RNA–Protein interactions for RNA: ENST00000463578.1

HMGN1P8-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 8, humanhuman

BASIC

Gene HMGN1P8, Length 288 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P8-201ENST00000463578 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.3□□□□□ -0.6
HMGN1P8-201ENST00000463578 VARS2Q5ST30 1063 aaKnown RBP11.3□□□□□ -0.6
HMGN1P8-201ENST00000463578 LIMD1Q9UGP4 676 aa11.3□□□□□ -0.6
HMGN1P8-201ENST00000463578 LHX6Q9UPM6 363 aa11.3□□□□□ -0.6
HMGN1P8-201ENST00000463578 RCCD1A6NED2 376 aa11.29□□□□□ -0.6
HMGN1P8-201ENST00000463578 CCDC82Q8N4S0 544 aa11.29□□□□□ -0.6
HMGN1P8-201ENST00000463578 TSKSQ9UJT2 592 aa11.29□□□□□ -0.6
HMGN1P8-201ENST00000463578 RFC5P40937 340 aa11.28□□□□□ -0.6
HMGN1P8-201ENST00000463578 PROSER2Q86WR7 435 aaPredicted RBP11.28□□□□□ -0.6
HMGN1P8-201ENST00000463578 SPIRE2Q8WWL2 714 aa11.28□□□□□ -0.6
HMGN1P8-201ENST00000463578 BCL2L12Q9HB09 334 aa11.28□□□□□ -0.6
HMGN1P8-201ENST00000463578 CD46P15529 392 aa11.27□□□□□ -0.61
HMGN1P8-201ENST00000463578 PPP2R2DQ66LE6 453 aa11.27□□□□□ -0.61
HMGN1P8-201ENST00000463578 SPDYE5A6NIY4 337 aa11.26□□□□□ -0.61
HMGN1P8-201ENST00000463578 BANK1Q8NDB2 785 aa11.26□□□□□ -0.61
HMGN1P8-201ENST00000463578 SNRKQ9NRH2 765 aa11.26□□□□□ -0.61
HMGN1P8-201ENST00000463578 DIXDC1Q155Q3 683 aa11.25□□□□□ -0.61
HMGN1P8-201ENST00000463578 COG6Q9Y2V7 657 aa11.25□□□□□ -0.61
HMGN1P8-201ENST00000463578 RIMBP2O15034 1052 aa11.24□□□□□ -0.61
HMGN1P8-201ENST00000463578 MYT1LQ9UL68 1186 aa11.24□□□□□ -0.61
HMGN1P8-201ENST00000463578 ATP1B4Q9UN42 357 aaPredicted RBP11.24□□□□□ -0.61
HMGN1P8-201ENST00000463578 PPP1R3GB7ZBB8 358 aa11.23□□□□□ -0.61
HMGN1P8-201ENST00000463578 SPTLC1O15269 473 aa11.23□□□□□ -0.61
HMGN1P8-201ENST00000463578 TUSC1Q2TAM9 212 aa11.23□□□□□ -0.61
HMGN1P8-201ENST00000463578 PPP4R3BQ5MIZ7 849 aa11.23□□□□□ -0.61
HMGN1P8-201ENST00000463578 RIC3Q7Z5B4 369 aa11.23□□□□□ -0.61
HMGN1P8-201ENST00000463578 NUDT18Q6ZVK8 323 aa11.22□□□□□ -0.61
HMGN1P8-201ENST00000463578 ZNF777Q9ULD5 760 aaPredicted RBP11.22□□□□□ -0.61
HMGN1P8-201ENST00000463578 TRIM26Q12899 539 aaPredicted RBP11.21□□□□□ -0.61
HMGN1P8-201ENST00000463578 DNAJB2P25686 324 aa11.2□□□□□ -0.62
HMGN1P8-201ENST00000463578 RSBN1LQ6PCB5 846 aaPredicted RBP11.2□□□□□ -0.62
HMGN1P8-201ENST00000463578 TMEM134Q9H6X4 195 aa11.2□□□□□ -0.62
HMGN1P8-201ENST00000463578 MOXD2PA6NHM9 499 aa11.19□□□□□ -0.62
HMGN1P8-201ENST00000463578 TRIM6-TRIM34B2RNG4 842 aa11.19□□□□□ -0.62
HMGN1P8-201ENST00000463578 RAD21O60216 631 aa11.19□□□□□ -0.62
HMGN1P8-201ENST00000463578 HRCP23327 699 aa11.19□□□□□ -0.62
HMGN1P8-201ENST00000463578 TMEM259Q4ZIN3 620 aa11.19□□□□□ -0.62
HMGN1P8-201ENST00000463578 MTMR14Q8NCE2 650 aa11.19□□□□□ -0.62
HMGN1P8-201ENST00000463578 TATDN2Q93075 761 aa11.19□□□□□ -0.62
HMGN1P8-201ENST00000463578 PODXL2Q9NZ53 605 aa11.19□□□□□ -0.62
HMGN1P8-201ENST00000463578 PSDA5PKW4 1024 aaPredicted RBP11.18□□□□□ -0.62
HMGN1P8-201ENST00000463578 PTPREP23469 700 aa11.18□□□□□ -0.62
HMGN1P8-201ENST00000463578 DDX11L8A8MPP1 907 aa11.17□□□□□ -0.62
HMGN1P8-201ENST00000463578 NBPF26B4DH59 902 aa11.17□□□□□ -0.62
HMGN1P8-201ENST00000463578 SULF1Q8IWU6 871 aa11.17□□□□□ -0.62
HMGN1P8-201ENST00000463578 QPCTQ16769 361 aa11.16□□□□□ -0.62
HMGN1P8-201ENST00000463578 PNMA3Q9UL41 463 aa11.16□□□□□ -0.62
HMGN1P8-201ENST00000463578 LILRB3O75022 631 aa11.15□□□□□ -0.62
HMGN1P8-201ENST00000463578 NDUFV2P19404 249 aa11.15□□□□□ -0.62
HMGN1P8-201ENST00000463578 GJA5P36382 358 aa11.15□□□□□ -0.62
HMGN1P8-201ENST00000463578 ZNF687Q8N1G0 1237 aa11.15□□□□□ -0.62
HMGN1P8-201ENST00000463578 PCDHB15Q9Y5E8 787 aa11.15□□□□□ -0.62
HMGN1P8-201ENST00000463578 SMAPO00193 183 aa11.14□□□□□ -0.63
HMGN1P8-201ENST00000463578 PROX2Q3B8N5 592 aa11.14□□□□□ -0.63
HMGN1P8-201ENST00000463578 NUTM1Q86Y26 1132 aa11.14□□□□□ -0.63
HMGN1P8-201ENST00000463578 PACS2Q86VP3 889 aa11.13□□□□□ -0.63
HMGN1P8-201ENST00000463578 SOCS7O14512 581 aa11.12□□□□□ -0.63
HMGN1P8-201ENST00000463578 CSPP1Q1MSJ5 1256 aa11.12□□□□□ -0.63
HMGN1P8-201ENST00000463578 RTL5Q5HYW3 569 aaPredicted RBP11.12□□□□□ -0.63
HMGN1P8-201ENST00000463578 GDPD2Q9HCC8 539 aa11.11□□□□□ -0.63
HMGN1P8-201ENST00000463578 ANKRD13DQ6ZTN6 518 aa11.1□□□□□ -0.63
HMGN1P8-201ENST00000463578 SERPINA10Q9UK55 444 aa11.1□□□□□ -0.63
HMGN1P8-201ENST00000463578 CABLES1Q8TDN4 633 aa11.09□□□□□ -0.63
HMGN1P8-201ENST00000463578 ZNF330Q9Y3S2 320 aaPredicted RBP11.09□□□□□ -0.63
HMGN1P8-201ENST00000463578 KCNK17Q96T54 332 aa11.08□□□□□ -0.64
HMGN1P8-201ENST00000463578 KDM4AO75164 1064 aa11.07□□□□□ -0.64
HMGN1P8-201ENST00000463578 CCDC97Q96F63 343 aaPredicted RBP11.07□□□□□ -0.64
HMGN1P8-201ENST00000463578 ZBED2Q9BTP6 218 aa11.07□□□□□ -0.64
HMGN1P8-201ENST00000463578 AP1G2O75843 785 aa11.06□□□□□ -0.64
HMGN1P8-201ENST00000463578 SLC10A3P09131 477 aa11.06□□□□□ -0.64
HMGN1P8-201ENST00000463578 GCGRP47871 477 aa11.06□□□□□ -0.64
HMGN1P8-201ENST00000463578 PRPF38BQ5VTL8 546 aaKnown RBP11.06□□□□□ -0.64
HMGN1P8-201ENST00000463578 RDH13Q8NBN7 331 aa11.06□□□□□ -0.64
HMGN1P8-201ENST00000463578 HOXA2O43364 376 aa11.05□□□□□ -0.64
HMGN1P8-201ENST00000463578 USP17L8P0C7I0 530 aa11.05□□□□□ -0.64
HMGN1P8-201ENST00000463578 KIAA1468Q9P260 1216 aa11.05□□□□□ -0.64
HMGN1P8-201ENST00000463578 TBC1D2BQ9UPU7 963 aa11.05□□□□□ -0.64
HMGN1P8-201ENST00000463578 GJD4Q96KN9 370 aaPredicted RBP11.04□□□□□ -0.64
HMGN1P8-201ENST00000463578 PCDHGC3Q9UN70 934 aa11.04□□□□□ -0.64
HMGN1P8-201ENST00000463578 PDIA4P13667 645 aaKnown RBP11.03□□□□□ -0.64
HMGN1P8-201ENST00000463578 USP46P62068 366 aa11.03□□□□□ -0.64
HMGN1P8-201ENST00000463578 NECTIN2Q92692 538 aa11.03□□□□□ -0.64
HMGN1P8-201ENST00000463578 POM121CA8CG34 1229 aa11.02□□□□□ -0.65
HMGN1P8-201ENST00000463578 HLA-CQ95604 372 aa11.02□□□□□ -0.65
HMGN1P8-201ENST00000463578 GPR37L1O60883 481 aa11.01□□□□□ -0.65
HMGN1P8-201ENST00000463578 FDX1P10109 184 aa11.01□□□□□ -0.65
HMGN1P8-201ENST00000463578 ABL2P42684 1182 aa11.01□□□□□ -0.65
HMGN1P8-201ENST00000463578 PSEN2P49810 448 aa11.01□□□□□ -0.65
HMGN1P8-201ENST00000463578 GUCA2AQ02747 115 aa11.01□□□□□ -0.65
HMGN1P8-201ENST00000463578 SWT1Q5T5J6 900 aaKnown RBP11.01□□□□□ -0.65
HMGN1P8-201ENST00000463578 ZBTB3Q9H5J0 574 aa11.01□□□□□ -0.65
HMGN1P8-201ENST00000463578 NUTM2BA6NNL0 878 aaPredicted RBP11□□□□□ -0.65
HMGN1P8-201ENST00000463578 NUTM2EB1AL46 878 aaPredicted RBP11□□□□□ -0.65
HMGN1P8-201ENST00000463578 NUTM2DQ5VT03 806 aaPredicted RBP11□□□□□ -0.65
HMGN1P8-201ENST00000463578 POTEEQ6S8J3 1075 aa11□□□□□ -0.65
HMGN1P8-201ENST00000463578 NUTM2AQ8IVF1 878 aaPredicted RBP11□□□□□ -0.65
HMGN1P8-201ENST00000463578 IRF5Q13568 498 aa10.99□□□□□ -0.65
HMGN1P8-201ENST00000463578 LSM11P83369 360 aaKnown RBP eCLIP10.98□□□□□ -0.65
HMGN1P8-201ENST00000463578 HMX1Q9NP08 348 aaPredicted RBP10.98□□□□□ -0.65
HMGN1P8-201ENST00000463578 TRAIPQ9BWF2 469 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms