RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 TET3O43151 1660 aa28.83■■■□□ 2.21
USP11-205ENST00000467378 MSH6P52701 1360 aa28.82■■■□□ 2.2
USP11-205ENST00000467378 JCADQ9P266 1359 aa28.82■■■□□ 2.2
USP11-205ENST00000467378 GCC2Q8IWJ2 1684 aa28.81■■■□□ 2.2
USP11-205ENST00000467378 NKTRP30414 1462 aaKnown RBP28.8■■■□□ 2.2
USP11-205ENST00000467378 NWD1Q149M9 1564 aa28.79■■■□□ 2.2
USP11-205ENST00000467378 NAIPQ13075 1403 aa28.78■■■□□ 2.2
USP11-205ENST00000467378 SLAIN2Q9P270 581 aa28.78■■■□□ 2.2
USP11-205ENST00000467378 IDI1Q13907 227 aa28.77■■■□□ 2.2
USP11-205ENST00000467378 BCANQ96GW7 911 aa28.77■■■□□ 2.2
USP11-205ENST00000467378 HFM1A2PYH4 1435 aa28.76■■■□□ 2.19
USP11-205ENST00000467378 KANK1Q14678 1352 aa28.75■■■□□ 2.19
USP11-205ENST00000467378 COL16A1Q07092 1604 aaPredicted RBP28.74■■■□□ 2.19
USP11-205ENST00000467378 UPF1Q92900 1129 aaKnown RBP eCLIP28.74■■■□□ 2.19
USP11-205ENST00000467378 CHD2O14647 1828 aaKnown RBP28.73■■■□□ 2.19
USP11-205ENST00000467378 MEX3CQ5U5Q3 659 aaKnown RBP28.72■■■□□ 2.19
USP11-205ENST00000467378 TRIM52Q96A61 297 aa28.72■■■□□ 2.19
USP11-205ENST00000467378 UNC13BO14795 1591 aa28.71■■■□□ 2.19
USP11-205ENST00000467378 ADGRB3O60242 1522 aa28.7■■■□□ 2.19
USP11-205ENST00000467378 LRP6O75581 1613 aa28.69■■■□□ 2.18
USP11-205ENST00000467378 ZNF772Q68DY9 489 aaPredicted RBP28.68■■■□□ 2.18
USP11-205ENST00000467378 MYO5BQ9ULV0 1848 aa28.67■■■□□ 2.18
USP11-205ENST00000467378 SPATA31A6Q5VVP1 1343 aa28.66■■■□□ 2.18
USP11-205ENST00000467378 LMTK2Q8IWU2 1503 aa28.64■■■□□ 2.18
USP11-205ENST00000467378 SHPRHQ149N8 1683 aa28.63■■■□□ 2.17
USP11-205ENST00000467378 NOS1P29475 1434 aa28.6■■■□□ 2.17
USP11-205ENST00000467378 C14orf37Q86TY3 774 aa28.6■■■□□ 2.17
USP11-205ENST00000467378 IQGAP3Q86VI3 1631 aa28.6■■■□□ 2.17
USP11-205ENST00000467378 SETD5Q9C0A6 1442 aa28.59■■■□□ 2.17
USP11-205ENST00000467378 PPP1R15AO75807 674 aaPredicted RBP28.57■■■□□ 2.16
USP11-205ENST00000467378 RXRBP28702 533 aa28.57■■■□□ 2.16
USP11-205ENST00000467378 SLC52A1Q9NWF4 448 aa28.57■■■□□ 2.16
USP11-205ENST00000467378 AHDC1Q5TGY3 1603 aaPredicted RBP28.57■■■□□ 2.16
USP11-205ENST00000467378 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.57■■■□□ 2.16
USP11-205ENST00000467378 NUP155O75694 1391 aa28.56■■■□□ 2.16
USP11-205ENST00000467378 PLEKHG1Q9ULL1 1385 aa28.56■■■□□ 2.16
USP11-205ENST00000467378 TRIM26Q12899 539 aaPredicted RBP28.54■■■□□ 2.16
USP11-205ENST00000467378 ZFYVE9O95405 1425 aa28.52■■■□□ 2.16
USP11-205ENST00000467378 NCOA3Q9Y6Q9 1424 aa28.52■■■□□ 2.16
USP11-205ENST00000467378 RIMS2Q9UQ26 1411 aa28.52■■■□□ 2.16
USP11-205ENST00000467378 NUTM2BA6NNL0 878 aaPredicted RBP28.51■■■□□ 2.15
USP11-205ENST00000467378 NUTM2EB1AL46 878 aaPredicted RBP28.51■■■□□ 2.15
USP11-205ENST00000467378 HDGFP51858 240 aaKnown RBP28.51■■■□□ 2.15
USP11-205ENST00000467378 NUTM2AQ8IVF1 878 aaPredicted RBP28.51■■■□□ 2.15
USP11-205ENST00000467378 ATF3P18847 181 aa28.5■■■□□ 2.15
USP11-205ENST00000467378 CADPS2Q86UW7 1296 aa28.5■■■□□ 2.15
USP11-205ENST00000467378 RAB3GAP2Q9H2M9 1393 aa28.49■■■□□ 2.15
USP11-205ENST00000467378 CDK12Q9NYV4 1490 aaPredicted RBP28.48■■■□□ 2.15
USP11-205ENST00000467378 E9PCH4 1651 aa28.48■■■□□ 2.15
USP11-205ENST00000467378 TBX22Q9Y458 520 aa28.47■■■□□ 2.15
USP11-205ENST00000467378 TMEM131LA2VDJ0 1609 aa28.47■■■□□ 2.15
USP11-205ENST00000467378 C19orf44Q9H6X5 657 aa28.46■■■□□ 2.15
USP11-205ENST00000467378 DIP2AQ14689 1571 aa28.45■■■□□ 2.15
USP11-205ENST00000467378 RPRD2Q5VT52 1461 aaKnown RBP28.44■■■□□ 2.14
USP11-205ENST00000467378 AFF2P51816 1311 aa28.43■■■□□ 2.14
USP11-205ENST00000467378 ACIN1Q9UKV3 1341 aaKnown RBP28.43■■■□□ 2.14
USP11-205ENST00000467378 HRCP23327 699 aa28.42■■■□□ 2.14
USP11-205ENST00000467378 CHGAP10645 457 aaKnown RBP28.41■■■□□ 2.14
USP11-205ENST00000467378 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.4■■■□□ 2.14
USP11-205ENST00000467378 NUTM2DQ5VT03 806 aaPredicted RBP28.39■■■□□ 2.14
USP11-205ENST00000467378 BRINP3Q76B58 766 aa28.39■■■□□ 2.14
USP11-205ENST00000467378 ADAMTS13Q76LX8 1427 aa28.38■■■□□ 2.13
USP11-205ENST00000467378 PIK3R4Q99570 1358 aa28.36■■■□□ 2.13
USP11-205ENST00000467378 SLC4A1APQ9BWU0 796 aaKnown RBP28.35■■■□□ 2.13
USP11-205ENST00000467378 RGS12O14924 1447 aa28.35■■■□□ 2.13
USP11-205ENST00000467378 NHSL1Q5SYE7 1610 aa28.34■■■□□ 2.13
USP11-205ENST00000467378 TRPM2O94759 1503 aa28.33■■■□□ 2.13
USP11-205ENST00000467378 ASXL1Q8IXJ9 1541 aa28.33■■■□□ 2.13
USP11-205ENST00000467378 MPHOSPH9Q99550 1183 aa28.32■■■□□ 2.12
USP11-205ENST00000467378 SPHKAPQ2M3C7 1700 aa28.32■■■□□ 2.12
USP11-205ENST00000467378 RBM6P78332 1123 aaKnown RBP28.31■■■□□ 2.12
USP11-205ENST00000467378 C8orf37Q96NL8 207 aa28.31■■■□□ 2.12
USP11-205ENST00000467378 QTRT2Q9H974 415 aaKnown RBP28.31■■■□□ 2.12
USP11-205ENST00000467378 AMOTL2Q9Y2J4 779 aa28.31■■■□□ 2.12
USP11-205ENST00000467378 DCCP43146 1447 aa28.27■■■□□ 2.12
USP11-205ENST00000467378 LRRC59Q96AG4 307 aaKnown RBP28.27■■■□□ 2.12
USP11-205ENST00000467378 PTPRUQ92729 1446 aa28.26■■■□□ 2.12
USP11-205ENST00000467378 MST1RQ04912 1400 aa28.23■■■□□ 2.11
USP11-205ENST00000467378 XRN1Q8IZH2 1706 aaKnown RBP28.22■■■□□ 2.11
USP11-205ENST00000467378 FOXD1Q16676 465 aa28.21■■■□□ 2.11
USP11-205ENST00000467378 PNPLA6Q8IY17 1366 aa28.2■■■□□ 2.1
USP11-205ENST00000467378 DDX17Q92841 729 aaKnown RBP28.19■■■□□ 2.1
USP11-205ENST00000467378 NGLY1Q96IV0 654 aa28.19■■■□□ 2.1
USP11-205ENST00000467378 ATAD2Q6PL18 1390 aa28.19■■■□□ 2.1
USP11-205ENST00000467378 ADAMTS2O95450 1211 aa28.16■■■□□ 2.1
USP11-205ENST00000467378 PCGF6Q9BYE7 350 aa28.16■■■□□ 2.1
USP11-205ENST00000467378 CLTCL1P53675 1640 aa28.16■■■□□ 2.1
USP11-205ENST00000467378 NRXN3Q9Y4C0 1643 aa28.15■■■□□ 2.1
USP11-205ENST00000467378 ZRANB1Q9UGI0 708 aa28.14■■■□□ 2.1
USP11-205ENST00000467378 NALCNQ8IZF0 1738 aa28.12■■■□□ 2.09
USP11-205ENST00000467378 KIF1BO60333 1816 aa28.12■■■□□ 2.09
USP11-205ENST00000467378 SETBP1Q9Y6X0 1596 aa28.1■■■□□ 2.09
USP11-205ENST00000467378 ADGRL3Q9HAR2 1447 aa28.09■■■□□ 2.09
USP11-205ENST00000467378 USP21Q9UK80 565 aa28.08■■■□□ 2.09
USP11-205ENST00000467378 SRCAPQ6ZRS2 3230 aa28.06■■■□□ 2.08
USP11-205ENST00000467378 TRPC5Q9UL62 973 aaPredicted RBP28.06■■■□□ 2.08
USP11-205ENST00000467378 METP08581 1390 aa28.04■■■□□ 2.08
USP11-205ENST00000467378 ANKRD30BQ9BXX2 1392 aa28.04■■■□□ 2.08
USP11-205ENST00000467378 CCDC144AA2RUR9 1427 aa28.02■■■□□ 2.08
USP11-205ENST00000467378 ZNF326Q5BKZ1 582 aaKnown RBP28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms