RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 RPGRIP1LQ68CZ1 1315 aa21.83■■□□□ 1.08
GYPC-205ENST00000464053 PLPPR3Q6T4P5 718 aa21.83■■□□□ 1.08
GYPC-205ENST00000464053 CARD11Q9BXL7 1154 aa21.83■■□□□ 1.08
GYPC-205ENST00000464053 RIMS1Q86UR5 1692 aaKnown RBP21.82■■□□□ 1.08
GYPC-205ENST00000464053 NRXN1Q9ULB1 1477 aa21.81■■□□□ 1.08
GYPC-205ENST00000464053 NUTM2DQ5VT03 806 aaPredicted RBP21.8■■□□□ 1.08
GYPC-205ENST00000464053 USP47Q96K76 1375 aa21.8■■□□□ 1.08
GYPC-205ENST00000464053 GPRASP1Q5JY77 1395 aa21.79■■□□□ 1.08
GYPC-205ENST00000464053 STAG3Q9UJ98 1225 aa21.79■■□□□ 1.08
GYPC-205ENST00000464053 A2ML1A8K2U0 1454 aa21.79■■□□□ 1.08
GYPC-205ENST00000464053 LAMC1P11047 1609 aa21.77■■□□□ 1.08
GYPC-205ENST00000464053 KIAA1210Q9ULL0 1709 aa21.77■■□□□ 1.07
GYPC-205ENST00000464053 DIEXFQ68CQ4 756 aaKnown RBP21.76■■□□□ 1.07
GYPC-205ENST00000464053 CFAP70Q5T0N1 1121 aa21.76■■□□□ 1.07
GYPC-205ENST00000464053 PIK3C2GO75747 1445 aa21.75■■□□□ 1.07
GYPC-205ENST00000464053 VGFO15240 615 aaPredicted RBP21.73■■□□□ 1.07
GYPC-205ENST00000464053 UBR1Q8IWV7 1749 aa21.73■■□□□ 1.07
GYPC-205ENST00000464053 ZFYVE9O95405 1425 aa21.72■■□□□ 1.07
GYPC-205ENST00000464053 NLRP1Q9C000 1473 aa21.72■■□□□ 1.07
GYPC-205ENST00000464053 KDM5AP29375 1690 aaKnown RBP21.71■■□□□ 1.07
GYPC-205ENST00000464053 C11orf95C9JLR9 678 aaPredicted RBP21.7■■□□□ 1.06
GYPC-205ENST00000464053 RIMS2Q9UQ26 1411 aa21.7■■□□□ 1.06
GYPC-205ENST00000464053 ST20-MTHFSA0A0A6YYL1 179 aa21.69■■□□□ 1.06
GYPC-205ENST00000464053 C14orf93Q9H972 538 aaKnown RBP21.69■■□□□ 1.06
GYPC-205ENST00000464053 IQGAP1P46940 1657 aa21.69■■□□□ 1.06
GYPC-205ENST00000464053 SENP3Q9H4L4 574 aaPredicted RBP21.69■■□□□ 1.06
GYPC-205ENST00000464053 MYO3AQ8NEV4 1616 aa21.68■■□□□ 1.06
GYPC-205ENST00000464053 WASHC2AQ641Q2 1341 aa21.66■■□□□ 1.06
GYPC-205ENST00000464053 SETBP1Q9Y6X0 1596 aa21.65■■□□□ 1.06
GYPC-205ENST00000464053 ADGRB1O14514 1584 aa21.64■■□□□ 1.05
GYPC-205ENST00000464053 SCAF11Q99590 1463 aaKnown RBP21.64■■□□□ 1.05
GYPC-205ENST00000464053 DDX10Q13206 875 aaKnown RBP21.64■■□□□ 1.05
GYPC-205ENST00000464053 TMEM2Q9UHN6 1383 aa21.63■■□□□ 1.05
GYPC-205ENST00000464053 POLR1AO95602 1720 aaPredicted RBP21.63■■□□□ 1.05
GYPC-205ENST00000464053 TMEM132EQ6IEE7 984 aa21.62■■□□□ 1.05
GYPC-205ENST00000464053 PTPRMP28827 1452 aa21.62■■□□□ 1.05
GYPC-205ENST00000464053 CCDC7Q96M83 1385 aa21.61■■□□□ 1.05
GYPC-205ENST00000464053 KIF7Q2M1P5 1343 aa21.6■■□□□ 1.05
GYPC-205ENST00000464053 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.59■■□□□ 1.05
GYPC-205ENST00000464053 CEP170BQ9Y4F5 1589 aaPredicted RBP21.59■■□□□ 1.05
GYPC-205ENST00000464053 ASXL1Q8IXJ9 1541 aa21.59■■□□□ 1.05
GYPC-205ENST00000464053 ALKQ9UM73 1620 aa21.59■■□□□ 1.05
GYPC-205ENST00000464053 TESK2Q96S53 571 aa21.58■■□□□ 1.05
GYPC-205ENST00000464053 NRXN3Q9Y4C0 1643 aa21.57■■□□□ 1.04
GYPC-205ENST00000464053 SETD1BQ9UPS6 1966 aaKnown RBP21.57■■□□□ 1.04
GYPC-205ENST00000464053 LTKP29376 864 aa21.57■■□□□ 1.04
GYPC-205ENST00000464053 HDGFP51858 240 aaKnown RBP21.56■■□□□ 1.04
GYPC-205ENST00000464053 SLIT1O75093 1534 aa21.56■■□□□ 1.04
GYPC-205ENST00000464053 ARHGAP23Q9P227 1491 aa21.55■■□□□ 1.04
GYPC-205ENST00000464053 SETD1AO15047 1707 aaKnown RBP21.55■■□□□ 1.04
GYPC-205ENST00000464053 THEMISQ8N1K5 641 aaPredicted RBP21.55■■□□□ 1.04
GYPC-205ENST00000464053 TRAK1Q9UPV9 953 aa21.55■■□□□ 1.04
GYPC-205ENST00000464053 ZNF142P52746 1687 aaPredicted RBP21.54■■□□□ 1.04
GYPC-205ENST00000464053 EIF3AQ14152 1382 aaKnown RBP21.53■■□□□ 1.04
GYPC-205ENST00000464053 TXNDC2Q86VQ3 553 aa21.53■■□□□ 1.04
GYPC-205ENST00000464053 DISP3Q9P2K9 1392 aa21.51■■□□□ 1.03
GYPC-205ENST00000464053 POLR3GLQ9BT43 218 aa21.51■■□□□ 1.03
GYPC-205ENST00000464053 ARHGEF28Q8N1W1 1705 aaKnown RBP21.5■■□□□ 1.03
GYPC-205ENST00000464053 KDM4FA0A1W2PPD8 638 aa21.49■■□□□ 1.03
GYPC-205ENST00000464053 MIER1Q8N108 512 aa21.49■■□□□ 1.03
GYPC-205ENST00000464053 STK26Q9P289 416 aa21.49■■□□□ 1.03
GYPC-205ENST00000464053 EID1Q9Y6B2 187 aa21.49■■□□□ 1.03
GYPC-205ENST00000464053 PLEKHG1Q9ULL1 1385 aa21.49■■□□□ 1.03
GYPC-205ENST00000464053 YTHDC2Q9H6S0 1430 aaKnown RBP21.48■■□□□ 1.03
GYPC-205ENST00000464053 BCANQ96GW7 911 aa21.48■■□□□ 1.03
GYPC-205ENST00000464053 METP08581 1390 aa21.47■■□□□ 1.03
GYPC-205ENST00000464053 ADAMTS13Q76LX8 1427 aa21.47■■□□□ 1.03
GYPC-205ENST00000464053 TMF1P82094 1093 aa21.46■■□□□ 1.03
GYPC-205ENST00000464053 CENPJQ9HC77 1338 aaPredicted RBP21.46■■□□□ 1.03
GYPC-205ENST00000464053 QRICH2Q9H0J4 1663 aa21.46■■□□□ 1.03
GYPC-205ENST00000464053 MED14O60244 1454 aa21.42■■□□□ 1.02
GYPC-205ENST00000464053 LRPPRCP42704 1394 aaKnown RBP21.42■■□□□ 1.02
GYPC-205ENST00000464053 SLC26A8Q96RN1 970 aa21.41■■□□□ 1.02
GYPC-205ENST00000464053 SBNO2Q9Y2G9 1366 aa21.41■■□□□ 1.02
GYPC-205ENST00000464053 SAFB2Q14151 953 aaKnown RBP eCLIP21.39■■□□□ 1.011e-7■■■□□ 18.5
GYPC-205ENST00000464053 PRAM1Q96QH2 718 aa21.39■■□□□ 1.01
GYPC-205ENST00000464053 ANKLE2Q86XL3 938 aa21.38■■□□□ 1.01
GYPC-205ENST00000464053 ABCC11Q96J66 1382 aa21.38■■□□□ 1.01
GYPC-205ENST00000464053 DLC1Q96QB1 1528 aa21.37■■□□□ 1.01
GYPC-205ENST00000464053 KNDC1Q76NI1 1749 aa21.35■■□□□ 1.01
GYPC-205ENST00000464053 SLC24A1O60721 1099 aa21.35■■□□□ 1.01
GYPC-205ENST00000464053 POGKQ9P215 609 aa21.35■■□□□ 1.01
GYPC-205ENST00000464053 TBX22Q9Y458 520 aa21.35■■□□□ 1.01
GYPC-205ENST00000464053 CDCA8Q53HL2 280 aa21.34■■□□□ 1.01
GYPC-205ENST00000464053 WAPLQ7Z5K2 1190 aa21.34■■□□□ 1.01
GYPC-205ENST00000464053 PLEKHH1Q9ULM0 1364 aa21.34■■□□□ 1.01
GYPC-205ENST00000464053 PTPRUQ92729 1446 aa21.33■■□□□ 1.01
GYPC-205ENST00000464053 DIP2AQ14689 1571 aa21.33■■□□□ 1.01
GYPC-205ENST00000464053 TULP4Q9NRJ4 1543 aa21.33■■□□□ 1.01
GYPC-205ENST00000464053 TECPR2O15040 1411 aa21.33■■□□□ 1
GYPC-205ENST00000464053 MYOM1P52179 1685 aa21.32■■□□□ 1
GYPC-205ENST00000464053 CPS1P31327 1500 aa21.31■■□□□ 1
GYPC-205ENST00000464053 MINK1Q8N4C8 1332 aaPredicted RBP21.31■■□□□ 1
GYPC-205ENST00000464053 ANP32CO43423 234 aa21.31■■□□□ 1
GYPC-205ENST00000464053 NCKAP5LQ9HCH0 1330 aa21.3■■□□□ 1
GYPC-205ENST00000464053 ROBO2Q9HCK4 1378 aa21.29■■□□□ 1
GYPC-205ENST00000464053 SIRT1Q96EB6 747 aa21.28■■□□□ 1
GYPC-205ENST00000464053 FAM135BQ49AJ0 1406 aa21.28■■□□□ 1
GYPC-205ENST00000464053 EVC2Q86UK5 1308 aa21.28■■□□□ 1
GYPC-205ENST00000464053 PANK3Q9H999 370 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms