RNA–Protein interactions for RNA: ENST00000462391.5

NPM3-202, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

TSL 3

Gene NPM3, Length 481 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-202ENST00000462391 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.98■■■□□ 2.71
NPM3-202ENST00000462391 PLEKHG1Q9ULL1 1385 aa31.97■■■□□ 2.71
NPM3-202ENST00000462391 PPP1R15AO75807 674 aaPredicted RBP31.96■■■□□ 2.71
NPM3-202ENST00000462391 TRIM52Q96A61 297 aa31.93■■■□□ 2.7
NPM3-202ENST00000462391 SLC26A8Q96RN1 970 aa31.93■■■□□ 2.7
NPM3-202ENST00000462391 BCANQ96GW7 911 aa31.92■■■□□ 2.7
NPM3-202ENST00000462391 TRPM2O94759 1503 aa31.91■■■□□ 2.7
NPM3-202ENST00000462391 KCNA6P17658 529 aa31.9■■■□□ 2.7
NPM3-202ENST00000462391 NWD1Q149M9 1564 aa31.86■■■□□ 2.69
NPM3-202ENST00000462391 SLC4A1APQ9BWU0 796 aaKnown RBP31.85■■■□□ 2.69
NPM3-202ENST00000462391 NKTRP30414 1462 aaKnown RBP31.84■■■□□ 2.69
NPM3-202ENST00000462391 CLTCL1P53675 1640 aa31.84■■■□□ 2.69
NPM3-202ENST00000462391 DIP2AQ14689 1571 aa31.83■■■□□ 2.69
NPM3-202ENST00000462391 TBX22Q9Y458 520 aa31.83■■■□□ 2.69
NPM3-202ENST00000462391 ALKQ9UM73 1620 aa31.82■■■□□ 2.69
NPM3-202ENST00000462391 SCAF1Q9H7N4 1312 aaKnown RBP31.82■■■□□ 2.68
NPM3-202ENST00000462391 ACIN1Q9UKV3 1341 aaKnown RBP31.82■■■□□ 2.68
NPM3-202ENST00000462391 PIP4K2BP78356 416 aa31.82■■■□□ 2.68
NPM3-202ENST00000462391 XIRP1Q702N8 1843 aaKnown RBP31.82■■■□□ 2.68
NPM3-202ENST00000462391 ADAMTS13Q76LX8 1427 aa31.78■■■□□ 2.68
NPM3-202ENST00000462391 CHD2O14647 1828 aaKnown RBP31.78■■■□□ 2.68
NPM3-202ENST00000462391 KIF1BO60333 1816 aa31.78■■■□□ 2.68
NPM3-202ENST00000462391 NUTM2DQ5VT03 806 aaPredicted RBP31.78■■■□□ 2.68
NPM3-202ENST00000462391 TMEM94Q12767 1356 aa31.78■■■□□ 2.68
NPM3-202ENST00000462391 ZNF326Q5BKZ1 582 aaKnown RBP31.77■■■□□ 2.68
NPM3-202ENST00000462391 PROSER2Q86WR7 435 aaPredicted RBP31.76■■■□□ 2.67
NPM3-202ENST00000462391 SENP3Q9H4L4 574 aaPredicted RBP31.76■■■□□ 2.67
NPM3-202ENST00000462391 PIK3R4Q99570 1358 aa31.76■■■□□ 2.67
NPM3-202ENST00000462391 SETBP1Q9Y6X0 1596 aa31.72■■■□□ 2.67
NPM3-202ENST00000462391 SETD5Q9C0A6 1442 aa31.71■■■□□ 2.67
NPM3-202ENST00000462391 NEXMIFQ5QGS0 1516 aa31.7■■■□□ 2.67
NPM3-202ENST00000462391 HSPA1LP34931 641 aa31.7■■■□□ 2.67
NPM3-202ENST00000462391 MPHOSPH9Q99550 1183 aa31.67■■■□□ 2.66
NPM3-202ENST00000462391 NRXN3Q9Y4C0 1643 aa31.66■■■□□ 2.66
NPM3-202ENST00000462391 NCOA3Q9Y6Q9 1424 aa31.65■■■□□ 2.66
NPM3-202ENST00000462391 MSH6P52701 1360 aa31.64■■■□□ 2.66
NPM3-202ENST00000462391 RPGRIP1LQ68CZ1 1315 aa31.62■■■□□ 2.65
NPM3-202ENST00000462391 CCDC144AA2RUR9 1427 aa31.61■■■□□ 2.65
NPM3-202ENST00000462391 FOXD1Q16676 465 aa31.61■■■□□ 2.65
NPM3-202ENST00000462391 RBM33Q96EV2 1170 aaKnown RBP31.61■■■□□ 2.65
NPM3-202ENST00000462391 DISP3Q9P2K9 1392 aa31.6■■■□□ 2.65
NPM3-202ENST00000462391 VGFO15240 615 aaPredicted RBP31.59■■■□□ 2.65
NPM3-202ENST00000462391 FAM135BQ49AJ0 1406 aa31.58■■■□□ 2.65
NPM3-202ENST00000462391 AMOTL2Q9Y2J4 779 aa31.57■■■□□ 2.64
NPM3-202ENST00000462391 PTPRUQ92729 1446 aa31.57■■■□□ 2.64
NPM3-202ENST00000462391 RAB3GAP2Q9H2M9 1393 aa31.56■■■□□ 2.64
NPM3-202ENST00000462391 XRN1Q8IZH2 1706 aaKnown RBP31.55■■■□□ 2.64
NPM3-202ENST00000462391 PPLO60437 1756 aa31.53■■■□□ 2.64
NPM3-202ENST00000462391 METP08581 1390 aa31.52■■■□□ 2.64
NPM3-202ENST00000462391 C14orf37Q86TY3 774 aa31.51■■■□□ 2.63
NPM3-202ENST00000462391 SPATA31E1Q6ZUB1 1445 aa31.49■■■□□ 2.63
NPM3-202ENST00000462391 C19orf44Q9H6X5 657 aa31.48■■■□□ 2.63
NPM3-202ENST00000462391 ROBO1Q9Y6N7 1651 aa31.48■■■□□ 2.63
NPM3-202ENST00000462391 SLAIN2Q9P270 581 aa31.47■■■□□ 2.63
NPM3-202ENST00000462391 HRCP23327 699 aa31.46■■■□□ 2.63
NPM3-202ENST00000462391 CADPS2Q86UW7 1296 aa31.45■■■□□ 2.63
NPM3-202ENST00000462391 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.45■■■□□ 2.63
NPM3-202ENST00000462391 SETD1AO15047 1707 aaKnown RBP31.44■■■□□ 2.62
NPM3-202ENST00000462391 ANKRD30BQ9BXX2 1392 aa31.43■■■□□ 2.62
NPM3-202ENST00000462391 DCCP43146 1447 aa31.42■■■□□ 2.62
NPM3-202ENST00000462391 ATF3P18847 181 aa31.42■■■□□ 2.62
NPM3-202ENST00000462391 MED1Q15648 1581 aaPredicted RBP31.41■■■□□ 2.62
NPM3-202ENST00000462391 RGL3Q3MIN7 710 aa31.4■■■□□ 2.62
NPM3-202ENST00000462391 IFT172Q9UG01 1749 aa31.4■■■□□ 2.62
NPM3-202ENST00000462391 PRAG1Q86YV5 1406 aa31.38■■■□□ 2.61
NPM3-202ENST00000462391 PTCH1Q13635 1447 aa31.37■■■□□ 2.61
NPM3-202ENST00000462391 ADGRF5Q8IZF2 1346 aa31.34■■■□□ 2.61
NPM3-202ENST00000462391 ADGRL3Q9HAR2 1447 aa31.33■■■□□ 2.61
NPM3-202ENST00000462391 PHLPP1O60346 1717 aa31.29■■■□□ 2.6
NPM3-202ENST00000462391 PIK3C2GO75747 1445 aa31.29■■■□□ 2.6
NPM3-202ENST00000462391 ROBO2Q9HCK4 1378 aa31.28■■■□□ 2.6
NPM3-202ENST00000462391 NALCNQ8IZF0 1738 aa31.27■■■□□ 2.6
NPM3-202ENST00000462391 ILDR2Q71H61 639 aa31.27■■■□□ 2.6
NPM3-202ENST00000462391 MYOM2P54296 1465 aa31.25■■■□□ 2.59
NPM3-202ENST00000462391 MST1RQ04912 1400 aa31.24■■■□□ 2.59
NPM3-202ENST00000462391 AHDC1Q5TGY3 1603 aaPredicted RBP31.24■■■□□ 2.59
NPM3-202ENST00000462391 NRXN1Q9ULB1 1477 aa31.22■■■□□ 2.59
NPM3-202ENST00000462391 COL16A1Q07092 1604 aaPredicted RBP31.21■■■□□ 2.59
NPM3-202ENST00000462391 BRINP3Q76B58 766 aa31.21■■■□□ 2.59
NPM3-202ENST00000462391 PHF23Q9BUL5 403 aaPredicted RBP31.21■■■□□ 2.59
NPM3-202ENST00000462391 TECPR2O15040 1411 aa31.2■■■□□ 2.59
NPM3-202ENST00000462391 LRPPRCP42704 1394 aaKnown RBP31.19■■■□□ 2.58
NPM3-202ENST00000462391 JCADQ9P266 1359 aa31.19■■■□□ 2.58
NPM3-202ENST00000462391 LAMC1P11047 1609 aa31.19■■■□□ 2.58
NPM3-202ENST00000462391 ASXL1Q8IXJ9 1541 aa31.18■■■□□ 2.58
NPM3-202ENST00000462391 ABCC11Q96J66 1382 aa31.17■■■□□ 2.58
NPM3-202ENST00000462391 KNDC1Q76NI1 1749 aa31.16■■■□□ 2.58
NPM3-202ENST00000462391 C14orf93Q9H972 538 aaKnown RBP31.16■■■□□ 2.58
NPM3-202ENST00000462391 STAC3Q96MF2 364 aa31.12■■■□□ 2.57
NPM3-202ENST00000462391 STK26Q9P289 416 aa31.12■■■□□ 2.57
NPM3-202ENST00000462391 YTHDC2Q9H6S0 1430 aaKnown RBP31.12■■■□□ 2.57
NPM3-202ENST00000462391 NHSL1Q5SYE7 1610 aa31.11■■■□□ 2.57
NPM3-202ENST00000462391 TMEM132EQ6IEE7 984 aa31.11■■■□□ 2.57
NPM3-202ENST00000462391 CDC42BPGQ6DT37 1551 aa31.1■■■□□ 2.57
NPM3-202ENST00000462391 C1orf167Q5SNV9 1468 aa31.1■■■□□ 2.57
NPM3-202ENST00000462391 DHX57Q6P158 1386 aaKnown RBP31.07■■■□□ 2.56
NPM3-202ENST00000462391 SOCS7O14512 581 aa31.07■■■□□ 2.56
NPM3-202ENST00000462391 CFAP70Q5T0N1 1121 aa31.07■■■□□ 2.56
NPM3-202ENST00000462391 SIRT1Q96EB6 747 aa31.07■■■□□ 2.56
NPM3-202ENST00000462391 SHPRHQ149N8 1683 aa31.06■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms