RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 ARHGAP31Q2M1Z3 1444 aa15.23■□□□□ 0.03
IFT88-204ENST00000461115 CNTLNQ9NXG0 1405 aa15.23■□□□□ 0.03
IFT88-204ENST00000461115 C11orf95C9JLR9 678 aaPredicted RBP15.23■□□□□ 0.03
IFT88-204ENST00000461115 CAMSAP1Q5T5Y3 1602 aa15.22■□□□□ 0.03
IFT88-204ENST00000461115 RAPGEF3O95398 923 aa15.22■□□□□ 0.03
IFT88-204ENST00000461115 FAM69CQ0P6D2 419 aa15.22■□□□□ 0.03
IFT88-204ENST00000461115 AGLP35573 1532 aa15.22■□□□□ 0.03
IFT88-204ENST00000461115 TSPOAP1O95153 1857 aa15.2■□□□□ 0.02
IFT88-204ENST00000461115 NPATQ14207 1427 aa15.2■□□□□ 0.02
IFT88-204ENST00000461115 MYOM2P54296 1465 aa15.2■□□□□ 0.02
IFT88-204ENST00000461115 KIF7Q2M1P5 1343 aa15.2■□□□□ 0.02
IFT88-204ENST00000461115 YEATS2Q9ULM3 1422 aa15.19■□□□□ 0.02
IFT88-204ENST00000461115 MYT1LQ9UL68 1186 aa15.19■□□□□ 0.02
IFT88-204ENST00000461115 PIK3C2BO00750 1634 aa15.19■□□□□ 0.02
IFT88-204ENST00000461115 NOS1P29475 1434 aa15.19■□□□□ 0.02
IFT88-204ENST00000461115 ADGRB3O60242 1522 aa15.19■□□□□ 0.02
IFT88-204ENST00000461115 CARD11Q9BXL7 1154 aa15.18■□□□□ 0.02
IFT88-204ENST00000461115 IQGAP1P46940 1657 aa15.18■□□□□ 0.02
IFT88-204ENST00000461115 ROCK2O75116 1388 aaKnown RBP15.17■□□□□ 0.02
IFT88-204ENST00000461115 NRXN1Q9ULB1 1477 aa15.17■□□□□ 0.02
IFT88-204ENST00000461115 SIGLEC1Q9BZZ2 1709 aa15.17■□□□□ 0.02
IFT88-204ENST00000461115 MROH2AA6NES4 1674 aa15.16■□□□□ 0.02
IFT88-204ENST00000461115 ANP32CO43423 234 aa15.16■□□□□ 0.02
IFT88-204ENST00000461115 KDM2AQ9Y2K7 1162 aa15.16■□□□□ 0.02
IFT88-204ENST00000461115 PPLO60437 1756 aa15.14■□□□□ 0.01
IFT88-204ENST00000461115 RGL3Q3MIN7 710 aa15.14■□□□□ 0.01
IFT88-204ENST00000461115 ZNF326Q5BKZ1 582 aaKnown RBP15.14■□□□□ 0.01
IFT88-204ENST00000461115 UGGT1Q9NYU2 1555 aa15.14■□□□□ 0.01
IFT88-204ENST00000461115 CFAP65Q6ZU64 1925 aaKnown RBP15.12■□□□□ 0.01
IFT88-204ENST00000461115 AKT1S1Q96B36 256 aa15.12■□□□□ 0.01
IFT88-204ENST00000461115 SYNMO15061 1565 aa15.12■□□□□ 0.01
IFT88-204ENST00000461115 NBPF1Q3BBV0 1214 aa15.11■□□□□ 0.01
IFT88-204ENST00000461115 POTEHQ6S545 545 aa15.11■□□□□ 0.01
IFT88-204ENST00000461115 ARHGEF40Q8TER5 1519 aa15.11■□□□□ 0.01
IFT88-204ENST00000461115 ST20-MTHFSA0A0A6YYL1 179 aa15.1■□□□□ 0.01
IFT88-204ENST00000461115 WASHC2CQ9Y4E1 1318 aa15.1■□□□□ 0.01
IFT88-204ENST00000461115 COL17A1Q9UMD9 1497 aaPredicted RBP15.1■□□□□ 0.01
IFT88-204ENST00000461115 GGT6Q6P531 493 aa15.09■□□□□ 0.01
IFT88-204ENST00000461115 PREX1Q8TCU6 1659 aa15.09■□□□□ 0.01
IFT88-204ENST00000461115 SETBP1Q9Y6X0 1596 aa15.09■□□□□ 0.01
IFT88-204ENST00000461115 TESK2Q96S53 571 aa15.09■□□□□ 0.01
IFT88-204ENST00000461115 RPGRIP1LQ68CZ1 1315 aa15.08■□□□□ 0.01
IFT88-204ENST00000461115 SCAF11Q99590 1463 aaKnown RBP15.07■□□□□ 0
IFT88-204ENST00000461115 PRKRIP1Q9H875 184 aaPredicted RBP15.07■□□□□ 0
IFT88-204ENST00000461115 MYO3AQ8NEV4 1616 aa15.06■□□□□ 0
IFT88-204ENST00000461115 ZFYVE9O95405 1425 aa15.05■□□□□ -0
IFT88-204ENST00000461115 YTHDC1Q96MU7 727 aaKnown RBP15.04■□□□□ -0
IFT88-204ENST00000461115 PIK3C2GO75747 1445 aa15.03■□□□□ -0
IFT88-204ENST00000461115 SLC52A1Q9NWF4 448 aa15.03■□□□□ -0
IFT88-204ENST00000461115 NEXMIFQ5QGS0 1516 aa15.03■□□□□ -0
IFT88-204ENST00000461115 KTN1Q86UP2 1357 aaKnown RBP15.03■□□□□ -0
IFT88-204ENST00000461115 TMEM131LA2VDJ0 1609 aa15.02□□□□□ -0.01
IFT88-204ENST00000461115 SPATA31D1Q6ZQQ2 1576 aa15.02□□□□□ -0.01
IFT88-204ENST00000461115 SBNO2Q9Y2G9 1366 aa15.01□□□□□ -0.01
IFT88-204ENST00000461115 SLC24A1O60721 1099 aa15□□□□□ -0.01
IFT88-204ENST00000461115 ERVK-7P63135 1459 aa15□□□□□ -0.01
IFT88-204ENST00000461115 ADGRB1O14514 1584 aa15□□□□□ -0.01
IFT88-204ENST00000461115 ADGRF5Q8IZF2 1346 aa15□□□□□ -0.01
IFT88-204ENST00000461115 MYO5BQ9ULV0 1848 aa15□□□□□ -0.01
IFT88-204ENST00000461115 CLTCQ00610 1675 aaKnown RBP14.99□□□□□ -0.01
IFT88-204ENST00000461115 CHRDL2Q6WN34 429 aa14.99□□□□□ -0.01
IFT88-204ENST00000461115 EIF3AQ14152 1382 aaKnown RBP14.98□□□□□ -0.01
IFT88-204ENST00000461115 DISP3Q9P2K9 1392 aa14.98□□□□□ -0.01
IFT88-204ENST00000461115 SPDYE2BA6NHP3 402 aa14.98□□□□□ -0.01
IFT88-204ENST00000461115 SPDYE6P0CI01 402 aa14.98□□□□□ -0.01
IFT88-204ENST00000461115 SPDYE2Q495Y8 402 aa14.98□□□□□ -0.01
IFT88-204ENST00000461115 C14orf93Q9H972 538 aaKnown RBP14.98□□□□□ -0.01
IFT88-204ENST00000461115 PER1O15534 1290 aaPredicted RBP14.96□□□□□ -0.01
IFT88-204ENST00000461115 TMF1P82094 1093 aa14.96□□□□□ -0.01
IFT88-204ENST00000461115 IDI1Q13907 227 aa14.95□□□□□ -0.02
IFT88-204ENST00000461115 REM2Q8IYK8 340 aaPredicted RBP14.95□□□□□ -0.02
IFT88-204ENST00000461115 KDM5AP29375 1690 aaKnown RBP14.95□□□□□ -0.02
IFT88-204ENST00000461115 MYOM1P52179 1685 aa14.94□□□□□ -0.02
IFT88-204ENST00000461115 CFAP70Q5T0N1 1121 aa14.94□□□□□ -0.02
IFT88-204ENST00000461115 MKRN4PQ13434 485 aaPredicted RBP14.93□□□□□ -0.02
IFT88-204ENST00000461115 VGFO15240 615 aaPredicted RBP14.92□□□□□ -0.02
IFT88-204ENST00000461115 CDCA8Q53HL2 280 aa14.92□□□□□ -0.02
IFT88-204ENST00000461115 RALBP1Q15311 655 aa14.92□□□□□ -0.02
IFT88-204ENST00000461115 PARD3Q8TEW0 1356 aa14.91□□□□□ -0.02
IFT88-204ENST00000461115 ARHGEF28Q8N1W1 1705 aaKnown RBP14.9□□□□□ -0.02
IFT88-204ENST00000461115 GTF3C3Q9Y5Q9 886 aa14.9□□□□□ -0.02
IFT88-204ENST00000461115 CCDC184Q52MB2 194 aa14.89□□□□□ -0.03
IFT88-204ENST00000461115 ZNF692Q9BU19 519 aaPredicted RBP14.89□□□□□ -0.03
IFT88-204ENST00000461115 NPC1L1Q9UHC9 1359 aa14.88□□□□□ -0.03
IFT88-204ENST00000461115 BRD4O60885 1362 aaPredicted RBP14.88□□□□□ -0.03
IFT88-204ENST00000461115 QRICH2Q9H0J4 1663 aa14.87□□□□□ -0.03
IFT88-204ENST00000461115 A2ML1A8K2U0 1454 aa14.87□□□□□ -0.03
IFT88-204ENST00000461115 ASXL1Q8IXJ9 1541 aa14.87□□□□□ -0.03
IFT88-204ENST00000461115 PUS7Q96PZ0 661 aaKnown RBP14.87□□□□□ -0.03
IFT88-204ENST00000461115 CHGAP10645 457 aaKnown RBP14.86□□□□□ -0.03
IFT88-204ENST00000461115 FBXO31Q5XUX0 539 aaPredicted RBP14.86□□□□□ -0.03
IFT88-204ENST00000461115 SETD1AO15047 1707 aaKnown RBP14.86□□□□□ -0.03
IFT88-204ENST00000461115 MYBBP1AQ9BQG0 1328 aaKnown RBP14.85□□□□□ -0.03
IFT88-204ENST00000461115 ZMYM3Q14202 1370 aa14.85□□□□□ -0.03
IFT88-204ENST00000461115 MRS2Q9HD23 443 aa14.84□□□□□ -0.03
IFT88-204ENST00000461115 POLR3GLQ9BT43 218 aa14.83□□□□□ -0.03
IFT88-204ENST00000461115 CENPJQ9HC77 1338 aaPredicted RBP14.83□□□□□ -0.03
IFT88-204ENST00000461115 INSRP06213 1382 aa14.83□□□□□ -0.03
IFT88-204ENST00000461115 ALKQ9UM73 1620 aa14.83□□□□□ -0.04
IFT88-204ENST00000461115 LRPPRCP42704 1394 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms