RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 UPF1Q92900 1129 aaKnown RBP eCLIP29.96■■■□□ 2.39
SORT1-203ENST00000471996 SPATA31A6Q5VVP1 1343 aa29.96■■■□□ 2.39
SORT1-203ENST00000471996 COL16A1Q07092 1604 aaPredicted RBP29.94■■■□□ 2.38
SORT1-203ENST00000471996 ZNF772Q68DY9 489 aaPredicted RBP29.94■■■□□ 2.38
SORT1-203ENST00000471996 FGD6Q6ZV73 1430 aa29.94■■■□□ 2.38
SORT1-203ENST00000471996 PTPN23Q9H3S7 1636 aa29.93■■■□□ 2.38
SORT1-203ENST00000471996 ANKRD30AQ9BXX3 1397 aa29.93■■■□□ 2.38
SORT1-203ENST00000471996 PLEKHG1Q9ULL1 1385 aa29.93■■■□□ 2.38
SORT1-203ENST00000471996 LRP6O75581 1613 aa29.93■■■□□ 2.38
SORT1-203ENST00000471996 CHIC2Q9UKJ5 165 aa29.92■■■□□ 2.38
SORT1-203ENST00000471996 ZFYVE9O95405 1425 aa29.91■■■□□ 2.38
SORT1-203ENST00000471996 NCOA3Q9Y6Q9 1424 aa29.91■■■□□ 2.38
SORT1-203ENST00000471996 MEX3CQ5U5Q3 659 aaKnown RBP29.91■■■□□ 2.38
SORT1-203ENST00000471996 HDGFP51858 240 aaKnown RBP29.89■■■□□ 2.38
SORT1-203ENST00000471996 TRIM52Q96A61 297 aa29.89■■■□□ 2.38
SORT1-203ENST00000471996 PPP1R15AO75807 674 aaPredicted RBP29.88■■■□□ 2.37
SORT1-203ENST00000471996 TBX22Q9Y458 520 aa29.88■■■□□ 2.37
SORT1-203ENST00000471996 CHD2O14647 1828 aaKnown RBP29.86■■■□□ 2.37
SORT1-203ENST00000471996 RIMS2Q9UQ26 1411 aa29.86■■■□□ 2.37
SORT1-203ENST00000471996 C14orf37Q86TY3 774 aa29.85■■■□□ 2.37
SORT1-203ENST00000471996 CADPS2Q86UW7 1296 aa29.84■■■□□ 2.37
SORT1-203ENST00000471996 RPRD2Q5VT52 1461 aaKnown RBP29.84■■■□□ 2.37
SORT1-203ENST00000471996 C19orf44Q9H6X5 657 aa29.82■■■□□ 2.36
SORT1-203ENST00000471996 RXRBP28702 533 aa29.81■■■□□ 2.36
SORT1-203ENST00000471996 AHDC1Q5TGY3 1603 aaPredicted RBP29.81■■■□□ 2.36
SORT1-203ENST00000471996 LOC105371045A0A1W2PR82 267 aa29.8■■■□□ 2.36
SORT1-203ENST00000471996 ATF3P18847 181 aa29.79■■■□□ 2.36
SORT1-203ENST00000471996 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.78■■■□□ 2.36
SORT1-203ENST00000471996 SHPRHQ149N8 1683 aa29.76■■■□□ 2.36
SORT1-203ENST00000471996 TMEM131LA2VDJ0 1609 aa29.75■■■□□ 2.35
SORT1-203ENST00000471996 ADAMTS13Q76LX8 1427 aa29.75■■■□□ 2.35
SORT1-203ENST00000471996 APLP2Q06481 763 aa29.74■■■□□ 2.35
SORT1-203ENST00000471996 PIK3R4Q99570 1358 aa29.74■■■□□ 2.35
SORT1-203ENST00000471996 ADGRL2O95490 1459 aa29.74■■■□□ 2.35
SORT1-203ENST00000471996 CDK12Q9NYV4 1490 aaPredicted RBP29.74■■■□□ 2.35
SORT1-203ENST00000471996 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.73■■■□□ 2.35
SORT1-203ENST00000471996 BRINP3Q76B58 766 aa29.72■■■□□ 2.35
SORT1-203ENST00000471996 NUTM2BA6NNL0 878 aaPredicted RBP29.71■■■□□ 2.35
SORT1-203ENST00000471996 NUTM2EB1AL46 878 aaPredicted RBP29.71■■■□□ 2.35
SORT1-203ENST00000471996 NUTM2AQ8IVF1 878 aaPredicted RBP29.71■■■□□ 2.35
SORT1-203ENST00000471996 GCC2Q8IWJ2 1684 aa29.71■■■□□ 2.35
SORT1-203ENST00000471996 MYO5BQ9ULV0 1848 aa29.71■■■□□ 2.35
SORT1-203ENST00000471996 ANKRD50Q9ULJ7 1429 aa29.71■■■□□ 2.35
SORT1-203ENST00000471996 CHGAP10645 457 aaKnown RBP29.7■■■□□ 2.35
SORT1-203ENST00000471996 NUTM2DQ5VT03 806 aaPredicted RBP29.69■■■□□ 2.34
SORT1-203ENST00000471996 DIP2AQ14689 1571 aa29.69■■■□□ 2.34
SORT1-203ENST00000471996 AFF2P51816 1311 aa29.67■■■□□ 2.34
SORT1-203ENST00000471996 AMOTL2Q9Y2J4 779 aa29.66■■■□□ 2.34
SORT1-203ENST00000471996 SETD5Q9C0A6 1442 aa29.62■■■□□ 2.33
SORT1-203ENST00000471996 DCCP43146 1447 aa29.62■■■□□ 2.33
SORT1-203ENST00000471996 PTPRUQ92729 1446 aa29.62■■■□□ 2.33
SORT1-203ENST00000471996 TRPM2O94759 1503 aa29.6■■■□□ 2.33
SORT1-203ENST00000471996 ASXL1Q8IXJ9 1541 aa29.59■■■□□ 2.33
SORT1-203ENST00000471996 FAM50AQ14320 339 aaKnown RBP29.57■■■□□ 2.32
SORT1-203ENST00000471996 LRRC59Q96AG4 307 aaKnown RBP29.57■■■□□ 2.32
SORT1-203ENST00000471996 RBM6P78332 1123 aaKnown RBP29.56■■■□□ 2.32
SORT1-203ENST00000471996 QTRT2Q9H974 415 aaKnown RBP29.56■■■□□ 2.32
SORT1-203ENST00000471996 RGS12O14924 1447 aa29.55■■■□□ 2.32
SORT1-203ENST00000471996 MST1RQ04912 1400 aa29.54■■■□□ 2.32
SORT1-203ENST00000471996 C8orf37Q96NL8 207 aa29.54■■■□□ 2.32
SORT1-203ENST00000471996 UNC13BO14795 1591 aa29.51■■■□□ 2.31
SORT1-203ENST00000471996 SRCAPQ6ZRS2 3230 aa29.5■■■□□ 2.31
SORT1-203ENST00000471996 E9PCH4 1651 aa29.5■■■□□ 2.31
SORT1-203ENST00000471996 PNPLA6Q8IY17 1366 aa29.49■■■□□ 2.31
SORT1-203ENST00000471996 NHSL1Q5SYE7 1610 aa29.49■■■□□ 2.31
SORT1-203ENST00000471996 DDX17Q92841 729 aaKnown RBP29.47■■■□□ 2.31
SORT1-203ENST00000471996 XRN1Q8IZH2 1706 aaKnown RBP29.45■■■□□ 2.31
SORT1-203ENST00000471996 NGLY1Q96IV0 654 aa29.43■■■□□ 2.3
SORT1-203ENST00000471996 SETBP1Q9Y6X0 1596 aa29.42■■■□□ 2.3
SORT1-203ENST00000471996 NRXN3Q9Y4C0 1643 aa29.42■■■□□ 2.3
SORT1-203ENST00000471996 METP08581 1390 aa29.41■■■□□ 2.3
SORT1-203ENST00000471996 ADGRL3Q9HAR2 1447 aa29.4■■■□□ 2.3
SORT1-203ENST00000471996 IQGAP3Q86VI3 1631 aa29.4■■■□□ 2.3
SORT1-203ENST00000471996 ADAMTS2O95450 1211 aa29.39■■■□□ 2.3
SORT1-203ENST00000471996 NUP155O75694 1391 aa29.39■■■□□ 2.29
SORT1-203ENST00000471996 ATAD2Q6PL18 1390 aa29.39■■■□□ 2.29
SORT1-203ENST00000471996 ROCK1Q13464 1354 aa29.36■■■□□ 2.29
SORT1-203ENST00000471996 ZNF326Q5BKZ1 582 aaKnown RBP29.34■■■□□ 2.29
SORT1-203ENST00000471996 USP21Q9UK80 565 aa29.33■■■□□ 2.29
SORT1-203ENST00000471996 C1orf167Q5SNV9 1468 aa29.32■■■□□ 2.28
SORT1-203ENST00000471996 FOXD1Q16676 465 aa29.32■■■□□ 2.28
SORT1-203ENST00000471996 TRPC5Q9UL62 973 aaPredicted RBP29.32■■■□□ 2.28
SORT1-203ENST00000471996 ZRANB1Q9UGI0 708 aa29.3■■■□□ 2.28
SORT1-203ENST00000471996 SOS2Q07890 1332 aaPredicted RBP29.29■■■□□ 2.28
SORT1-203ENST00000471996 FNBP4Q8N3X1 1017 aaPredicted RBP29.29■■■□□ 2.28
SORT1-203ENST00000471996 NALCNQ8IZF0 1738 aa29.27■■■□□ 2.28
SORT1-203ENST00000471996 PTCH1Q13635 1447 aa29.26■■■□□ 2.27
SORT1-203ENST00000471996 LAMC1P11047 1609 aa29.25■■■□□ 2.27
SORT1-203ENST00000471996 ORAI2Q96SN7 254 aa29.25■■■□□ 2.27
SORT1-203ENST00000471996 ATRNO75882 1429 aa29.23■■■□□ 2.27
SORT1-203ENST00000471996 CCDC125Q86Z20 511 aa29.2■■■□□ 2.26
SORT1-203ENST00000471996 NEXMIFQ5QGS0 1516 aa29.2■■■□□ 2.26
SORT1-203ENST00000471996 SPHKAPQ2M3C7 1700 aa29.18■■■□□ 2.26
SORT1-203ENST00000471996 ROBO2Q9HCK4 1378 aa29.16■■■□□ 2.26
SORT1-203ENST00000471996 EP400Q96L91 3159 aa29.13■■■□□ 2.25
SORT1-203ENST00000471996 COL22A1Q8NFW1 1626 aaPredicted RBP29.12■■■□□ 2.25
SORT1-203ENST00000471996 MYOM2P54296 1465 aa29.12■■■□□ 2.25
SORT1-203ENST00000471996 BCL9LQ86UU0 1499 aa29.12■■■□□ 2.25
SORT1-203ENST00000471996 ITGAEP38570 1179 aa29.12■■■□□ 2.25
SORT1-203ENST00000471996 PRAG1Q86YV5 1406 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms