RNA–Protein interactions for RNA: ENST00000468958.1

ABCF1-204, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-204ENST00000468958 RIMS2Q9UQ26 1411 aa18.97■□□□□ 0.63
ABCF1-204ENST00000468958 CHD2O14647 1828 aaKnown RBP18.96■□□□□ 0.63
ABCF1-204ENST00000468958 KIF1BO60333 1816 aa18.95■□□□□ 0.62
ABCF1-204ENST00000468958 TRPM2O94759 1503 aa18.95■□□□□ 0.62
ABCF1-204ENST00000468958 NWD1Q149M9 1564 aa18.94■□□□□ 0.62
ABCF1-204ENST00000468958 NRXN3Q9Y4C0 1643 aa18.93■□□□□ 0.62
ABCF1-204ENST00000468958 UBAP1LF5GYI3 381 aa18.93■□□□□ 0.62
ABCF1-204ENST00000468958 SLC26A8Q96RN1 970 aa18.93■□□□□ 0.62
ABCF1-204ENST00000468958 CHGAP10645 457 aaKnown RBP18.92■□□□□ 0.62
ABCF1-204ENST00000468958 PLEKHG1Q9ULL1 1385 aa18.91■□□□□ 0.62
ABCF1-204ENST00000468958 NUTM2DQ5VT03 806 aaPredicted RBP18.9■□□□□ 0.62
ABCF1-204ENST00000468958 ADAMTS13Q76LX8 1427 aa18.89■□□□□ 0.61
ABCF1-204ENST00000468958 NEXMIFQ5QGS0 1516 aa18.89■□□□□ 0.61
ABCF1-204ENST00000468958 TRIM52Q96A61 297 aa18.88■□□□□ 0.61
ABCF1-204ENST00000468958 DIP2AQ14689 1571 aa18.85■□□□□ 0.61
ABCF1-204ENST00000468958 PPLO60437 1756 aa18.84■□□□□ 0.61
ABCF1-204ENST00000468958 FOXD1Q16676 465 aa18.84■□□□□ 0.61
ABCF1-204ENST00000468958 SETD1AO15047 1707 aaKnown RBP18.83■□□□□ 0.61
ABCF1-204ENST00000468958 KCNA6P17658 529 aa18.83■□□□□ 0.6
ABCF1-204ENST00000468958 RBM33Q96EV2 1170 aaKnown RBP18.83■□□□□ 0.6
ABCF1-204ENST00000468958 SLC4A1APQ9BWU0 796 aaKnown RBP18.83■□□□□ 0.6
ABCF1-204ENST00000468958 SETBP1Q9Y6X0 1596 aa18.83■□□□□ 0.6
ABCF1-204ENST00000468958 NKTRP30414 1462 aaKnown RBP18.83■□□□□ 0.6
ABCF1-204ENST00000468958 PPP1R15AO75807 674 aaPredicted RBP18.82■□□□□ 0.6
ABCF1-204ENST00000468958 PIP4K2BP78356 416 aa18.82■□□□□ 0.6
ABCF1-204ENST00000468958 BCANQ96GW7 911 aa18.81■□□□□ 0.6
ABCF1-204ENST00000468958 TMEM94Q12767 1356 aa18.81■□□□□ 0.6
ABCF1-204ENST00000468958 XRN1Q8IZH2 1706 aaKnown RBP18.8■□□□□ 0.6
ABCF1-204ENST00000468958 IFT172Q9UG01 1749 aa18.8■□□□□ 0.6
ABCF1-204ENST00000468958 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.8■□□□□ 0.6
ABCF1-204ENST00000468958 PTPRUQ92729 1446 aa18.8■□□□□ 0.6
ABCF1-204ENST00000468958 SETD5Q9C0A6 1442 aa18.8■□□□□ 0.6
ABCF1-204ENST00000468958 TOM1O60784 492 aa18.79■□□□□ 0.6
ABCF1-204ENST00000468958 HDGFP51858 240 aaKnown RBP18.78■□□□□ 0.6
ABCF1-204ENST00000468958 TBX22Q9Y458 520 aa18.78■□□□□ 0.6
ABCF1-204ENST00000468958 SCAF1Q9H7N4 1312 aaKnown RBP18.77■□□□□ 0.6
ABCF1-204ENST00000468958 HSPA1LP34931 641 aa18.76■□□□□ 0.59
ABCF1-204ENST00000468958 ZNF326Q5BKZ1 582 aaKnown RBP18.76■□□□□ 0.59
ABCF1-204ENST00000468958 MPHOSPH9Q99550 1183 aa18.76■□□□□ 0.59
ABCF1-204ENST00000468958 RAB3GAP2Q9H2M9 1393 aa18.76■□□□□ 0.59
ABCF1-204ENST00000468958 PROSER2Q86WR7 435 aaPredicted RBP18.75■□□□□ 0.59
ABCF1-204ENST00000468958 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.74■□□□□ 0.59
ABCF1-204ENST00000468958 ROBO1Q9Y6N7 1651 aa18.74■□□□□ 0.59
ABCF1-204ENST00000468958 METP08581 1390 aa18.72■□□□□ 0.59
ABCF1-204ENST00000468958 PIK3R4Q99570 1358 aa18.71■□□□□ 0.59
ABCF1-204ENST00000468958 SPATA31E1Q6ZUB1 1445 aa18.71■□□□□ 0.59
ABCF1-204ENST00000468958 ACIN1Q9UKV3 1341 aaKnown RBP18.69■□□□□ 0.58
ABCF1-204ENST00000468958 NALCNQ8IZF0 1738 aa18.69■□□□□ 0.58
ABCF1-204ENST00000468958 CCDC144AA2RUR9 1427 aa18.68■□□□□ 0.58
ABCF1-204ENST00000468958 AMOTL2Q9Y2J4 779 aa18.68■□□□□ 0.58
ABCF1-204ENST00000468958 MED1Q15648 1581 aaPredicted RBP18.66■□□□□ 0.58
ABCF1-204ENST00000468958 MSH6P52701 1360 aa18.65■□□□□ 0.58
ABCF1-204ENST00000468958 FAM135BQ49AJ0 1406 aa18.65■□□□□ 0.58
ABCF1-204ENST00000468958 DISP3Q9P2K9 1392 aa18.64■□□□□ 0.57
ABCF1-204ENST00000468958 NCOA3Q9Y6Q9 1424 aa18.64■□□□□ 0.57
ABCF1-204ENST00000468958 RPGRIP1LQ68CZ1 1315 aa18.63■□□□□ 0.57
ABCF1-204ENST00000468958 ASXL1Q8IXJ9 1541 aa18.63■□□□□ 0.57
ABCF1-204ENST00000468958 ADGRF5Q8IZF2 1346 aa18.62■□□□□ 0.57
ABCF1-204ENST00000468958 PHLPP1O60346 1717 aa18.62■□□□□ 0.57
ABCF1-204ENST00000468958 RGL3Q3MIN7 710 aa18.61■□□□□ 0.57
ABCF1-204ENST00000468958 VGFO15240 615 aaPredicted RBP18.6■□□□□ 0.57
ABCF1-204ENST00000468958 ILDR2Q71H61 639 aa18.59■□□□□ 0.57
ABCF1-204ENST00000468958 SLAIN2Q9P270 581 aa18.58■□□□□ 0.56
ABCF1-204ENST00000468958 COL16A1Q07092 1604 aaPredicted RBP18.58■□□□□ 0.56
ABCF1-204ENST00000468958 PRAG1Q86YV5 1406 aa18.57■□□□□ 0.56
ABCF1-204ENST00000468958 KNDC1Q76NI1 1749 aa18.57■□□□□ 0.56
ABCF1-204ENST00000468958 ANKRD30BQ9BXX2 1392 aa18.57■□□□□ 0.56
ABCF1-204ENST00000468958 PIK3C2GO75747 1445 aa18.57■□□□□ 0.56
ABCF1-204ENST00000468958 ROBO2Q9HCK4 1378 aa18.56■□□□□ 0.56
ABCF1-204ENST00000468958 C19orf44Q9H6X5 657 aa18.56■□□□□ 0.56
ABCF1-204ENST00000468958 PTCH1Q13635 1447 aa18.56■□□□□ 0.56
ABCF1-204ENST00000468958 NRXN1Q9ULB1 1477 aa18.55■□□□□ 0.56
ABCF1-204ENST00000468958 C14orf37Q86TY3 774 aa18.55■□□□□ 0.56
ABCF1-204ENST00000468958 ADGRL3Q9HAR2 1447 aa18.55■□□□□ 0.56
ABCF1-204ENST00000468958 NHSL1Q5SYE7 1610 aa18.54■□□□□ 0.56
ABCF1-204ENST00000468958 MST1RQ04912 1400 aa18.54■□□□□ 0.56
ABCF1-204ENST00000468958 MYOM2P54296 1465 aa18.53■□□□□ 0.56
ABCF1-204ENST00000468958 AHDC1Q5TGY3 1603 aaPredicted RBP18.53■□□□□ 0.56
ABCF1-204ENST00000468958 HRCP23327 699 aa18.53■□□□□ 0.56
ABCF1-204ENST00000468958 DCCP43146 1447 aa18.53■□□□□ 0.56
ABCF1-204ENST00000468958 LAMC1P11047 1609 aa18.52■□□□□ 0.55
ABCF1-204ENST00000468958 TRIM26Q12899 539 aaPredicted RBP18.51■□□□□ 0.55
ABCF1-204ENST00000468958 CADPS2Q86UW7 1296 aa18.51■□□□□ 0.55
ABCF1-204ENST00000468958 ATF3P18847 181 aa18.49■□□□□ 0.55
ABCF1-204ENST00000468958 TMEM132EQ6IEE7 984 aa18.48■□□□□ 0.55
ABCF1-204ENST00000468958 TECPR2O15040 1411 aa18.48■□□□□ 0.55
ABCF1-204ENST00000468958 SHPRHQ149N8 1683 aa18.47■□□□□ 0.55
ABCF1-204ENST00000468958 BRINP3Q76B58 766 aa18.47■□□□□ 0.55
ABCF1-204ENST00000468958 LRPPRCP42704 1394 aaKnown RBP18.45■□□□□ 0.54
ABCF1-204ENST00000468958 PLEKHH1Q9ULM0 1364 aa18.45■□□□□ 0.54
ABCF1-204ENST00000468958 YTHDC2Q9H6S0 1430 aaKnown RBP18.45■□□□□ 0.54
ABCF1-204ENST00000468958 CDC42BPGQ6DT37 1551 aa18.45■□□□□ 0.54
ABCF1-204ENST00000468958 RGPD8O14715 1765 aaPredicted RBP18.45■□□□□ 0.54
ABCF1-204ENST00000468958 DHX57Q6P158 1386 aaKnown RBP18.44■□□□□ 0.54
ABCF1-204ENST00000468958 ADGRB1O14514 1584 aa18.44■□□□□ 0.54
ABCF1-204ENST00000468958 CFAP70Q5T0N1 1121 aa18.44■□□□□ 0.54
ABCF1-204ENST00000468958 C14orf93Q9H972 538 aaKnown RBP18.44■□□□□ 0.54
ABCF1-204ENST00000468958 C1orf167Q5SNV9 1468 aa18.44■□□□□ 0.54
ABCF1-204ENST00000468958 FMN2Q9NZ56 1722 aa18.43■□□□□ 0.54
ABCF1-204ENST00000468958 STK26Q9P289 416 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms