RNA–Protein interactions for RNA: ENST00000462256.5

DDX39B-215, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 4,027 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-215ENST00000462256 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.52□□□□□ -0.41
DDX39B-215ENST00000462256 C19orf44Q9H6X5 657 aa12.52□□□□□ -0.41
DDX39B-215ENST00000462256 HECW2Q9P2P5 1572 aa12.51□□□□□ -0.41
DDX39B-215ENST00000462256 SAMD9LQ8IVG5 1584 aa12.5□□□□□ -0.41
DDX39B-215ENST00000462256 AMPHP49418 695 aa12.49□□□□□ -0.41
DDX39B-215ENST00000462256 FOXO3O43524 673 aa12.48□□□□□ -0.41
DDX39B-215ENST00000462256 XPCQ01831 940 aaPredicted RBP12.48□□□□□ -0.41
DDX39B-215ENST00000462256 NGLY1Q96IV0 654 aa12.48□□□□□ -0.41
DDX39B-215ENST00000462256 PTPRMP28827 1452 aa12.48□□□□□ -0.41
DDX39B-215ENST00000462256 WAPLQ7Z5K2 1190 aa12.48□□□□□ -0.41
DDX39B-215ENST00000462256 CERKQ8TCT0 537 aa12.48□□□□□ -0.41
DDX39B-215ENST00000462256 TCOF1Q13428 1488 aaKnown RBP12.48□□□□□ -0.41
DDX39B-215ENST00000462256 ADAMTS2O95450 1211 aa12.47□□□□□ -0.41
DDX39B-215ENST00000462256 ARHGEF12Q9NZN5 1544 aa12.47□□□□□ -0.41
DDX39B-215ENST00000462256 DDX10Q13206 875 aaKnown RBP12.47□□□□□ -0.41
DDX39B-215ENST00000462256 TMEM2Q9UHN6 1383 aa12.47□□□□□ -0.41
DDX39B-215ENST00000462256 LTKP29376 864 aa12.46□□□□□ -0.41
DDX39B-215ENST00000462256 NLRP6P59044 892 aa12.46□□□□□ -0.41
DDX39B-215ENST00000462256 ZNF335Q9H4Z2 1342 aaPredicted RBP12.46□□□□□ -0.41
DDX39B-215ENST00000462256 NUTM2GQ5VZR2 741 aa12.46□□□□□ -0.41
DDX39B-215ENST00000462256 MORC1Q86VD1 984 aa12.46□□□□□ -0.41
DDX39B-215ENST00000462256 LTV1Q96GA3 475 aaPredicted RBP12.46□□□□□ -0.41
DDX39B-215ENST00000462256 ST20-MTHFSA0A0A6YYL1 179 aa12.46□□□□□ -0.42
DDX39B-215ENST00000462256 ABTB2Q8N961 1025 aa12.46□□□□□ -0.42
DDX39B-215ENST00000462256 ANP32EQ9BTT0 268 aa12.46□□□□□ -0.42
DDX39B-215ENST00000462256 SF3B2Q13435 895 aaKnown RBP12.45□□□□□ -0.42
DDX39B-215ENST00000462256 NUDCQ9Y266 331 aa12.45□□□□□ -0.42
DDX39B-215ENST00000462256 ADGRF5Q8IZF2 1346 aa12.45□□□□□ -0.42
DDX39B-215ENST00000462256 PREX2Q70Z35 1606 aa12.45□□□□□ -0.42
DDX39B-215ENST00000462256 CABP2Q9NPB3 220 aa12.45□□□□□ -0.42
DDX39B-215ENST00000462256 PRDM11Q9NQV5 511 aa12.45□□□□□ -0.42
DDX39B-215ENST00000462256 PTPRKQ15262 1439 aa12.45□□□□□ -0.42
DDX39B-215ENST00000462256 COG3Q96JB2 828 aa12.44□□□□□ -0.42
DDX39B-215ENST00000462256 PHF8Q9UPP1 1060 aa12.44□□□□□ -0.42
DDX39B-215ENST00000462256 WDR43Q15061 677 aaKnown RBP eCLIP12.44□□□□□ -0.428e-58■□□□□ 9.7
DDX39B-215ENST00000462256 NOS1P29475 1434 aa12.43□□□□□ -0.42
DDX39B-215ENST00000462256 NPHP4O75161 1426 aaPredicted RBP12.43□□□□□ -0.42
DDX39B-215ENST00000462256 LRPPRCP42704 1394 aaKnown RBP12.43□□□□□ -0.42
DDX39B-215ENST00000462256 CDK19Q9BWU1 502 aa12.43□□□□□ -0.42
DDX39B-215ENST00000462256 ZNF316A6NFI3 1004 aaPredicted RBP12.42□□□□□ -0.42
DDX39B-215ENST00000462256 NLRP13Q86W25 1043 aa12.42□□□□□ -0.42
DDX39B-215ENST00000462256 USP35Q9P2H5 1018 aa12.42□□□□□ -0.42
DDX39B-215ENST00000462256 NLRP1Q9C000 1473 aa12.42□□□□□ -0.42
DDX39B-215ENST00000462256 ARXQ96QS3 562 aa12.42□□□□□ -0.42
DDX39B-215ENST00000462256 SLAIN2Q9P270 581 aa12.42□□□□□ -0.42
DDX39B-215ENST00000462256 CCDC61Q9Y6R9 512 aa12.42□□□□□ -0.42
DDX39B-215ENST00000462256 ARHGEF5Q12774 1597 aa12.42□□□□□ -0.42
DDX39B-215ENST00000462256 HSPA5P11021 654 aaKnown RBP12.41□□□□□ -0.42
DDX39B-215ENST00000462256 NPATQ14207 1427 aa12.41□□□□□ -0.42
DDX39B-215ENST00000462256 STRN4Q9NRL3 753 aa12.41□□□□□ -0.42
DDX39B-215ENST00000462256 U2SURPO15042 1029 aaKnown RBP12.41□□□□□ -0.42
DDX39B-215ENST00000462256 NBPF1Q3BBV0 1214 aa12.41□□□□□ -0.42
DDX39B-215ENST00000462256 NPHP3Q7Z494 1330 aa12.41□□□□□ -0.42
DDX39B-215ENST00000462256 LRRC59Q96AG4 307 aaKnown RBP12.4□□□□□ -0.42
DDX39B-215ENST00000462256 KDM5DQ9BY66 1539 aa12.4□□□□□ -0.42
DDX39B-215ENST00000462256 CC2D1BQ5T0F9 858 aaKnown RBP12.4□□□□□ -0.43
DDX39B-215ENST00000462256 ANO8Q9HCE9 1232 aaPredicted RBP12.4□□□□□ -0.43
DDX39B-215ENST00000462256 C14orf93Q9H972 538 aaKnown RBP12.39□□□□□ -0.43
DDX39B-215ENST00000462256 KRT28Q7Z3Y7 464 aa12.39□□□□□ -0.43
DDX39B-215ENST00000462256 NUDT16Q96DE0 195 aaKnown RBP12.39□□□□□ -0.43
DDX39B-215ENST00000462256 UGGT1Q9NYU2 1555 aa12.39□□□□□ -0.43
DDX39B-215ENST00000462256 ZNF692Q9BU19 519 aaPredicted RBP12.38□□□□□ -0.43
DDX39B-215ENST00000462256 ADGRL2O95490 1459 aa12.38□□□□□ -0.43
DDX39B-215ENST00000462256 ARHGEF40Q8TER5 1519 aa12.38□□□□□ -0.43
DDX39B-215ENST00000462256 NLRP2Q9NX02 1062 aa12.37□□□□□ -0.43
DDX39B-215ENST00000462256 TMEM94Q12767 1356 aa12.37□□□□□ -0.43
DDX39B-215ENST00000462256 DNMT1P26358 1616 aaKnown RBP12.37□□□□□ -0.43
DDX39B-215ENST00000462256 CABP1Q9NZU7 370 aa12.37□□□□□ -0.43
DDX39B-215ENST00000462256 C8orf37Q96NL8 207 aa12.36□□□□□ -0.43
DDX39B-215ENST00000462256 PZPP20742 1482 aa12.36□□□□□ -0.43
DDX39B-215ENST00000462256 SCAF11Q99590 1463 aaKnown RBP12.35□□□□□ -0.43
DDX39B-215ENST00000462256 ZC3H6P61129 1189 aaKnown RBP12.35□□□□□ -0.43
DDX39B-215ENST00000462256 WASLO00401 505 aaPredicted RBP12.35□□□□□ -0.43
DDX39B-215ENST00000462256 A2ML1A8K2U0 1454 aa12.35□□□□□ -0.43
DDX39B-215ENST00000462256 NPHP1O15259 732 aa12.34□□□□□ -0.43
DDX39B-215ENST00000462256 MAP3K4Q9Y6R4 1608 aa12.34□□□□□ -0.43
DDX39B-215ENST00000462256 DAXXQ9UER7 740 aaPredicted RBP12.34□□□□□ -0.43
DDX39B-215ENST00000462256 ERVK-7P63135 1459 aa12.34□□□□□ -0.43
DDX39B-215ENST00000462256 MAPK8IP3Q9UPT6 1336 aa12.34□□□□□ -0.43
DDX39B-215ENST00000462256 USP47Q96K76 1375 aa12.33□□□□□ -0.44
DDX39B-215ENST00000462256 CGNL1Q0VF96 1302 aa12.33□□□□□ -0.44
DDX39B-215ENST00000462256 RPRD2Q5VT52 1461 aaKnown RBP12.33□□□□□ -0.44
DDX39B-215ENST00000462256 CFAP65Q6ZU64 1925 aaKnown RBP12.33□□□□□ -0.44
DDX39B-215ENST00000462256 YTHDC1Q96MU7 727 aaKnown RBP12.33□□□□□ -0.44
DDX39B-215ENST00000462256 PDE3BQ13370 1112 aa12.33□□□□□ -0.44
DDX39B-215ENST00000462256 AGLP35573 1532 aa12.33□□□□□ -0.44
DDX39B-215ENST00000462256 TOM1L2Q6ZVM7 507 aa12.33□□□□□ -0.44
DDX39B-215ENST00000462256 CCDC136Q96JN2 1154 aa12.33□□□□□ -0.44
DDX39B-215ENST00000462256 RAPGEF4Q8WZA2 1011 aa12.32□□□□□ -0.44
DDX39B-215ENST00000462256 SYTL4Q96C24 671 aaPredicted RBP12.31□□□□□ -0.44
DDX39B-215ENST00000462256 EFCAB6Q5THR3 1501 aa12.31□□□□□ -0.44
DDX39B-215ENST00000462256 DIEXFQ68CQ4 756 aaKnown RBP12.31□□□□□ -0.44
DDX39B-215ENST00000462256 PNNQ9H307 717 aaKnown RBP12.31□□□□□ -0.44
DDX39B-215ENST00000462256 DIP2CQ9Y2E4 1556 aa12.31□□□□□ -0.44
DDX39B-215ENST00000462256 CDC42BPAQ5VT25 1732 aa12.3□□□□□ -0.44
DDX39B-215ENST00000462256 ATAD2Q6PL18 1390 aa12.3□□□□□ -0.44
DDX39B-215ENST00000462256 PLEKHG1Q9ULL1 1385 aa12.3□□□□□ -0.44
DDX39B-215ENST00000462256 ARHGAP31Q2M1Z3 1444 aa12.29□□□□□ -0.44
DDX39B-215ENST00000462256 RTF1Q92541 710 aaKnown RBP12.29□□□□□ -0.44
DDX39B-215ENST00000462256 SETD1BQ9UPS6 1966 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms