00000472034 RXRBP28702 533 aa7.53□□□□□ -1.2
LMNB1-205ENST00000472034 MLH3Q9UHC1 1453 aa7.53□□□□□ -1.2
LMNB1-205ENST00000472034 SYNMO15061 1565 aa7.53□□□□□ -1.2
LMNB1-205ENST00000472034 ROBO1Q9Y6N7 1651 aa7.53□□□□□ -1.2
LMNB1-205ENST00000472034 CDK13Q14004 1512 aaKnown RBP7.52□□□□□ -1.2
LMNB1-205ENST00000472034 EP400Q96L91 3159 aa7.52□□□□□ -1.21
LMNB1-205ENST00000472034 KIDINS220Q9ULH0 1771 aa7.52□□□□□ -1.21
LMNB1-205ENST00000472034 RGS12O14924 1447 aa7.52□□□□□ -1.21
LMNB1-205ENST00000472034 ITSN2Q9NZM3 1697 aa7.51□□□□□ -1.21
LMNB1-205ENST00000472034 SAMD9Q5K651 1589 aa7.51□□□□□ -1.21
LMNB1-205ENST00000472034 ANKLE2Q86XL3 938 aa7.51□□□□□ -1.21
LMNB1-205ENST00000472034 FAM9AQ8IZU1 332 aaPredicted RBP7.51□□□□□ -1.21
LMNB1-205ENST00000472034 MYO5CQ9NQX4 1742 aa7.51□□□□□ -1.21
LMNB1-205ENST00000472034 ABCC1P33527 1531 aa7.51□□□□□ -1.21
LMNB1-205ENST00000472034 IQGAP1P46940 1657 aa7.51□□□□□ -1.21
LMNB1-205ENST00000472034 MED14O60244 1454 aa7.5□□□□□ -1.21
LMNB1-205ENST00000472034 MEX3CQ5U5Q3 659 aaKnown RBP7.5□□□□□ -1.21
LMNB1-205ENST00000472034 FBXO31Q5XUX0 539 aaPredicted RBP7.5□□□□□ -1.21
LMNB1-205ENST00000472034 ZNF772Q68DY9 489 aaPredicted RBP7.5□□□□□ -1.21
LMNB1-205ENST00000472034 COLQQ9Y215 455 aaPredicted RBP7.5□□□□□ -1.21
LMNB1-205ENST00000472034 CDK12Q9NYV4 1490 aaPredicted RBP7.49□□□□□ -1.21
LMNB1-205ENST00000472034 KIF14Q15058 1648 aa7.49□□□□□ -1.21
LMNB1-205ENST00000472034 JCADQ9P266 1359 aa7.49□□□□□ -1.21
LMNB1-205ENST00000472034 ARHGAP5Q13017 1502 aa7.49□□□□□ -1.21
LMNB1-205ENST00000472034 NUTM2BA6NNL0 878 aaPredicted RBP7.49□□□□□ -1.21
LMNB1-205ENST00000472034 NUTM2EB1AL46 878 aaPredicted RBP7.49□□□□□ -1.21
LMNB1-205ENST00000472034 RANGAP1P46060 587 aaPredicted RBP7.49□□□□□ -1.21
LMNB1-205ENST00000472034 HAP1P54257 671 aaPredicted RBP7.49□□□□□ -1.21
LMNB1-205ENST00000472034 NUTM2DQ5VT03 806 aaPredicted RBP7.49□□□□□ -1.21
LMNB1-205ENST00000472034 NUTM2AQ8IVF1 878 aaPredicted RBP7.49□□□□□ -1.21
LMNB1-205ENST00000472034 PDCD7Q8N8D1 485 aaKnown RBP7.49□□□□□ -1.21
LMNB1-205ENST00000472034 MS4A4AQ96JQ5 239 aa7.49□□□□□ -1.21
LMNB1-205ENST00000472034 PHLPP1O60346 1717 aa7.48□□□□□ -1.21
LMNB1-205ENST00000472034 GGT6Q6P531 493 aa7.48□□□□□ -1.21
LMNB1-205ENST00000472034 BOLA1Q9Y3E2 137 aa7.48□□□□□ -1.21
LMNB1-205ENST00000472034 DEPDC5O75140 1603 aa7.48□□□□□ -1.21
LMNB1-205ENST00000472034 TNRQ92752 1358 aa7.47□□□□□ -1.21
LMNB1-205ENST00000472034 DPY19L2Q6NUT2 758 aa7.46□□□□□ -1.22
LMNB1-205ENST00000472034 C3orf67Q6ZVT6 689 aa7.46□□□□□ -1.22
LMNB1-205ENST00000472034 ZC3H13Q5T200 1668 aaKnown RBP7.46□□□□□ -1.22
LMNB1-205ENST00000472034 COL16A1Q07092 1604 aaPredicted RBP7.45□□□□□ -1.22
LMNB1-205ENST00000472034 PPP1R37O75864 691 aa7.45□□□□□ -1.22
LMNB1-205ENST00000472034 MAMSTRQ6ZN01 415 aa7.45□□□□□ -1.22
LMNB1-205ENST00000472034 LRP5O75197 1615 aa7.45□□□□□ -1.22
LMNB1-205ENST00000472034 POTEFA5A3E0 1075 aa7.44□□□□□ -1.22
LMNB1-205ENST00000472034 YY1P25490 414 aa7.44□□□□□ -1.22
LMNB1-205ENST00000472034 MICALL2Q8IY33 904 aa7.44□□□□□ -1.22
LMNB1-205ENST00000472034 AFF2P51816 1311 aa7.44□□□□□ -1.22
LMNB1-205ENST00000472034 TMEM94Q12767 1356 aa7.44□□□□□ -1.22
LMNB1-205ENST00000472034 PRXQ9BXM0 1461 aa7.43□□□□□ -1.22
LMNB1-205ENST00000472034 MAP3K1Q13233 1512 aa7.43□□□□□ -1.22
LMNB1-205ENST00000472034 PLXNC1O60486 1568 aa7.43□□□□□ -1.22
LMNB1-205ENST00000472034 UGGT1Q9NYU2 1555 aa7.43□□□□□ -1.22
LMNB1-205ENST00000472034 THEMISQ8N1K5 641 aaPredicted RBP7.43□□□□□ -1.22
LMNB1-205ENST00000472034 SCUBE2Q9NQ36 999 aa7.43□□□□□ -1.22
LMNB1-205ENST00000472034 CDC42BPBQ9Y5S2 1711 aa7.43□□□□□ -1.22
LMNB1-205ENST00000472034 SAMD9LQ8IVG5 1584 aa7.42□□□□□ -1.22
LMNB1-205ENST00000472034 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.42□□□□□ -1.22
LMNB1-205ENST00000472034 SPATA31A6Q5VVP1 1343 aa7.42□□□□□ -1.22
LMNB1-205ENST00000472034 ATAD2Q6PL18 1390 aa7.42□□□□□ -1.22
LMNB1-205ENST00000472034 FAM135AQ9P2D6 1515 aa7.42□□□□□ -1.22
LMNB1-205ENST00000472034 TMEM121BQ9BXQ6 578 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms