RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 ADGRB3O60242 1522 aa29.33■■■□□ 2.29
LINC00888-201ENST00000468380 FGD6Q6ZV73 1430 aa29.32■■■□□ 2.28
LINC00888-201ENST00000468380 JCADQ9P266 1359 aa29.3■■■□□ 2.28
LINC00888-201ENST00000468380 PHLPP1O60346 1717 aa29.28■■■□□ 2.28
LINC00888-201ENST00000468380 ZFYVE9O95405 1425 aa29.28■■■□□ 2.28
LINC00888-201ENST00000468380 SETD1AO15047 1707 aaKnown RBP29.26■■■□□ 2.27
LINC00888-201ENST00000468380 PLEKHG1Q9ULL1 1385 aa29.26■■■□□ 2.27
LINC00888-201ENST00000468380 APLP2Q06481 763 aa29.24■■■□□ 2.27
LINC00888-201ENST00000468380 CHD2O14647 1828 aaKnown RBP29.24■■■□□ 2.27
LINC00888-201ENST00000468380 RIMS2Q9UQ26 1411 aa29.22■■■□□ 2.27
LINC00888-201ENST00000468380 TBX22Q9Y458 520 aa29.22■■■□□ 2.27
LINC00888-201ENST00000468380 COL16A1Q07092 1604 aaPredicted RBP29.2■■■□□ 2.27
LINC00888-201ENST00000468380 PPP1R15AO75807 674 aaPredicted RBP29.2■■■□□ 2.26
LINC00888-201ENST00000468380 MYO5BQ9ULV0 1848 aa29.2■■■□□ 2.26
LINC00888-201ENST00000468380 LRP6O75581 1613 aa29.19■■■□□ 2.26
LINC00888-201ENST00000468380 ADGRL2O95490 1459 aa29.18■■■□□ 2.26
LINC00888-201ENST00000468380 RPRD2Q5VT52 1461 aaKnown RBP29.18■■■□□ 2.26
LINC00888-201ENST00000468380 HDGFP51858 240 aaKnown RBP29.18■■■□□ 2.26
LINC00888-201ENST00000468380 NUTM2DQ5VT03 806 aaPredicted RBP29.16■■■□□ 2.26
LINC00888-201ENST00000468380 NCOA3Q9Y6Q9 1424 aa29.16■■■□□ 2.26
LINC00888-201ENST00000468380 TMEM131LA2VDJ0 1609 aa29.16■■■□□ 2.26
LINC00888-201ENST00000468380 ANKRD50Q9ULJ7 1429 aa29.15■■■□□ 2.26
LINC00888-201ENST00000468380 SPATA31A6Q5VVP1 1343 aa29.15■■■□□ 2.26
LINC00888-201ENST00000468380 C14orf37Q86TY3 774 aa29.14■■■□□ 2.26
LINC00888-201ENST00000468380 UPF1Q92900 1129 aaKnown RBP eCLIP29.14■■■□□ 2.262e-7■■■■□ 22.2
LINC00888-201ENST00000468380 ADAMTS13Q76LX8 1427 aa29.13■■■□□ 2.25
LINC00888-201ENST00000468380 GCC2Q8IWJ2 1684 aa29.12■■■□□ 2.25
LINC00888-201ENST00000468380 CHGAP10645 457 aaKnown RBP29.12■■■□□ 2.25
LINC00888-201ENST00000468380 C19orf44Q9H6X5 657 aa29.12■■■□□ 2.25
LINC00888-201ENST00000468380 FAM50AQ14320 339 aaKnown RBP29.11■■■□□ 2.25
LINC00888-201ENST00000468380 TRIM52Q96A61 297 aa29.11■■■□□ 2.25
LINC00888-201ENST00000468380 MEX3CQ5U5Q3 659 aaKnown RBP29.1■■■□□ 2.25
LINC00888-201ENST00000468380 ZNF772Q68DY9 489 aaPredicted RBP29.1■■■□□ 2.25
LINC00888-201ENST00000468380 CADPS2Q86UW7 1296 aa29.1■■■□□ 2.25
LINC00888-201ENST00000468380 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.1■■■□□ 2.25
LINC00888-201ENST00000468380 ATF3P18847 181 aa29.08■■■□□ 2.25
LINC00888-201ENST00000468380 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.08■■■□□ 2.25
LINC00888-201ENST00000468380 AHDC1Q5TGY3 1603 aaPredicted RBP29.05■■■□□ 2.24
LINC00888-201ENST00000468380 BRINP3Q76B58 766 aa29.04■■■□□ 2.24
LINC00888-201ENST00000468380 AMOTL2Q9Y2J4 779 aa29.04■■■□□ 2.24
LINC00888-201ENST00000468380 PIK3R4Q99570 1358 aa29.03■■■□□ 2.24
LINC00888-201ENST00000468380 PTPRUQ92729 1446 aa29.02■■■□□ 2.24
LINC00888-201ENST00000468380 NUTM2BA6NNL0 878 aaPredicted RBP29.01■■■□□ 2.23
LINC00888-201ENST00000468380 NUTM2EB1AL46 878 aaPredicted RBP29.01■■■□□ 2.23
LINC00888-201ENST00000468380 RXRBP28702 533 aa29.01■■■□□ 2.23
LINC00888-201ENST00000468380 NUTM2AQ8IVF1 878 aaPredicted RBP29.01■■■□□ 2.23
LINC00888-201ENST00000468380 SHPRHQ149N8 1683 aa29■■■□□ 2.23
LINC00888-201ENST00000468380 E9PCH4 1651 aa28.97■■■□□ 2.23
LINC00888-201ENST00000468380 DIP2AQ14689 1571 aa28.96■■■□□ 2.23
LINC00888-201ENST00000468380 UNC13BO14795 1591 aa28.95■■■□□ 2.22
LINC00888-201ENST00000468380 AFF2P51816 1311 aa28.93■■■□□ 2.22
LINC00888-201ENST00000468380 TRPM2O94759 1503 aa28.91■■■□□ 2.22
LINC00888-201ENST00000468380 SETD5Q9C0A6 1442 aa28.88■■■□□ 2.21
LINC00888-201ENST00000468380 CDK12Q9NYV4 1490 aaPredicted RBP28.88■■■□□ 2.21
LINC00888-201ENST00000468380 DCCP43146 1447 aa28.87■■■□□ 2.21
LINC00888-201ENST00000468380 MST1RQ04912 1400 aa28.87■■■□□ 2.21
LINC00888-201ENST00000468380 DDX17Q92841 729 aaKnown RBP28.87■■■□□ 2.21
LINC00888-201ENST00000468380 ASXL1Q8IXJ9 1541 aa28.87■■■□□ 2.21
LINC00888-201ENST00000468380 NUP155O75694 1391 aa28.86■■■□□ 2.21
LINC00888-201ENST00000468380 IQGAP3Q86VI3 1631 aa28.84■■■□□ 2.21
LINC00888-201ENST00000468380 LRRC59Q96AG4 307 aaKnown RBP28.84■■■□□ 2.21
LINC00888-201ENST00000468380 METP08581 1390 aa28.84■■■□□ 2.21
LINC00888-201ENST00000468380 NRXN3Q9Y4C0 1643 aa28.83■■■□□ 2.21
LINC00888-201ENST00000468380 QTRT2Q9H974 415 aaKnown RBP28.83■■■□□ 2.21
LINC00888-201ENST00000468380 ROCK1Q13464 1354 aa28.83■■■□□ 2.21
LINC00888-201ENST00000468380 XRN1Q8IZH2 1706 aaKnown RBP28.82■■■□□ 2.2
LINC00888-201ENST00000468380 C8orf37Q96NL8 207 aa28.81■■■□□ 2.2
LINC00888-201ENST00000468380 NHSL1Q5SYE7 1610 aa28.8■■■□□ 2.2
LINC00888-201ENST00000468380 RBM6P78332 1123 aaKnown RBP28.78■■■□□ 2.2
LINC00888-201ENST00000468380 SETBP1Q9Y6X0 1596 aa28.78■■■□□ 2.2
LINC00888-201ENST00000468380 RGS12O14924 1447 aa28.77■■■□□ 2.2
LINC00888-201ENST00000468380 PNPLA6Q8IY17 1366 aa28.77■■■□□ 2.2
LINC00888-201ENST00000468380 ZNF326Q5BKZ1 582 aaKnown RBP28.75■■■□□ 2.19
LINC00888-201ENST00000468380 ADGRL3Q9HAR2 1447 aa28.72■■■□□ 2.19
LINC00888-201ENST00000468380 ITGAEP38570 1179 aa28.72■■■□□ 2.19
LINC00888-201ENST00000468380 ADAMTS2O95450 1211 aa28.71■■■□□ 2.19
LINC00888-201ENST00000468380 SRCAPQ6ZRS2 3230 aa28.7■■■□□ 2.19
LINC00888-201ENST00000468380 NGLY1Q96IV0 654 aa28.7■■■□□ 2.18
LINC00888-201ENST00000468380 C1orf167Q5SNV9 1468 aa28.66■■■□□ 2.18
LINC00888-201ENST00000468380 ORAI2Q96SN7 254 aa28.65■■■□□ 2.18
LINC00888-201ENST00000468380 NALCNQ8IZF0 1738 aa28.65■■■□□ 2.18
LINC00888-201ENST00000468380 SPHKAPQ2M3C7 1700 aa28.64■■■□□ 2.18
LINC00888-201ENST00000468380 SOS2Q07890 1332 aaPredicted RBP28.63■■■□□ 2.17
LINC00888-201ENST00000468380 NEXMIFQ5QGS0 1516 aa28.61■■■□□ 2.17
LINC00888-201ENST00000468380 USP21Q9UK80 565 aa28.6■■■□□ 2.17
LINC00888-201ENST00000468380 ROBO2Q9HCK4 1378 aa28.58■■■□□ 2.17
LINC00888-201ENST00000468380 FNBP4Q8N3X1 1017 aaPredicted RBP28.57■■■□□ 2.16
LINC00888-201ENST00000468380 CLTCL1P53675 1640 aa28.57■■■□□ 2.16
LINC00888-201ENST00000468380 LAMC1P11047 1609 aa28.56■■■□□ 2.16
LINC00888-201ENST00000468380 TRPC5Q9UL62 973 aaPredicted RBP28.55■■■□□ 2.16
LINC00888-201ENST00000468380 ATAD2Q6PL18 1390 aa28.54■■■□□ 2.16
LINC00888-201ENST00000468380 PPARGC1BQ86YN6 1023 aaKnown RBP28.53■■■□□ 2.16
LINC00888-201ENST00000468380 PTCH1Q13635 1447 aa28.52■■■□□ 2.16
LINC00888-201ENST00000468380 ATRNO75882 1429 aa28.5■■■□□ 2.15
LINC00888-201ENST00000468380 VGFO15240 615 aaPredicted RBP28.49■■■□□ 2.15
LINC00888-201ENST00000468380 KIF1BO60333 1816 aa28.44■■■□□ 2.14
LINC00888-201ENST00000468380 ZRANB1Q9UGI0 708 aa28.44■■■□□ 2.14
LINC00888-201ENST00000468380 BCL9LQ86UU0 1499 aa28.44■■■□□ 2.14
LINC00888-201ENST00000468380 EP400Q96L91 3159 aa28.43■■■□□ 2.14
LINC00888-201ENST00000468380 COL22A1Q8NFW1 1626 aaPredicted RBP28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms