RNA–Protein interactions for RNA: ENST00000461469.5

LMBR1-214, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-214ENST00000461469 SLC26A8Q96RN1 970 aa35.7■■■■□ 3.31
LMBR1-214ENST00000461469 CHGAP10645 457 aaKnown RBP35.68■■■■□ 3.3
LMBR1-214ENST00000461469 PLEKHG1Q9ULL1 1385 aa35.63■■■■□ 3.29
LMBR1-214ENST00000461469 NUTM2DQ5VT03 806 aaPredicted RBP35.62■■■■□ 3.29
LMBR1-214ENST00000461469 CLTCL1P53675 1640 aa35.61■■■■□ 3.29
LMBR1-214ENST00000461469 PIP4K2BP78356 416 aa35.6■■■■□ 3.29
LMBR1-214ENST00000461469 TOM1O60784 492 aa35.58■■■■□ 3.29
LMBR1-214ENST00000461469 NWD1Q149M9 1564 aa35.58■■■■□ 3.29
LMBR1-214ENST00000461469 TRPM2O94759 1503 aa35.56■■■■□ 3.28
LMBR1-214ENST00000461469 SCAF1Q9H7N4 1312 aaKnown RBP35.56■■■■□ 3.28
LMBR1-214ENST00000461469 PPP1R15AO75807 674 aaPredicted RBP35.55■■■■□ 3.28
LMBR1-214ENST00000461469 KCNA6P17658 529 aa35.55■■■■□ 3.28
LMBR1-214ENST00000461469 TRIM52Q96A61 297 aa35.55■■■■□ 3.28
LMBR1-214ENST00000461469 BCANQ96GW7 911 aa35.54■■■■□ 3.28
LMBR1-214ENST00000461469 CHD2O14647 1828 aaKnown RBP35.54■■■■□ 3.28
LMBR1-214ENST00000461469 ADAMTS13Q76LX8 1427 aa35.53■■■■□ 3.28
LMBR1-214ENST00000461469 RBM33Q96EV2 1170 aaKnown RBP35.51■■■■□ 3.28
LMBR1-214ENST00000461469 TMEM94Q12767 1356 aa35.5■■■■□ 3.27
LMBR1-214ENST00000461469 HSPA1LP34931 641 aa35.49■■■■□ 3.27
LMBR1-214ENST00000461469 HDGFP51858 240 aaKnown RBP35.49■■■■□ 3.27
LMBR1-214ENST00000461469 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.49■■■■□ 3.27
LMBR1-214ENST00000461469 NRXN3Q9Y4C0 1643 aa35.46■■■■□ 3.27
LMBR1-214ENST00000461469 NKTRP30414 1462 aaKnown RBP35.46■■■■□ 3.27
LMBR1-214ENST00000461469 KIF1BO60333 1816 aa35.44■■■■□ 3.26
LMBR1-214ENST00000461469 SLC4A1APQ9BWU0 796 aaKnown RBP35.44■■■■□ 3.26
LMBR1-214ENST00000461469 TBX22Q9Y458 520 aa35.44■■■■□ 3.26
LMBR1-214ENST00000461469 PROSER2Q86WR7 435 aaPredicted RBP35.42■■■■□ 3.26
LMBR1-214ENST00000461469 DIP2AQ14689 1571 aa35.42■■■■□ 3.26
LMBR1-214ENST00000461469 NEXMIFQ5QGS0 1516 aa35.42■■■■□ 3.26
LMBR1-214ENST00000461469 FOXD1Q16676 465 aa35.4■■■■□ 3.26
LMBR1-214ENST00000461469 ZNF326Q5BKZ1 582 aaKnown RBP35.37■■■■□ 3.25
LMBR1-214ENST00000461469 SETBP1Q9Y6X0 1596 aa35.37■■■■□ 3.25
LMBR1-214ENST00000461469 PTPRUQ92729 1446 aa35.35■■■■□ 3.25
LMBR1-214ENST00000461469 DISP3Q9P2K9 1392 aa35.35■■■■□ 3.25
LMBR1-214ENST00000461469 PIK3R4Q99570 1358 aa35.28■■■■□ 3.24
LMBR1-214ENST00000461469 MPHOSPH9Q99550 1183 aa35.28■■■■□ 3.24
LMBR1-214ENST00000461469 SETD5Q9C0A6 1442 aa35.28■■■■□ 3.24
LMBR1-214ENST00000461469 XRN1Q8IZH2 1706 aaKnown RBP35.26■■■■□ 3.24
LMBR1-214ENST00000461469 METP08581 1390 aa35.25■■■■□ 3.23
LMBR1-214ENST00000461469 PPLO60437 1756 aa35.24■■■■□ 3.23
LMBR1-214ENST00000461469 ROBO1Q9Y6N7 1651 aa35.23■■■■□ 3.23
LMBR1-214ENST00000461469 AMOTL2Q9Y2J4 779 aa35.22■■■■□ 3.23
LMBR1-214ENST00000461469 SETD1AO15047 1707 aaKnown RBP35.21■■■■□ 3.23
LMBR1-214ENST00000461469 ILDR2Q71H61 639 aa35.21■■■■□ 3.23
LMBR1-214ENST00000461469 MSH6P52701 1360 aa35.21■■■■□ 3.23
LMBR1-214ENST00000461469 FAM135BQ49AJ0 1406 aa35.21■■■■□ 3.23
LMBR1-214ENST00000461469 MED1Q15648 1581 aaPredicted RBP35.19■■■■□ 3.22
LMBR1-214ENST00000461469 RAB3GAP2Q9H2M9 1393 aa35.19■■■■□ 3.22
LMBR1-214ENST00000461469 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.18■■■■□ 3.22
LMBR1-214ENST00000461469 NCOA3Q9Y6Q9 1424 aa35.15■■■■□ 3.22
LMBR1-214ENST00000461469 CCDC144AA2RUR9 1427 aa35.14■■■■□ 3.22
LMBR1-214ENST00000461469 SPATA31E1Q6ZUB1 1445 aa35.14■■■■□ 3.22
LMBR1-214ENST00000461469 IFT172Q9UG01 1749 aa35.11■■■■□ 3.21
LMBR1-214ENST00000461469 RPGRIP1LQ68CZ1 1315 aa35.1■■■■□ 3.21
LMBR1-214ENST00000461469 SLAIN2Q9P270 581 aa35.1■■■■□ 3.21
LMBR1-214ENST00000461469 VGFO15240 615 aaPredicted RBP35.08■■■■□ 3.21
LMBR1-214ENST00000461469 C14orf37Q86TY3 774 aa35.07■■■■□ 3.2
LMBR1-214ENST00000461469 RGL3Q3MIN7 710 aa35.04■■■■□ 3.2
LMBR1-214ENST00000461469 C19orf44Q9H6X5 657 aa35.04■■■■□ 3.2
LMBR1-214ENST00000461469 ADGRF5Q8IZF2 1346 aa35.03■■■■□ 3.2
LMBR1-214ENST00000461469 NALCNQ8IZF0 1738 aa35.01■■■■□ 3.2
LMBR1-214ENST00000461469 PHLPP1O60346 1717 aa35■■■■□ 3.19
LMBR1-214ENST00000461469 ACIN1Q9UKV3 1341 aaKnown RBP34.98■■■■□ 3.19
LMBR1-214ENST00000461469 CADPS2Q86UW7 1296 aa34.96■■■■□ 3.19
LMBR1-214ENST00000461469 ATF3P18847 181 aa34.95■■■■□ 3.19
LMBR1-214ENST00000461469 ROBO2Q9HCK4 1378 aa34.95■■■■□ 3.19
LMBR1-214ENST00000461469 DCCP43146 1447 aa34.94■■■■□ 3.18
LMBR1-214ENST00000461469 COL16A1Q07092 1604 aaPredicted RBP34.93■■■■□ 3.18
LMBR1-214ENST00000461469 ADGRL3Q9HAR2 1447 aa34.93■■■■□ 3.18
LMBR1-214ENST00000461469 ASXL1Q8IXJ9 1541 aa34.92■■■■□ 3.18
LMBR1-214ENST00000461469 PTCH1Q13635 1447 aa34.92■■■■□ 3.18
LMBR1-214ENST00000461469 PRAG1Q86YV5 1406 aa34.92■■■■□ 3.18
LMBR1-214ENST00000461469 ANKRD30BQ9BXX2 1392 aa34.91■■■■□ 3.18
LMBR1-214ENST00000461469 MST1RQ04912 1400 aa34.9■■■■□ 3.18
LMBR1-214ENST00000461469 PIK3C2GO75747 1445 aa34.88■■■■□ 3.17
LMBR1-214ENST00000461469 AHDC1Q5TGY3 1603 aaPredicted RBP34.87■■■■□ 3.17
LMBR1-214ENST00000461469 BRINP3Q76B58 766 aa34.86■■■■□ 3.17
LMBR1-214ENST00000461469 HRCP23327 699 aa34.83■■■■□ 3.17
LMBR1-214ENST00000461469 NRXN1Q9ULB1 1477 aa34.82■■■■□ 3.16
LMBR1-214ENST00000461469 TMEM132EQ6IEE7 984 aa34.79■■■■□ 3.16
LMBR1-214ENST00000461469 MYOM2P54296 1465 aa34.78■■■■□ 3.16
LMBR1-214ENST00000461469 NHSL1Q5SYE7 1610 aa34.77■■■■□ 3.16
LMBR1-214ENST00000461469 PHF23Q9BUL5 403 aaPredicted RBP34.77■■■■□ 3.16
LMBR1-214ENST00000461469 RGS17Q9UGC6 210 aaPredicted RBP34.77■■■■□ 3.16
LMBR1-214ENST00000461469 KNDC1Q76NI1 1749 aa34.77■■■■□ 3.16
LMBR1-214ENST00000461469 JCADQ9P266 1359 aa34.75■■■■□ 3.15
LMBR1-214ENST00000461469 TECPR2O15040 1411 aa34.75■■■■□ 3.15
LMBR1-214ENST00000461469 STK26Q9P289 416 aa34.75■■■■□ 3.15
LMBR1-214ENST00000461469 LRPPRCP42704 1394 aaKnown RBP34.74■■■■□ 3.15
LMBR1-214ENST00000461469 C1orf167Q5SNV9 1468 aa34.73■■■■□ 3.15
LMBR1-214ENST00000461469 SOCS7O14512 581 aa34.73■■■■□ 3.15
LMBR1-214ENST00000461469 DDX17Q92841 729 aaKnown RBP34.72■■■■□ 3.15
LMBR1-214ENST00000461469 PLEKHH1Q9ULM0 1364 aa34.71■■■■□ 3.15
LMBR1-214ENST00000461469 SHPRHQ149N8 1683 aa34.7■■■■□ 3.15
LMBR1-214ENST00000461469 CFAP70Q5T0N1 1121 aa34.7■■■■□ 3.15
LMBR1-214ENST00000461469 WAPLQ7Z5K2 1190 aa34.7■■■■□ 3.15
LMBR1-214ENST00000461469 C14orf93Q9H972 538 aaKnown RBP34.7■■■■□ 3.15
LMBR1-214ENST00000461469 ABCC11Q96J66 1382 aa34.69■■■■□ 3.14
LMBR1-214ENST00000461469 YTHDC2Q9H6S0 1430 aaKnown RBP34.69■■■■□ 3.14
LMBR1-214ENST00000461469 LRP6O75581 1613 aa34.69■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms