RNA–Protein interactions for RNA: ENST00000461636.1

THUMPD3-207, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-207ENST00000461636 RCCD1A6NED2 376 aa11.41□□□□□ -0.58
THUMPD3-207ENST00000461636 PCDHB3Q9Y5E6 796 aa11.41□□□□□ -0.58
THUMPD3-207ENST00000461636 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.4□□□□□ -0.58
THUMPD3-207ENST00000461636 GGCXP38435 758 aa11.4□□□□□ -0.58
THUMPD3-207ENST00000461636 PPP1R18Q6NYC8 613 aa11.4□□□□□ -0.58
THUMPD3-207ENST00000461636 OATP04181 439 aa11.39□□□□□ -0.59
THUMPD3-207ENST00000461636 FAM161AQ3B820 660 aa11.39□□□□□ -0.59
THUMPD3-207ENST00000461636 KMT5BQ4FZB7 885 aa11.39□□□□□ -0.59
THUMPD3-207ENST00000461636 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.38□□□□□ -0.59
THUMPD3-207ENST00000461636 RBM26Q5T8P6 1007 aaKnown RBP11.37□□□□□ -0.59
THUMPD3-207ENST00000461636 ZPR1O75312 459 aa11.36□□□□□ -0.59
THUMPD3-207ENST00000461636 LAPTM4AQ15012 233 aa11.36□□□□□ -0.59
THUMPD3-207ENST00000461636 PRKD2Q9BZL6 878 aa11.36□□□□□ -0.59
THUMPD3-207ENST00000461636 PXYLP1Q8TE99 480 aa11.35□□□□□ -0.59
THUMPD3-207ENST00000461636 GNPATO15228 680 aa11.34□□□□□ -0.59
THUMPD3-207ENST00000461636 CFHP08603 1231 aa11.34□□□□□ -0.59
THUMPD3-207ENST00000461636 NKX2-3Q8TAU0 364 aa11.34□□□□□ -0.59
THUMPD3-207ENST00000461636 ACTN4O43707 911 aaKnown RBP11.33□□□□□ -0.6
THUMPD3-207ENST00000461636 BLOC1S3Q6QNY0 202 aa11.33□□□□□ -0.6
THUMPD3-207ENST00000461636 Q6ZNB5 142 aa11.33□□□□□ -0.6
THUMPD3-207ENST00000461636 V9GY48 417 aaPredicted RBP11.33□□□□□ -0.6
THUMPD3-207ENST00000461636 RSPH4AQ5TD94 716 aa11.32□□□□□ -0.6
THUMPD3-207ENST00000461636 METTL3Q86U44 580 aaKnown RBP11.32□□□□□ -0.6
THUMPD3-207ENST00000461636 TMUB1Q9BVT8 246 aa11.32□□□□□ -0.6
THUMPD3-207ENST00000461636 GPR37O15354 613 aa11.27□□□□□ -0.61
THUMPD3-207ENST00000461636 SLC10A3P09131 477 aa11.27□□□□□ -0.61
THUMPD3-207ENST00000461636 GPIHBP1Q8IV16 184 aa11.27□□□□□ -0.61
THUMPD3-207ENST00000461636 TLL1O43897 1013 aa11.26□□□□□ -0.61
THUMPD3-207ENST00000461636 GFRA3O60609 400 aa11.26□□□□□ -0.61
THUMPD3-207ENST00000461636 NR1I2O75469 434 aa11.26□□□□□ -0.61
THUMPD3-207ENST00000461636 KDM2AQ9Y2K7 1162 aa11.26□□□□□ -0.61
THUMPD3-207ENST00000461636 TULP1O00294 542 aaPredicted RBP11.25□□□□□ -0.61
THUMPD3-207ENST00000461636 FECHP22830 423 aa11.25□□□□□ -0.61
THUMPD3-207ENST00000461636 NRG2O14511 850 aaPredicted RBP11.23□□□□□ -0.61
THUMPD3-207ENST00000461636 DAXXQ9UER7 740 aaPredicted RBP11.23□□□□□ -0.61
THUMPD3-207ENST00000461636 ABCC9O60706 1549 aa11.23□□□□□ -0.61
THUMPD3-207ENST00000461636 RNF223E7ERA6 249 aa11.22□□□□□ -0.61
THUMPD3-207ENST00000461636 ADH1BP00325 375 aa11.22□□□□□ -0.61
THUMPD3-207ENST00000461636 VSIG10Q8N0Z9 540 aa11.22□□□□□ -0.61
THUMPD3-207ENST00000461636 RDH13Q8NBN7 331 aa11.21□□□□□ -0.61
THUMPD3-207ENST00000461636 SULF1Q8IWU6 871 aa11.2□□□□□ -0.62
THUMPD3-207ENST00000461636 ANKLE1Q8NAG6 615 aa11.19□□□□□ -0.62
THUMPD3-207ENST00000461636 DDX11L8A8MPP1 907 aa11.18□□□□□ -0.62
THUMPD3-207ENST00000461636 S1PR4O95977 384 aa11.18□□□□□ -0.62
THUMPD3-207ENST00000461636 PDZRN3Q9UPQ7 1066 aa11.18□□□□□ -0.62
THUMPD3-207ENST00000461636 SLC19A1P41440 591 aa11.16□□□□□ -0.62
THUMPD3-207ENST00000461636 PUS10Q3MIT2 529 aaKnown RBP11.16□□□□□ -0.62
THUMPD3-207ENST00000461636 SCUBE3Q8IX30 993 aa11.16□□□□□ -0.62
THUMPD3-207ENST00000461636 SLC6A16Q9GZN6 736 aa11.16□□□□□ -0.62
THUMPD3-207ENST00000461636 NLRP7Q8WX94 980 aa11.15□□□□□ -0.62
THUMPD3-207ENST00000461636 TRAF7Q6Q0C0 670 aa11.14□□□□□ -0.63
THUMPD3-207ENST00000461636 SPSB2Q99619 263 aa11.13□□□□□ -0.63
THUMPD3-207ENST00000461636 PPEF1O14829 653 aaPredicted RBP11.12□□□□□ -0.63
THUMPD3-207ENST00000461636 ATP6V1AP38606 617 aa11.12□□□□□ -0.63
THUMPD3-207ENST00000461636 FUT2Q10981 343 aa11.12□□□□□ -0.63
THUMPD3-207ENST00000461636 MAP2K5Q13163 448 aa11.12□□□□□ -0.63
THUMPD3-207ENST00000461636 MORN1Q5T089 497 aa11.11□□□□□ -0.63
THUMPD3-207ENST00000461636 PHOX2BQ99453 314 aa11.11□□□□□ -0.63
THUMPD3-207ENST00000461636 GCGRP47871 477 aa11.1□□□□□ -0.63
THUMPD3-207ENST00000461636 SPRYD7Q5W111 196 aa11.1□□□□□ -0.63
THUMPD3-207ENST00000461636 ZNF598Q86UK7 904 aaKnown RBP11.09□□□□□ -0.63
THUMPD3-207ENST00000461636 GRIPAP1Q4V328 841 aa11.08□□□□□ -0.64
THUMPD3-207ENST00000461636 EMID1Q96A84 441 aaPredicted RBP11.08□□□□□ -0.64
THUMPD3-207ENST00000461636 FMNL1O95466 1100 aaPredicted RBP11.07□□□□□ -0.64
THUMPD3-207ENST00000461636 ZNF697Q5TEC3 545 aa11.06□□□□□ -0.64
THUMPD3-207ENST00000461636 LIAT1Q6ZQX7 453 aa11.06□□□□□ -0.64
THUMPD3-207ENST00000461636 LCE2BO14633 110 aa11.05□□□□□ -0.64
THUMPD3-207ENST00000461636 SLC27A5Q9Y2P5 690 aa11.05□□□□□ -0.64
THUMPD3-207ENST00000461636 SALL2Q9Y467 1007 aaPredicted RBP11.05□□□□□ -0.64
THUMPD3-207ENST00000461636 IRF6O14896 467 aa11.04□□□□□ -0.64
THUMPD3-207ENST00000461636 PRR20EP86478 221 aa11.04□□□□□ -0.64
THUMPD3-207ENST00000461636 PRR20CP86479 221 aa11.04□□□□□ -0.64
THUMPD3-207ENST00000461636 PRR20DP86480 221 aa11.04□□□□□ -0.64
THUMPD3-207ENST00000461636 PRR20BP86481 221 aa11.04□□□□□ -0.64
THUMPD3-207ENST00000461636 PRR20AP86496 221 aa11.04□□□□□ -0.64
THUMPD3-207ENST00000461636 THAP11Q96EK4 314 aa11.04□□□□□ -0.64
THUMPD3-207ENST00000461636 MINK1Q8N4C8 1332 aaPredicted RBP11.04□□□□□ -0.64
THUMPD3-207ENST00000461636 TRIM67Q6ZTA4 783 aa11.03□□□□□ -0.64
THUMPD3-207ENST00000461636 PKDCCQ504Y2 493 aa11.02□□□□□ -0.65
THUMPD3-207ENST00000461636 PLA2G2CQ5R387 149 aa11.02□□□□□ -0.65
THUMPD3-207ENST00000461636 CD46P15529 392 aa11.01□□□□□ -0.65
THUMPD3-207ENST00000461636 Q3C1V9 767 aa11□□□□□ -0.65
THUMPD3-207ENST00000461636 FCF1Q9Y324 198 aaKnown RBP11□□□□□ -0.65
THUMPD3-207ENST00000461636 MDM2Q00987 491 aaPredicted RBP10.99□□□□□ -0.65
THUMPD3-207ENST00000461636 CCDC102AQ96A19 550 aa10.99□□□□□ -0.65
THUMPD3-207ENST00000461636 KDM4AO75164 1064 aa10.98□□□□□ -0.65
THUMPD3-207ENST00000461636 RPIAP49247 311 aa10.98□□□□□ -0.65
THUMPD3-207ENST00000461636 MSS51Q4VC12 460 aa10.98□□□□□ -0.65
THUMPD3-207ENST00000461636 BRICD5Q6PL45 260 aa10.98□□□□□ -0.65
THUMPD3-207ENST00000461636 TNFRSF10AO00220 468 aa10.97□□□□□ -0.65
THUMPD3-207ENST00000461636 DGAT1O75907 488 aa10.97□□□□□ -0.65
THUMPD3-207ENST00000461636 LMOD2Q6P5Q4 547 aa10.97□□□□□ -0.65
THUMPD3-207ENST00000461636 FAM160A2Q8N612 972 aaPredicted RBP10.97□□□□□ -0.65
THUMPD3-207ENST00000461636 ZCCHC6Q5VYS8 1495 aaKnown RBP10.97□□□□□ -0.65
THUMPD3-207ENST00000461636 GDF9O60383 454 aa10.96□□□□□ -0.65
THUMPD3-207ENST00000461636 CLCN1P35523 988 aa10.96□□□□□ -0.65
THUMPD3-207ENST00000461636 USP46P62068 366 aa10.96□□□□□ -0.65
THUMPD3-207ENST00000461636 RNF19BQ6ZMZ0 732 aa10.96□□□□□ -0.65
THUMPD3-207ENST00000461636 PRDM9Q9NQV7 894 aa10.96□□□□□ -0.65
THUMPD3-207ENST00000461636 KRI1Q8N9T8 703 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms