RNA–Protein interactions for RNA: ENST00000471960.5

ARPC1A-204, Transcript of actin related protein 2/3 complex subunit 1A, humanhuman

TSL 3

Gene ARPC1A, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1A-204ENST00000471960 NUTM2DQ5VT03 806 aaPredicted RBP21.01■□□□□ 0.95
ARPC1A-204ENST00000471960 SLC26A8Q96RN1 970 aa21.01■□□□□ 0.95
ARPC1A-204ENST00000471960 RIMS2Q9UQ26 1411 aa21.01■□□□□ 0.95
ARPC1A-204ENST00000471960 ALKQ9UM73 1620 aa21■□□□□ 0.95
ARPC1A-204ENST00000471960 XIRP1Q702N8 1843 aaKnown RBP20.97■□□□□ 0.95
ARPC1A-204ENST00000471960 TRIM52Q96A61 297 aa20.97■□□□□ 0.95
ARPC1A-204ENST00000471960 CLTCL1P53675 1640 aa20.96■□□□□ 0.95
ARPC1A-204ENST00000471960 PLEKHG1Q9ULL1 1385 aa20.94■□□□□ 0.94
ARPC1A-204ENST00000471960 PIP4K2BP78356 416 aa20.93■□□□□ 0.94
ARPC1A-204ENST00000471960 BCANQ96GW7 911 aa20.92■□□□□ 0.94
ARPC1A-204ENST00000471960 PPP1R15AO75807 674 aaPredicted RBP20.91■□□□□ 0.94
ARPC1A-204ENST00000471960 TRPM2O94759 1503 aa20.91■□□□□ 0.94
ARPC1A-204ENST00000471960 RBM33Q96EV2 1170 aaKnown RBP20.91■□□□□ 0.94
ARPC1A-204ENST00000471960 SCAF1Q9H7N4 1312 aaKnown RBP20.9■□□□□ 0.94
ARPC1A-204ENST00000471960 ADAMTS13Q76LX8 1427 aa20.89■□□□□ 0.94
ARPC1A-204ENST00000471960 DISP3Q9P2K9 1392 aa20.89■□□□□ 0.93
ARPC1A-204ENST00000471960 KCNA6P17658 529 aa20.89■□□□□ 0.93
ARPC1A-204ENST00000471960 SLC4A1APQ9BWU0 796 aaKnown RBP20.88■□□□□ 0.93
ARPC1A-204ENST00000471960 NWD1Q149M9 1564 aa20.88■□□□□ 0.93
ARPC1A-204ENST00000471960 TOM1O60784 492 aa20.87■□□□□ 0.93
ARPC1A-204ENST00000471960 CHD2O14647 1828 aaKnown RBP20.87■□□□□ 0.93
ARPC1A-204ENST00000471960 TMEM94Q12767 1356 aa20.86■□□□□ 0.93
ARPC1A-204ENST00000471960 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.86■□□□□ 0.93
ARPC1A-204ENST00000471960 HSPA1LP34931 641 aa20.85■□□□□ 0.93
ARPC1A-204ENST00000471960 NRXN3Q9Y4C0 1643 aa20.85■□□□□ 0.93
ARPC1A-204ENST00000471960 HDGFP51858 240 aaKnown RBP20.84■□□□□ 0.93
ARPC1A-204ENST00000471960 PROSER2Q86WR7 435 aaPredicted RBP20.84■□□□□ 0.93
ARPC1A-204ENST00000471960 KIF1BO60333 1816 aa20.83■□□□□ 0.93
ARPC1A-204ENST00000471960 ZNF326Q5BKZ1 582 aaKnown RBP20.83■□□□□ 0.93
ARPC1A-204ENST00000471960 NEXMIFQ5QGS0 1516 aa20.83■□□□□ 0.92
ARPC1A-204ENST00000471960 TBX22Q9Y458 520 aa20.82■□□□□ 0.92
ARPC1A-204ENST00000471960 NKTRP30414 1462 aaKnown RBP20.81■□□□□ 0.92
ARPC1A-204ENST00000471960 PTPRUQ92729 1446 aa20.8■□□□□ 0.92
ARPC1A-204ENST00000471960 SETD5Q9C0A6 1442 aa20.8■□□□□ 0.92
ARPC1A-204ENST00000471960 MPHOSPH9Q99550 1183 aa20.79■□□□□ 0.92
ARPC1A-204ENST00000471960 DIP2AQ14689 1571 aa20.79■□□□□ 0.92
ARPC1A-204ENST00000471960 ILDR2Q71H61 639 aa20.78■□□□□ 0.92
ARPC1A-204ENST00000471960 SETBP1Q9Y6X0 1596 aa20.77■□□□□ 0.92
ARPC1A-204ENST00000471960 RAB3GAP2Q9H2M9 1393 aa20.75■□□□□ 0.91
ARPC1A-204ENST00000471960 METP08581 1390 aa20.74■□□□□ 0.91
ARPC1A-204ENST00000471960 AMOTL2Q9Y2J4 779 aa20.72■□□□□ 0.91
ARPC1A-204ENST00000471960 XRN1Q8IZH2 1706 aaKnown RBP20.72■□□□□ 0.91
ARPC1A-204ENST00000471960 PPLO60437 1756 aa20.72■□□□□ 0.91
ARPC1A-204ENST00000471960 PIK3R4Q99570 1358 aa20.71■□□□□ 0.91
ARPC1A-204ENST00000471960 SOCS7O14512 581 aa20.7■□□□□ 0.9
ARPC1A-204ENST00000471960 SETD1AO15047 1707 aaKnown RBP20.69■□□□□ 0.9
ARPC1A-204ENST00000471960 SPATA31E1Q6ZUB1 1445 aa20.69■□□□□ 0.9
ARPC1A-204ENST00000471960 MED1Q15648 1581 aaPredicted RBP20.68■□□□□ 0.9
ARPC1A-204ENST00000471960 MSH6P52701 1360 aa20.68■□□□□ 0.9
ARPC1A-204ENST00000471960 CCDC144AA2RUR9 1427 aa20.68■□□□□ 0.9
ARPC1A-204ENST00000471960 ROBO1Q9Y6N7 1651 aa20.67■□□□□ 0.9
ARPC1A-204ENST00000471960 RGL3Q3MIN7 710 aa20.66■□□□□ 0.9
ARPC1A-204ENST00000471960 FAM135BQ49AJ0 1406 aa20.66■□□□□ 0.9
ARPC1A-204ENST00000471960 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.66■□□□□ 0.9
ARPC1A-204ENST00000471960 RPGRIP1LQ68CZ1 1315 aa20.64■□□□□ 0.89
ARPC1A-204ENST00000471960 ADGRF5Q8IZF2 1346 aa20.64■□□□□ 0.89
ARPC1A-204ENST00000471960 IFT172Q9UG01 1749 aa20.64■□□□□ 0.89
ARPC1A-204ENST00000471960 VGFO15240 615 aaPredicted RBP20.63■□□□□ 0.89
ARPC1A-204ENST00000471960 C14orf37Q86TY3 774 aa20.63■□□□□ 0.89
ARPC1A-204ENST00000471960 SLAIN2Q9P270 581 aa20.63■□□□□ 0.89
ARPC1A-204ENST00000471960 NCOA3Q9Y6Q9 1424 aa20.61■□□□□ 0.89
ARPC1A-204ENST00000471960 C19orf44Q9H6X5 657 aa20.59■□□□□ 0.89
ARPC1A-204ENST00000471960 ROBO2Q9HCK4 1378 aa20.58■□□□□ 0.88
ARPC1A-204ENST00000471960 NALCNQ8IZF0 1738 aa20.57■□□□□ 0.88
ARPC1A-204ENST00000471960 ANKRD30BQ9BXX2 1392 aa20.56■□□□□ 0.88
ARPC1A-204ENST00000471960 ACIN1Q9UKV3 1341 aaKnown RBP20.54■□□□□ 0.88
ARPC1A-204ENST00000471960 ASXL1Q8IXJ9 1541 aa20.54■□□□□ 0.88
ARPC1A-204ENST00000471960 PHLPP1O60346 1717 aa20.54■□□□□ 0.88
ARPC1A-204ENST00000471960 ATF3P18847 181 aa20.54■□□□□ 0.88
ARPC1A-204ENST00000471960 ADGRL3Q9HAR2 1447 aa20.53■□□□□ 0.88
ARPC1A-204ENST00000471960 CADPS2Q86UW7 1296 aa20.52■□□□□ 0.88
ARPC1A-204ENST00000471960 PIK3C2GO75747 1445 aa20.52■□□□□ 0.87
ARPC1A-204ENST00000471960 PTCH1Q13635 1447 aa20.52■□□□□ 0.87
ARPC1A-204ENST00000471960 HRCP23327 699 aa20.51■□□□□ 0.87
ARPC1A-204ENST00000471960 TMEM132EQ6IEE7 984 aa20.51■□□□□ 0.87
ARPC1A-204ENST00000471960 MST1RQ04912 1400 aa20.51■□□□□ 0.87
ARPC1A-204ENST00000471960 COL16A1Q07092 1604 aaPredicted RBP20.5■□□□□ 0.87
ARPC1A-204ENST00000471960 DCCP43146 1447 aa20.5■□□□□ 0.87
ARPC1A-204ENST00000471960 BRINP3Q76B58 766 aa20.49■□□□□ 0.87
ARPC1A-204ENST00000471960 STK26Q9P289 416 aa20.49■□□□□ 0.87
ARPC1A-204ENST00000471960 PRAG1Q86YV5 1406 aa20.49■□□□□ 0.87
ARPC1A-204ENST00000471960 NRXN1Q9ULB1 1477 aa20.48■□□□□ 0.87
ARPC1A-204ENST00000471960 AHDC1Q5TGY3 1603 aaPredicted RBP20.45■□□□□ 0.87
ARPC1A-204ENST00000471960 MYOM2P54296 1465 aa20.45■□□□□ 0.86
ARPC1A-204ENST00000471960 CFAP70Q5T0N1 1121 aa20.45■□□□□ 0.86
ARPC1A-204ENST00000471960 DDX17Q92841 729 aaKnown RBP20.45■□□□□ 0.86
ARPC1A-204ENST00000471960 LRPPRCP42704 1394 aaKnown RBP20.45■□□□□ 0.86
ARPC1A-204ENST00000471960 PLEKHH1Q9ULM0 1364 aa20.45■□□□□ 0.86
ARPC1A-204ENST00000471960 WAPLQ7Z5K2 1190 aa20.44■□□□□ 0.86
ARPC1A-204ENST00000471960 C14orf93Q9H972 538 aaKnown RBP20.43■□□□□ 0.86
ARPC1A-204ENST00000471960 RGS17Q9UGC6 210 aaPredicted RBP20.42■□□□□ 0.86
ARPC1A-204ENST00000471960 TECPR2O15040 1411 aa20.42■□□□□ 0.86
ARPC1A-204ENST00000471960 KNDC1Q76NI1 1749 aa20.41■□□□□ 0.86
ARPC1A-204ENST00000471960 DHX57Q6P158 1386 aaKnown RBP20.41■□□□□ 0.86
ARPC1A-204ENST00000471960 YTHDC2Q9H6S0 1430 aaKnown RBP20.41■□□□□ 0.86
ARPC1A-204ENST00000471960 C1orf167Q5SNV9 1468 aa20.41■□□□□ 0.86
ARPC1A-204ENST00000471960 NHSL1Q5SYE7 1610 aa20.4■□□□□ 0.86
ARPC1A-204ENST00000471960 ABCC11Q96J66 1382 aa20.4■□□□□ 0.86
ARPC1A-204ENST00000471960 KDM2AQ9Y2K7 1162 aa20.4■□□□□ 0.86
ARPC1A-204ENST00000471960 JCADQ9P266 1359 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms