RNA–Protein interactions for RNA: ENST00000468166.5

SND1-206, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-206ENST00000468166 NEXMIFQ5QGS0 1516 aa11.26□□□□□ -0.61
SND1-206ENST00000468166 HSPA5P11021 654 aaKnown RBP11.26□□□□□ -0.61
SND1-206ENST00000468166 FBXO31Q5XUX0 539 aaPredicted RBP11.26□□□□□ -0.61
SND1-206ENST00000468166 HIRIP3Q9BW71 556 aaPredicted RBP11.26□□□□□ -0.61
SND1-206ENST00000468166 USP47Q96K76 1375 aa11.26□□□□□ -0.61
SND1-206ENST00000468166 RIMS1Q86UR5 1692 aaKnown RBP11.25□□□□□ -0.61
SND1-206ENST00000468166 CARD11Q9BXL7 1154 aa11.25□□□□□ -0.61
SND1-206ENST00000468166 NRXN1Q9ULB1 1477 aa11.25□□□□□ -0.61
SND1-206ENST00000468166 KDM5AP29375 1690 aaKnown RBP11.24□□□□□ -0.61
SND1-206ENST00000468166 IQGAP1P46940 1657 aa11.24□□□□□ -0.61
SND1-206ENST00000468166 IDI1Q13907 227 aa11.24□□□□□ -0.61
SND1-206ENST00000468166 RPGRIP1LQ68CZ1 1315 aa11.24□□□□□ -0.61
SND1-206ENST00000468166 GPRASP1Q5JY77 1395 aa11.24□□□□□ -0.61
SND1-206ENST00000468166 ADAMTSL3P82987 1691 aa11.22□□□□□ -0.61
SND1-206ENST00000468166 TNRQ92752 1358 aa11.22□□□□□ -0.61
SND1-206ENST00000468166 UBR1Q8IWV7 1749 aa11.21□□□□□ -0.61
SND1-206ENST00000468166 PIK3C2GO75747 1445 aa11.21□□□□□ -0.61
SND1-206ENST00000468166 STAG3Q9UJ98 1225 aa11.21□□□□□ -0.61
SND1-206ENST00000468166 SETBP1Q9Y6X0 1596 aa11.2□□□□□ -0.62
SND1-206ENST00000468166 A2ML1A8K2U0 1454 aa11.2□□□□□ -0.62
SND1-206ENST00000468166 ADGRF5Q8IZF2 1346 aa11.2□□□□□ -0.62
SND1-206ENST00000468166 NBPF1Q3BBV0 1214 aa11.2□□□□□ -0.62
SND1-206ENST00000468166 MYO3AQ8NEV4 1616 aa11.2□□□□□ -0.62
SND1-206ENST00000468166 NLRP1Q9C000 1473 aa11.19□□□□□ -0.62
SND1-206ENST00000468166 ZFYVE9O95405 1425 aa11.19□□□□□ -0.62
SND1-206ENST00000468166 KCNA4P22459 653 aa11.19□□□□□ -0.62
SND1-206ENST00000468166 VGFO15240 615 aaPredicted RBP11.18□□□□□ -0.62
SND1-206ENST00000468166 SCAF11Q99590 1463 aaKnown RBP11.18□□□□□ -0.62
SND1-206ENST00000468166 EIF3AQ14152 1382 aaKnown RBP11.16□□□□□ -0.62
SND1-206ENST00000468166 CCDC7Q96M83 1385 aa11.16□□□□□ -0.62
SND1-206ENST00000468166 RIMS2Q9UQ26 1411 aa11.16□□□□□ -0.62
SND1-206ENST00000468166 ADGRB1O14514 1584 aa11.16□□□□□ -0.62
SND1-206ENST00000468166 WASHC2AQ641Q2 1341 aa11.15□□□□□ -0.62
SND1-206ENST00000468166 ST20-MTHFSA0A0A6YYL1 179 aa11.15□□□□□ -0.62
SND1-206ENST00000468166 CEBPAP49715 358 aaPredicted RBP11.15□□□□□ -0.62
SND1-206ENST00000468166 DDX10Q13206 875 aaKnown RBP11.15□□□□□ -0.62
SND1-206ENST00000468166 CFAP70Q5T0N1 1121 aa11.15□□□□□ -0.62
SND1-206ENST00000468166 NUTM2DQ5VT03 806 aaPredicted RBP11.15□□□□□ -0.62
SND1-206ENST00000468166 ZNF142P52746 1687 aaPredicted RBP11.14□□□□□ -0.63
SND1-206ENST00000468166 KIF7Q2M1P5 1343 aa11.13□□□□□ -0.63
SND1-206ENST00000468166 SETD1AO15047 1707 aaKnown RBP11.13□□□□□ -0.63
SND1-206ENST00000468166 ARHGEF28Q8N1W1 1705 aaKnown RBP11.13□□□□□ -0.63
SND1-206ENST00000468166 CEP170BQ9Y4F5 1589 aaPredicted RBP11.13□□□□□ -0.63
SND1-206ENST00000468166 C14orf93Q9H972 538 aaKnown RBP11.13□□□□□ -0.63
SND1-206ENST00000468166 QRICH2Q9H0J4 1663 aa11.13□□□□□ -0.63
SND1-206ENST00000468166 C11orf95C9JLR9 678 aaPredicted RBP11.12□□□□□ -0.63
SND1-206ENST00000468166 ASXL1Q8IXJ9 1541 aa11.12□□□□□ -0.63
SND1-206ENST00000468166 ALKQ9UM73 1620 aa11.12□□□□□ -0.63
SND1-206ENST00000468166 NRXN3Q9Y4C0 1643 aa11.12□□□□□ -0.63
SND1-206ENST00000468166 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.11□□□□□ -0.63
SND1-206ENST00000468166 TMEM2Q9UHN6 1383 aa11.11□□□□□ -0.63
SND1-206ENST00000468166 HDGFP51858 240 aaKnown RBP11.1□□□□□ -0.63
SND1-206ENST00000468166 SLIT1O75093 1534 aa11.09□□□□□ -0.63
SND1-206ENST00000468166 MIER1Q8N108 512 aa11.09□□□□□ -0.63
SND1-206ENST00000468166 POLR3GLQ9BT43 218 aa11.09□□□□□ -0.63
SND1-206ENST00000468166 SETD1BQ9UPS6 1966 aaKnown RBP11.08□□□□□ -0.64
SND1-206ENST00000468166 PTPRMP28827 1452 aa11.08□□□□□ -0.64
SND1-206ENST00000468166 ARHGAP23Q9P227 1491 aa11.08□□□□□ -0.64
SND1-206ENST00000468166 TMF1P82094 1093 aa11.08□□□□□ -0.64
SND1-206ENST00000468166 PPP4R3CPQ6ZMV5 832 aa11.08□□□□□ -0.64
SND1-206ENST00000468166 TESK2Q96S53 571 aa11.08□□□□□ -0.64
SND1-206ENST00000468166 DISP3Q9P2K9 1392 aa11.07□□□□□ -0.64
SND1-206ENST00000468166 TMEM132EQ6IEE7 984 aa11.07□□□□□ -0.64
SND1-206ENST00000468166 KNDC1Q76NI1 1749 aa11.06□□□□□ -0.64
SND1-206ENST00000468166 SBNO2Q9Y2G9 1366 aa11.06□□□□□ -0.64
SND1-206ENST00000468166 TRAK1Q9UPV9 953 aa11.06□□□□□ -0.64
SND1-206ENST00000468166 YTHDC2Q9H6S0 1430 aaKnown RBP11.06□□□□□ -0.64
SND1-206ENST00000468166 CENPJQ9HC77 1338 aaPredicted RBP11.06□□□□□ -0.64
SND1-206ENST00000468166 PLEKHG1Q9ULL1 1385 aa11.05□□□□□ -0.64
SND1-206ENST00000468166 MYOM1P52179 1685 aa11.05□□□□□ -0.64
SND1-206ENST00000468166 SLC24A1O60721 1099 aa11.05□□□□□ -0.64
SND1-206ENST00000468166 THEMISQ8N1K5 641 aaPredicted RBP11.05□□□□□ -0.64
SND1-206ENST00000468166 EID1Q9Y6B2 187 aa11.05□□□□□ -0.64
SND1-206ENST00000468166 DLC1Q96QB1 1528 aa11.04□□□□□ -0.64
SND1-206ENST00000468166 DIP2AQ14689 1571 aa11.04□□□□□ -0.64
SND1-206ENST00000468166 ANP32CO43423 234 aa11.04□□□□□ -0.64
SND1-206ENST00000468166 CDCA8Q53HL2 280 aa11.04□□□□□ -0.64
SND1-206ENST00000468166 BCANQ96GW7 911 aa11.04□□□□□ -0.64
SND1-206ENST00000468166 TXNDC2Q86VQ3 553 aa11.03□□□□□ -0.64
SND1-206ENST00000468166 STK26Q9P289 416 aa11.02□□□□□ -0.65
SND1-206ENST00000468166 CPS1P31327 1500 aa11.02□□□□□ -0.65
SND1-206ENST00000468166 LRPPRCP42704 1394 aaKnown RBP11.02□□□□□ -0.65
SND1-206ENST00000468166 ADAMTS13Q76LX8 1427 aa11.01□□□□□ -0.65
SND1-206ENST00000468166 LTKP29376 864 aa11.01□□□□□ -0.65
SND1-206ENST00000468166 METP08581 1390 aa11.01□□□□□ -0.65
SND1-206ENST00000468166 TULP4Q9NRJ4 1543 aa11□□□□□ -0.65
SND1-206ENST00000468166 MED14O60244 1454 aa11□□□□□ -0.65
SND1-206ENST00000468166 POGKQ9P215 609 aa10.99□□□□□ -0.65
SND1-206ENST00000468166 ABCC11Q96J66 1382 aa10.99□□□□□ -0.65
SND1-206ENST00000468166 TECPR2O15040 1411 aa10.99□□□□□ -0.65
SND1-206ENST00000468166 PRAM1Q96QH2 718 aa10.98□□□□□ -0.65
SND1-206ENST00000468166 SAFB2Q14151 953 aaKnown RBP eCLIP10.97□□□□□ -0.65
SND1-206ENST00000468166 EVC2Q86UK5 1308 aa10.97□□□□□ -0.65
SND1-206ENST00000468166 FAM135BQ49AJ0 1406 aa10.97□□□□□ -0.65
SND1-206ENST00000468166 XRN1Q8IZH2 1706 aaKnown RBP10.97□□□□□ -0.65
SND1-206ENST00000468166 NCBP3Q53F19 620 aaKnown RBP10.96□□□□□ -0.65
SND1-206ENST00000468166 ANKLE2Q86XL3 938 aa10.96□□□□□ -0.65
SND1-206ENST00000468166 CCER2I3L3R5 266 aa10.95□□□□□ -0.66
SND1-206ENST00000468166 SLC26A8Q96RN1 970 aa10.95□□□□□ -0.66
SND1-206ENST00000468166 ADGRB2O60241 1585 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms