RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 PPP1R15AO75807 674 aaPredicted RBP10.99□□□□□ -0.65
PTPRF-210ENST00000463041 PROSER2Q86WR7 435 aaPredicted RBP10.99□□□□□ -0.65
PTPRF-210ENST00000463041 TBX22Q9Y458 520 aa10.99□□□□□ -0.65
PTPRF-210ENST00000463041 TMEM131LA2VDJ0 1609 aa10.98□□□□□ -0.65
PTPRF-210ENST00000463041 HSPA1LP34931 641 aa10.98□□□□□ -0.65
PTPRF-210ENST00000463041 DISP3Q9P2K9 1392 aa10.98□□□□□ -0.65
PTPRF-210ENST00000463041 PLEKHG1Q9ULL1 1385 aa10.98□□□□□ -0.65
PTPRF-210ENST00000463041 ZFYVE9O95405 1425 aa10.98□□□□□ -0.65
PTPRF-210ENST00000463041 RIMS2Q9UQ26 1411 aa10.98□□□□□ -0.65
PTPRF-210ENST00000463041 NAIPQ13075 1403 aa10.97□□□□□ -0.65
PTPRF-210ENST00000463041 TRIM52Q96A61 297 aa10.96□□□□□ -0.65
PTPRF-210ENST00000463041 XIRP1Q702N8 1843 aaKnown RBP10.95□□□□□ -0.66
PTPRF-210ENST00000463041 CHD2O14647 1828 aaKnown RBP10.94□□□□□ -0.66
PTPRF-210ENST00000463041 NUTM2DQ5VT03 806 aaPredicted RBP10.94□□□□□ -0.66
PTPRF-210ENST00000463041 HFM1A2PYH4 1435 aa10.93□□□□□ -0.66
PTPRF-210ENST00000463041 TMEM94Q12767 1356 aa10.93□□□□□ -0.66
PTPRF-210ENST00000463041 SENP3Q9H4L4 574 aaPredicted RBP10.93□□□□□ -0.66
PTPRF-210ENST00000463041 ALKQ9UM73 1620 aa10.93□□□□□ -0.66
PTPRF-210ENST00000463041 SPHKAPQ2M3C7 1700 aa10.92□□□□□ -0.66
PTPRF-210ENST00000463041 PIK3R4Q99570 1358 aa10.92□□□□□ -0.66
PTPRF-210ENST00000463041 ACIN1Q9UKV3 1341 aaKnown RBP10.92□□□□□ -0.66
PTPRF-210ENST00000463041 ZNF326Q5BKZ1 582 aaKnown RBP10.92□□□□□ -0.66
PTPRF-210ENST00000463041 SLC4A1APQ9BWU0 796 aaKnown RBP10.92□□□□□ -0.66
PTPRF-210ENST00000463041 RBM33Q96EV2 1170 aaKnown RBP10.91□□□□□ -0.66
PTPRF-210ENST00000463041 NKTRP30414 1462 aaKnown RBP10.91□□□□□ -0.66
PTPRF-210ENST00000463041 FAM135BQ49AJ0 1406 aa10.91□□□□□ -0.66
PTPRF-210ENST00000463041 ILDR2Q71H61 639 aa10.9□□□□□ -0.66
PTPRF-210ENST00000463041 ADAMTS13Q76LX8 1427 aa10.9□□□□□ -0.66
PTPRF-210ENST00000463041 NCOA3Q9Y6Q9 1424 aa10.9□□□□□ -0.66
PTPRF-210ENST00000463041 MSH6P52701 1360 aa10.9□□□□□ -0.67
PTPRF-210ENST00000463041 KIF1BO60333 1816 aa10.89□□□□□ -0.67
PTPRF-210ENST00000463041 SLAIN2Q9P270 581 aa10.89□□□□□ -0.67
PTPRF-210ENST00000463041 AMOTL2Q9Y2J4 779 aa10.89□□□□□ -0.67
PTPRF-210ENST00000463041 NWD1Q149M9 1564 aa10.89□□□□□ -0.67
PTPRF-210ENST00000463041 VGFO15240 615 aaPredicted RBP10.88□□□□□ -0.67
PTPRF-210ENST00000463041 DIP2AQ14689 1571 aa10.88□□□□□ -0.67
PTPRF-210ENST00000463041 C19orf44Q9H6X5 657 aa10.88□□□□□ -0.67
PTPRF-210ENST00000463041 RPGRIP1LQ68CZ1 1315 aa10.87□□□□□ -0.67
PTPRF-210ENST00000463041 TRPM2O94759 1503 aa10.86□□□□□ -0.67
PTPRF-210ENST00000463041 C14orf37Q86TY3 774 aa10.86□□□□□ -0.67
PTPRF-210ENST00000463041 CADPS2Q86UW7 1296 aa10.86□□□□□ -0.67
PTPRF-210ENST00000463041 MPHOSPH9Q99550 1183 aa10.86□□□□□ -0.67
PTPRF-210ENST00000463041 CLTCL1P53675 1640 aa10.85□□□□□ -0.67
PTPRF-210ENST00000463041 SOCS7O14512 581 aa10.85□□□□□ -0.67
PTPRF-210ENST00000463041 ATF3P18847 181 aa10.85□□□□□ -0.67
PTPRF-210ENST00000463041 PTPRUQ92729 1446 aa10.84□□□□□ -0.67
PTPRF-210ENST00000463041 SETBP1Q9Y6X0 1596 aa10.83□□□□□ -0.68
PTPRF-210ENST00000463041 FOXD1Q16676 465 aa10.83□□□□□ -0.68
PTPRF-210ENST00000463041 METP08581 1390 aa10.82□□□□□ -0.68
PTPRF-210ENST00000463041 PHF23Q9BUL5 403 aaPredicted RBP10.82□□□□□ -0.68
PTPRF-210ENST00000463041 NEXMIFQ5QGS0 1516 aa10.82□□□□□ -0.68
PTPRF-210ENST00000463041 SETD5Q9C0A6 1442 aa10.82□□□□□ -0.68
PTPRF-210ENST00000463041 ROBO1Q9Y6N7 1651 aa10.82□□□□□ -0.68
PTPRF-210ENST00000463041 MED1Q15648 1581 aaPredicted RBP10.82□□□□□ -0.68
PTPRF-210ENST00000463041 NRXN3Q9Y4C0 1643 aa10.81□□□□□ -0.68
PTPRF-210ENST00000463041 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.81□□□□□ -0.68
PTPRF-210ENST00000463041 CCDC144AA2RUR9 1427 aa10.79□□□□□ -0.68
PTPRF-210ENST00000463041 HRCP23327 699 aa10.79□□□□□ -0.68
PTPRF-210ENST00000463041 RGL3Q3MIN7 710 aa10.79□□□□□ -0.68
PTPRF-210ENST00000463041 XRN1Q8IZH2 1706 aaKnown RBP10.78□□□□□ -0.68
PTPRF-210ENST00000463041 PPLO60437 1756 aa10.77□□□□□ -0.68
PTPRF-210ENST00000463041 DCCP43146 1447 aa10.77□□□□□ -0.68
PTPRF-210ENST00000463041 PHLPP1O60346 1717 aa10.77□□□□□ -0.69
PTPRF-210ENST00000463041 ANKRD30BQ9BXX2 1392 aa10.77□□□□□ -0.69
PTPRF-210ENST00000463041 JCADQ9P266 1359 aa10.77□□□□□ -0.69
PTPRF-210ENST00000463041 BRINP3Q76B58 766 aa10.76□□□□□ -0.69
PTPRF-210ENST00000463041 ADGRF5Q8IZF2 1346 aa10.76□□□□□ -0.69
PTPRF-210ENST00000463041 SPATA31E1Q6ZUB1 1445 aa10.75□□□□□ -0.69
PTPRF-210ENST00000463041 RGS17Q9UGC6 210 aaPredicted RBP10.75□□□□□ -0.69
PTPRF-210ENST00000463041 RAB3GAP2Q9H2M9 1393 aa10.75□□□□□ -0.69
PTPRF-210ENST00000463041 SETD1AO15047 1707 aaKnown RBP10.73□□□□□ -0.69
PTPRF-210ENST00000463041 LRRC59Q96AG4 307 aaKnown RBP10.73□□□□□ -0.69
PTPRF-210ENST00000463041 SPATA31A6Q5VVP1 1343 aa10.73□□□□□ -0.69
PTPRF-210ENST00000463041 ROBO2Q9HCK4 1378 aa10.73□□□□□ -0.69
PTPRF-210ENST00000463041 ADGRL3Q9HAR2 1447 aa10.73□□□□□ -0.69
PTPRF-210ENST00000463041 MST1RQ04912 1400 aa10.72□□□□□ -0.69
PTPRF-210ENST00000463041 PTCH1Q13635 1447 aa10.72□□□□□ -0.69
PTPRF-210ENST00000463041 PRAG1Q86YV5 1406 aa10.72□□□□□ -0.69
PTPRF-210ENST00000463041 AHDC1Q5TGY3 1603 aaPredicted RBP10.72□□□□□ -0.69
PTPRF-210ENST00000463041 COL16A1Q07092 1604 aaPredicted RBP10.71□□□□□ -0.69
PTPRF-210ENST00000463041 SIRT1Q96EB6 747 aa10.71□□□□□ -0.69
PTPRF-210ENST00000463041 STAC3Q96MF2 364 aa10.71□□□□□ -0.69
PTPRF-210ENST00000463041 C14orf93Q9H972 538 aaKnown RBP10.71□□□□□ -0.69
PTPRF-210ENST00000463041 STK26Q9P289 416 aa10.71□□□□□ -0.69
PTPRF-210ENST00000463041 ABCC11Q96J66 1382 aa10.7□□□□□ -0.7
PTPRF-210ENST00000463041 TMEM132EQ6IEE7 984 aa10.7□□□□□ -0.7
PTPRF-210ENST00000463041 IFT172Q9UG01 1749 aa10.7□□□□□ -0.7
PTPRF-210ENST00000463041 LRPPRCP42704 1394 aaKnown RBP10.69□□□□□ -0.7
PTPRF-210ENST00000463041 POTEAQ6S8J7 498 aa10.69□□□□□ -0.7
PTPRF-210ENST00000463041 NALCNQ8IZF0 1738 aa10.69□□□□□ -0.7
PTPRF-210ENST00000463041 ASXL1Q8IXJ9 1541 aa10.68□□□□□ -0.7
PTPRF-210ENST00000463041 C1orf167Q5SNV9 1468 aa10.68□□□□□ -0.7
PTPRF-210ENST00000463041 MEX3CQ5U5Q3 659 aaKnown RBP10.68□□□□□ -0.7
PTPRF-210ENST00000463041 WAPLQ7Z5K2 1190 aa10.68□□□□□ -0.7
PTPRF-210ENST00000463041 ORAI2Q96SN7 254 aa10.68□□□□□ -0.7
PTPRF-210ENST00000463041 PIK3C2GO75747 1445 aa10.67□□□□□ -0.7
PTPRF-210ENST00000463041 DHX57Q6P158 1386 aaKnown RBP10.67□□□□□ -0.7
PTPRF-210ENST00000463041 SHPRHQ149N8 1683 aa10.67□□□□□ -0.7
PTPRF-210ENST00000463041 CFAP70Q5T0N1 1121 aa10.67□□□□□ -0.7
PTPRF-210ENST00000463041 DDX17Q92841 729 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms