RNA–Protein interactions for RNA: ENST00000463343.1

SF1-212, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-212ENST00000463343 XIRP1Q702N8 1843 aaKnown RBP26.45■■□□□ 1.82
SF1-212ENST00000463343 KCNA6P17658 529 aa26.45■■□□□ 1.82
SF1-212ENST00000463343 PHF23Q9BUL5 403 aaPredicted RBP26.45■■□□□ 1.82
SF1-212ENST00000463343 RPRD2Q5VT52 1461 aaKnown RBP26.44■■□□□ 1.82
SF1-212ENST00000463343 FAM135BQ49AJ0 1406 aa26.43■■□□□ 1.82
SF1-212ENST00000463343 E9PCH4 1651 aa26.38■■□□□ 1.81
SF1-212ENST00000463343 RAB3GAP2Q9H2M9 1393 aa26.38■■□□□ 1.81
SF1-212ENST00000463343 SLC4A1APQ9BWU0 796 aaKnown RBP26.38■■□□□ 1.81
SF1-212ENST00000463343 TMEM94Q12767 1356 aa26.37■■□□□ 1.81
SF1-212ENST00000463343 ADGRB3O60242 1522 aa26.35■■□□□ 1.81
SF1-212ENST00000463343 SLC26A8Q96RN1 970 aa26.35■■□□□ 1.81
SF1-212ENST00000463343 ACIN1Q9UKV3 1341 aaKnown RBP26.35■■□□□ 1.81
SF1-212ENST00000463343 HDGFP51858 240 aaKnown RBP26.34■■□□□ 1.81
SF1-212ENST00000463343 PROSER2Q86WR7 435 aaPredicted RBP26.34■■□□□ 1.81
SF1-212ENST00000463343 MPHOSPH9Q99550 1183 aa26.33■■□□□ 1.81
SF1-212ENST00000463343 HRCP23327 699 aa26.32■■□□□ 1.8
SF1-212ENST00000463343 NKTRP30414 1462 aaKnown RBP26.31■■□□□ 1.8
SF1-212ENST00000463343 SENP3Q9H4L4 574 aaPredicted RBP26.31■■□□□ 1.8
SF1-212ENST00000463343 NWD1Q149M9 1564 aa26.29■■□□□ 1.8
SF1-212ENST00000463343 TRIM26Q12899 539 aaPredicted RBP26.28■■□□□ 1.8
SF1-212ENST00000463343 ZFYVE9O95405 1425 aa26.28■■□□□ 1.8
SF1-212ENST00000463343 FOXD1Q16676 465 aa26.27■■□□□ 1.8
SF1-212ENST00000463343 RGS17Q9UGC6 210 aaPredicted RBP26.27■■□□□ 1.8
SF1-212ENST00000463343 PLEKHG1Q9ULL1 1385 aa26.27■■□□□ 1.8
SF1-212ENST00000463343 TBX22Q9Y458 520 aa26.24■■□□□ 1.79
SF1-212ENST00000463343 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.23■■□□□ 1.79
SF1-212ENST00000463343 BCANQ96GW7 911 aa26.23■■□□□ 1.79
SF1-212ENST00000463343 NCOA3Q9Y6Q9 1424 aa26.22■■□□□ 1.79
SF1-212ENST00000463343 MSH6P52701 1360 aa26.22■■□□□ 1.79
SF1-212ENST00000463343 CHGAP10645 457 aaKnown RBP26.22■■□□□ 1.79
SF1-212ENST00000463343 RIMS2Q9UQ26 1411 aa26.22■■□□□ 1.79
SF1-212ENST00000463343 TMEM131LA2VDJ0 1609 aa26.21■■□□□ 1.79
SF1-212ENST00000463343 CHD2O14647 1828 aaKnown RBP26.21■■□□□ 1.79
SF1-212ENST00000463343 SLAIN2Q9P270 581 aa26.21■■□□□ 1.79
SF1-212ENST00000463343 ROBO1Q9Y6N7 1651 aa26.21■■□□□ 1.79
SF1-212ENST00000463343 RBM33Q96EV2 1170 aaKnown RBP26.19■■□□□ 1.78
SF1-212ENST00000463343 SPHKAPQ2M3C7 1700 aa26.19■■□□□ 1.78
SF1-212ENST00000463343 MYO5BQ9ULV0 1848 aa26.18■■□□□ 1.78
SF1-212ENST00000463343 PPP1R15AO75807 674 aaPredicted RBP26.18■■□□□ 1.78
SF1-212ENST00000463343 TRPM2O94759 1503 aa26.15■■□□□ 1.78
SF1-212ENST00000463343 PIK3R4Q99570 1358 aa26.15■■□□□ 1.78
SF1-212ENST00000463343 CLTCL1P53675 1640 aa26.1■■□□□ 1.77
SF1-212ENST00000463343 ADAMTS13Q76LX8 1427 aa26.1■■□□□ 1.77
SF1-212ENST00000463343 JCADQ9P266 1359 aa26.09■■□□□ 1.77
SF1-212ENST00000463343 DIP2AQ14689 1571 aa26.09■■□□□ 1.77
SF1-212ENST00000463343 POTEAQ6S8J7 498 aa26.09■■□□□ 1.77
SF1-212ENST00000463343 C19orf44Q9H6X5 657 aa26.08■■□□□ 1.77
SF1-212ENST00000463343 NUTM2DQ5VT03 806 aaPredicted RBP26.07■■□□□ 1.76
SF1-212ENST00000463343 ZNF326Q5BKZ1 582 aaKnown RBP26.06■■□□□ 1.76
SF1-212ENST00000463343 CADPS2Q86UW7 1296 aa26.06■■□□□ 1.76
SF1-212ENST00000463343 PHLPP1O60346 1717 aa26.05■■□□□ 1.76
SF1-212ENST00000463343 CCDC144AA2RUR9 1427 aa26.04■■□□□ 1.76
SF1-212ENST00000463343 ANKRD30BQ9BXX2 1392 aa26.03■■□□□ 1.76
SF1-212ENST00000463343 SPATA31A6Q5VVP1 1343 aa26■■□□□ 1.75
SF1-212ENST00000463343 ATF3P18847 181 aa26■■□□□ 1.75
SF1-212ENST00000463343 C14orf37Q86TY3 774 aa26■■□□□ 1.75
SF1-212ENST00000463343 COL16A1Q07092 1604 aaPredicted RBP25.99■■□□□ 1.75
SF1-212ENST00000463343 AMOTL2Q9Y2J4 779 aa25.99■■□□□ 1.75
SF1-212ENST00000463343 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.99■■□□□ 1.75
SF1-212ENST00000463343 KIF1BO60333 1816 aa25.98■■□□□ 1.75
SF1-212ENST00000463343 RGL3Q3MIN7 710 aa25.96■■□□□ 1.75
SF1-212ENST00000463343 RPGRIP1LQ68CZ1 1315 aa25.95■■□□□ 1.75
SF1-212ENST00000463343 DCCP43146 1447 aa25.95■■□□□ 1.74
SF1-212ENST00000463343 SPATA31E1Q6ZUB1 1445 aa25.95■■□□□ 1.74
SF1-212ENST00000463343 AHDC1Q5TGY3 1603 aaPredicted RBP25.95■■□□□ 1.74
SF1-212ENST00000463343 PTPRUQ92729 1446 aa25.94■■□□□ 1.74
SF1-212ENST00000463343 SETBP1Q9Y6X0 1596 aa25.91■■□□□ 1.74
SF1-212ENST00000463343 PCGF6Q9BYE7 350 aa25.91■■□□□ 1.74
SF1-212ENST00000463343 NEXMIFQ5QGS0 1516 aa25.91■■□□□ 1.74
SF1-212ENST00000463343 VGFO15240 615 aaPredicted RBP25.9■■□□□ 1.74
SF1-212ENST00000463343 BRINP3Q76B58 766 aa25.89■■□□□ 1.74
SF1-212ENST00000463343 ZNF772Q68DY9 489 aaPredicted RBP25.88■■□□□ 1.73
SF1-212ENST00000463343 SHPRHQ149N8 1683 aa25.87■■□□□ 1.73
SF1-212ENST00000463343 NRXN3Q9Y4C0 1643 aa25.87■■□□□ 1.73
SF1-212ENST00000463343 XRN1Q8IZH2 1706 aaKnown RBP25.86■■□□□ 1.73
SF1-212ENST00000463343 LRP6O75581 1613 aa25.85■■□□□ 1.73
SF1-212ENST00000463343 DHX57Q6P158 1386 aaKnown RBP25.85■■□□□ 1.73
SF1-212ENST00000463343 ADGRF5Q8IZF2 1346 aa25.83■■□□□ 1.73
SF1-212ENST00000463343 MEX3CQ5U5Q3 659 aaKnown RBP25.82■■□□□ 1.72
SF1-212ENST00000463343 METP08581 1390 aa25.82■■□□□ 1.72
SF1-212ENST00000463343 MST1RQ04912 1400 aa25.8■■□□□ 1.72
SF1-212ENST00000463343 PPLO60437 1756 aa25.79■■□□□ 1.72
SF1-212ENST00000463343 LRRC59Q96AG4 307 aaKnown RBP25.78■■□□□ 1.72
SF1-212ENST00000463343 ASXL1Q8IXJ9 1541 aa25.78■■□□□ 1.72
SF1-212ENST00000463343 SIN3AQ96ST3 1273 aa25.77■■□□□ 1.72
SF1-212ENST00000463343 ADGRL3Q9HAR2 1447 aa25.76■■□□□ 1.71
SF1-212ENST00000463343 NHSL1Q5SYE7 1610 aa25.74■■□□□ 1.71
SF1-212ENST00000463343 RXRBP28702 533 aa25.73■■□□□ 1.71
SF1-212ENST00000463343 DCAF11Q8TEB1 546 aa25.73■■□□□ 1.71
SF1-212ENST00000463343 SETD1AO15047 1707 aaKnown RBP25.72■■□□□ 1.71
SF1-212ENST00000463343 IFT172Q9UG01 1749 aa25.72■■□□□ 1.71
SF1-212ENST00000463343 KDM2AQ9Y2K7 1162 aa25.72■■□□□ 1.71
SF1-212ENST00000463343 CDK12Q9NYV4 1490 aaPredicted RBP25.72■■□□□ 1.71
SF1-212ENST00000463343 NEUROD1Q13562 356 aa25.7■■□□□ 1.7
SF1-212ENST00000463343 NUTM2BA6NNL0 878 aaPredicted RBP25.69■■□□□ 1.7
SF1-212ENST00000463343 NUTM2EB1AL46 878 aaPredicted RBP25.69■■□□□ 1.7
SF1-212ENST00000463343 NUTM2AQ8IVF1 878 aaPredicted RBP25.69■■□□□ 1.7
SF1-212ENST00000463343 UPF1Q92900 1129 aaKnown RBP eCLIP25.69■■□□□ 1.7
SF1-212ENST00000463343 STAC3Q96MF2 364 aa25.68■■□□□ 1.7
SF1-212ENST00000463343 PRAG1Q86YV5 1406 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms