RNA–Protein interactions for RNA: ENST00000470650.1

CCDC93-206, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-206ENST00000470650 PLA2G2EQ9NZK7 142 aa11.8□□□□□ -0.52
CCDC93-206ENST00000470650 TSR3Q9UJK0 312 aaKnown RBP11.8□□□□□ -0.52
CCDC93-206ENST00000470650 SCRIBQ14160 1630 aa11.79□□□□□ -0.52
CCDC93-206ENST00000470650 RCCD1A6NED2 376 aa11.79□□□□□ -0.52
CCDC93-206ENST00000470650 HDGFP51858 240 aaKnown RBP11.78□□□□□ -0.52
CCDC93-206ENST00000470650 PPP4CP60510 307 aa11.78□□□□□ -0.52
CCDC93-206ENST00000470650 PXYLP1Q8TE99 480 aa11.77□□□□□ -0.53
CCDC93-206ENST00000470650 DNAJB2P25686 324 aa11.75□□□□□ -0.53
CCDC93-206ENST00000470650 METTL3Q86U44 580 aaKnown RBP11.75□□□□□ -0.53
CCDC93-206ENST00000470650 PHOX2BQ99453 314 aa11.74□□□□□ -0.53
CCDC93-206ENST00000470650 OATP04181 439 aa11.73□□□□□ -0.53
CCDC93-206ENST00000470650 TMEM134Q9H6X4 195 aa11.73□□□□□ -0.53
CCDC93-206ENST00000470650 DCAF1Q9Y4B6 1507 aa11.73□□□□□ -0.53
CCDC93-206ENST00000470650 APLP1P51693 650 aa11.7□□□□□ -0.54
CCDC93-206ENST00000470650 SLF2Q8IX21 1173 aa11.7□□□□□ -0.54
CCDC93-206ENST00000470650 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.68□□□□□ -0.54
CCDC93-206ENST00000470650 ZCCHC6Q5VYS8 1495 aaKnown RBP11.68□□□□□ -0.54
CCDC93-206ENST00000470650 IRF6O14896 467 aa11.67□□□□□ -0.54
CCDC93-206ENST00000470650 MAP2K5Q13163 448 aa11.67□□□□□ -0.54
CCDC93-206ENST00000470650 ZC3H15Q8WU90 426 aaKnown RBP11.67□□□□□ -0.54
CCDC93-206ENST00000470650 SLC10A3P09131 477 aa11.66□□□□□ -0.54
CCDC93-206ENST00000470650 NYAP1Q6ZVC0 841 aa11.66□□□□□ -0.54
CCDC93-206ENST00000470650 CCDC102AQ96A19 550 aa11.64□□□□□ -0.55
CCDC93-206ENST00000470650 KRI1Q8N9T8 703 aaKnown RBP11.63□□□□□ -0.55
CCDC93-206ENST00000470650 ERCC6Q03468 1493 aa11.63□□□□□ -0.55
CCDC93-206ENST00000470650 MINK1Q8N4C8 1332 aaPredicted RBP11.62□□□□□ -0.55
CCDC93-206ENST00000470650 SLC4A3P48751 1232 aa11.62□□□□□ -0.55
CCDC93-206ENST00000470650 DDX11L8A8MPP1 907 aa11.61□□□□□ -0.55
CCDC93-206ENST00000470650 ZMYND10O75800 440 aa11.61□□□□□ -0.55
CCDC93-206ENST00000470650 ITGBL1O95965 494 aaPredicted RBP11.61□□□□□ -0.55
CCDC93-206ENST00000470650 COPS2P61201 443 aa11.61□□□□□ -0.55
CCDC93-206ENST00000470650 TJAP1Q5JTD0 557 aa11.61□□□□□ -0.55
CCDC93-206ENST00000470650 ZNF516Q92618 1163 aa11.61□□□□□ -0.55
CCDC93-206ENST00000470650 MTRQ99707 1265 aa11.61□□□□□ -0.55
CCDC93-206ENST00000470650 CFHP08603 1231 aa11.6□□□□□ -0.55
CCDC93-206ENST00000470650 DAXXQ9UER7 740 aaPredicted RBP11.6□□□□□ -0.55
CCDC93-206ENST00000470650 KCNC4Q03721 635 aa11.59□□□□□ -0.55
CCDC93-206ENST00000470650 BARGINQ6ZT62 677 aa11.59□□□□□ -0.55
CCDC93-206ENST00000470650 MDM2Q00987 491 aaPredicted RBP11.58□□□□□ -0.56
CCDC93-206ENST00000470650 RDH13Q8NBN7 331 aa11.58□□□□□ -0.56
CCDC93-206ENST00000470650 BCANQ96GW7 911 aa11.57□□□□□ -0.56
CCDC93-206ENST00000470650 BLOC1S3Q6QNY0 202 aa11.55□□□□□ -0.56
CCDC93-206ENST00000470650 NKX2-3Q8TAU0 364 aa11.55□□□□□ -0.56
CCDC93-206ENST00000470650 IFFO2Q5TF58 517 aa11.54□□□□□ -0.56
CCDC93-206ENST00000470650 NECTIN2Q92692 538 aa11.54□□□□□ -0.56
CCDC93-206ENST00000470650 PCDHB3Q9Y5E6 796 aa11.54□□□□□ -0.56
CCDC93-206ENST00000470650 PUS10Q3MIT2 529 aaKnown RBP11.53□□□□□ -0.56
CCDC93-206ENST00000470650 REPIN1Q9BWE0 567 aaKnown RBP11.53□□□□□ -0.56
CCDC93-206ENST00000470650 IL21Q9HBE4 155 aa11.53□□□□□ -0.56
CCDC93-206ENST00000470650 KMT5BQ4FZB7 885 aa11.52□□□□□ -0.57
CCDC93-206ENST00000470650 A0A0G2JS52 829 aa11.51□□□□□ -0.57
CCDC93-206ENST00000470650 ACTN4O43707 911 aaKnown RBP11.51□□□□□ -0.57
CCDC93-206ENST00000470650 RSPH4AQ5TD94 716 aa11.49□□□□□ -0.57
CCDC93-206ENST00000470650 PRR14Q9BWN1 585 aa11.49□□□□□ -0.57
CCDC93-206ENST00000470650 TLL1O43897 1013 aa11.48□□□□□ -0.57
CCDC93-206ENST00000470650 ZPR1O75312 459 aa11.48□□□□□ -0.57
CCDC93-206ENST00000470650 THOC2Q8NI27 1593 aaKnown RBP11.47□□□□□ -0.57
CCDC93-206ENST00000470650 GCGRP47871 477 aa11.47□□□□□ -0.57
CCDC93-206ENST00000470650 FUT2Q10981 343 aa11.47□□□□□ -0.57
CCDC93-206ENST00000470650 SLC24A3Q9HC58 644 aa11.47□□□□□ -0.57
CCDC93-206ENST00000470650 SULF1Q8IWU6 871 aa11.46□□□□□ -0.57
CCDC93-206ENST00000470650 NCAPD3P42695 1498 aa11.45□□□□□ -0.58
CCDC93-206ENST00000470650 CD46P15529 392 aa11.45□□□□□ -0.58
CCDC93-206ENST00000470650 TMUB1Q9BVT8 246 aa11.45□□□□□ -0.58
CCDC93-206ENST00000470650 GPCPD1Q9NPB8 672 aa11.45□□□□□ -0.58
CCDC93-206ENST00000470650 NESP48681 1621 aa11.45□□□□□ -0.58
CCDC93-206ENST00000470650 PPP1R18Q6NYC8 613 aa11.44□□□□□ -0.58
CCDC93-206ENST00000470650 TRIM66O15016 1216 aa11.43□□□□□ -0.58
CCDC93-206ENST00000470650 CLCN1P35523 988 aa11.43□□□□□ -0.58
CCDC93-206ENST00000470650 FAM217BQ9NTX9 383 aaPredicted RBP11.43□□□□□ -0.58
CCDC93-206ENST00000470650 TTLL12Q14166 644 aaPredicted RBP11.42□□□□□ -0.58
CCDC93-206ENST00000470650 SCUBE3Q8IX30 993 aa11.42□□□□□ -0.58
CCDC93-206ENST00000470650 HLA-CQ95604 372 aa11.41□□□□□ -0.58
CCDC93-206ENST00000470650 AK7Q96M32 723 aa11.41□□□□□ -0.58
CCDC93-206ENST00000470650 SSTR3P32745 418 aaPredicted RBP11.4□□□□□ -0.58
CCDC93-206ENST00000470650 MORN1Q5T089 497 aa11.4□□□□□ -0.58
CCDC93-206ENST00000470650 ATP6V1AP38606 617 aa11.39□□□□□ -0.59
CCDC93-206ENST00000470650 AMHR2Q16671 573 aa11.39□□□□□ -0.59
CCDC93-206ENST00000470650 NR1I2O75469 434 aa11.38□□□□□ -0.59
CCDC93-206ENST00000470650 GIGYF2Q6Y7W6 1299 aaKnown RBP11.38□□□□□ -0.59
CCDC93-206ENST00000470650 SLC27A5Q9Y2P5 690 aa11.38□□□□□ -0.59
CCDC93-206ENST00000470650 PPEF1O14829 653 aaPredicted RBP11.37□□□□□ -0.59
CCDC93-206ENST00000470650 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.37□□□□□ -0.59
CCDC93-206ENST00000470650 KDM4AO75164 1064 aa11.36□□□□□ -0.59
CCDC93-206ENST00000470650 PARP9Q8IXQ6 854 aa11.36□□□□□ -0.59
CCDC93-206ENST00000470650 S1PR4O95977 384 aa11.35□□□□□ -0.59
CCDC93-206ENST00000470650 GUCA2AQ02747 115 aa11.35□□□□□ -0.59
CCDC93-206ENST00000470650 KIF21AQ7Z4S6 1674 aa11.34□□□□□ -0.59
CCDC93-206ENST00000470650 ATAD2BQ9ULI0 1458 aa11.33□□□□□ -0.6
CCDC93-206ENST00000470650 MS4A1P11836 297 aa11.33□□□□□ -0.6
CCDC93-206ENST00000470650 PDE4DQ08499 809 aa11.33□□□□□ -0.6
CCDC93-206ENST00000470650 SPSB2Q99619 263 aa11.33□□□□□ -0.6
CCDC93-206ENST00000470650 HMGXB3Q12766 1538 aa11.33□□□□□ -0.6
CCDC93-206ENST00000470650 ADH1BP00325 375 aa11.32□□□□□ -0.6
CCDC93-206ENST00000470650 RNF19BQ6ZMZ0 732 aa11.32□□□□□ -0.6
CCDC93-206ENST00000470650 THAP11Q96EK4 314 aa11.32□□□□□ -0.6
CCDC93-206ENST00000470650 RNF223E7ERA6 249 aa11.31□□□□□ -0.6
CCDC93-206ENST00000470650 SMARCA2P51531 1590 aa11.3□□□□□ -0.6
CCDC93-206ENST00000470650 HOXA2O43364 376 aa11.3□□□□□ -0.6
CCDC93-206ENST00000470650 NUTM1Q86Y26 1132 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms