RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 CHD2O14647 1828 aaKnown RBP18.77■□□□□ 0.59
HCFC1-204ENST00000461098 ZFYVE9O95405 1425 aa18.75■□□□□ 0.59
HCFC1-204ENST00000461098 LRP6O75581 1613 aa18.74■□□□□ 0.59
HCFC1-204ENST00000461098 LOC105371045A0A1W2PR82 267 aa18.74■□□□□ 0.59
HCFC1-204ENST00000461098 SLC52A1Q9NWF4 448 aa18.74■□□□□ 0.59
HCFC1-204ENST00000461098 CHIC2Q9UKJ5 165 aa18.73■□□□□ 0.59
HCFC1-204ENST00000461098 MYO5BQ9ULV0 1848 aa18.72■□□□□ 0.59
HCFC1-204ENST00000461098 PLEKHG1Q9ULL1 1385 aa18.72■□□□□ 0.59
HCFC1-204ENST00000461098 ANKRD30AQ9BXX3 1397 aa18.71■□□□□ 0.59
HCFC1-204ENST00000461098 FGD6Q6ZV73 1430 aa18.71■□□□□ 0.59
HCFC1-204ENST00000461098 UPF1Q92900 1129 aaKnown RBP eCLIP18.7■□□□□ 0.58
HCFC1-204ENST00000461098 NCOA3Q9Y6Q9 1424 aa18.69■□□□□ 0.58
HCFC1-204ENST00000461098 BCANQ96GW7 911 aa18.69■□□□□ 0.58
HCFC1-204ENST00000461098 TMEM131LA2VDJ0 1609 aa18.69■□□□□ 0.58
HCFC1-204ENST00000461098 RIMS2Q9UQ26 1411 aa18.68■□□□□ 0.58
HCFC1-204ENST00000461098 RPRD2Q5VT52 1461 aaKnown RBP18.68■□□□□ 0.58
HCFC1-204ENST00000461098 SPATA31A6Q5VVP1 1343 aa18.68■□□□□ 0.58
HCFC1-204ENST00000461098 GCC2Q8IWJ2 1684 aa18.67■□□□□ 0.58
HCFC1-204ENST00000461098 TBX22Q9Y458 520 aa18.67■□□□□ 0.58
HCFC1-204ENST00000461098 AHDC1Q5TGY3 1603 aaPredicted RBP18.67■□□□□ 0.58
HCFC1-204ENST00000461098 ADGRL2O95490 1459 aa18.66■□□□□ 0.58
HCFC1-204ENST00000461098 SHPRHQ149N8 1683 aa18.66■□□□□ 0.58
HCFC1-204ENST00000461098 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.66■□□□□ 0.58
HCFC1-204ENST00000461098 ADAMTS13Q76LX8 1427 aa18.66■□□□□ 0.58
HCFC1-204ENST00000461098 SRCAPQ6ZRS2 3230 aa18.65■□□□□ 0.58
HCFC1-204ENST00000461098 ZNF772Q68DY9 489 aaPredicted RBP18.63■□□□□ 0.57
HCFC1-204ENST00000461098 DIP2AQ14689 1571 aa18.63■□□□□ 0.57
HCFC1-204ENST00000461098 TRIM52Q96A61 297 aa18.62■□□□□ 0.57
HCFC1-204ENST00000461098 PPP1R15AO75807 674 aaPredicted RBP18.61■□□□□ 0.57
HCFC1-204ENST00000461098 C19orf44Q9H6X5 657 aa18.61■□□□□ 0.57
HCFC1-204ENST00000461098 ANKRD50Q9ULJ7 1429 aa18.6■□□□□ 0.57
HCFC1-204ENST00000461098 HDGFP51858 240 aaKnown RBP18.6■□□□□ 0.57
HCFC1-204ENST00000461098 MEX3CQ5U5Q3 659 aaKnown RBP18.6■□□□□ 0.57
HCFC1-204ENST00000461098 CADPS2Q86UW7 1296 aa18.6■□□□□ 0.57
HCFC1-204ENST00000461098 NUTM2DQ5VT03 806 aaPredicted RBP18.59■□□□□ 0.57
HCFC1-204ENST00000461098 PTPRUQ92729 1446 aa18.58■□□□□ 0.57
HCFC1-204ENST00000461098 PIK3R4Q99570 1358 aa18.58■□□□□ 0.57
HCFC1-204ENST00000461098 BRINP3Q76B58 766 aa18.58■□□□□ 0.56
HCFC1-204ENST00000461098 RXRBP28702 533 aa18.57■□□□□ 0.56
HCFC1-204ENST00000461098 C14orf37Q86TY3 774 aa18.57■□□□□ 0.56
HCFC1-204ENST00000461098 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.57■□□□□ 0.56
HCFC1-204ENST00000461098 CDK12Q9NYV4 1490 aaPredicted RBP18.57■□□□□ 0.56
HCFC1-204ENST00000461098 ATF3P18847 181 aa18.56■□□□□ 0.56
HCFC1-204ENST00000461098 E9PCH4 1651 aa18.56■□□□□ 0.56
HCFC1-204ENST00000461098 UNC13BO14795 1591 aa18.54■□□□□ 0.56
HCFC1-204ENST00000461098 CHGAP10645 457 aaKnown RBP18.53■□□□□ 0.56
HCFC1-204ENST00000461098 APLP2Q06481 763 aa18.53■□□□□ 0.56
HCFC1-204ENST00000461098 AMOTL2Q9Y2J4 779 aa18.53■□□□□ 0.56
HCFC1-204ENST00000461098 SETD5Q9C0A6 1442 aa18.52■□□□□ 0.56
HCFC1-204ENST00000461098 NUTM2BA6NNL0 878 aaPredicted RBP18.52■□□□□ 0.56
HCFC1-204ENST00000461098 NUTM2EB1AL46 878 aaPredicted RBP18.52■□□□□ 0.56
HCFC1-204ENST00000461098 NUTM2AQ8IVF1 878 aaPredicted RBP18.52■□□□□ 0.56
HCFC1-204ENST00000461098 TRPM2O94759 1503 aa18.52■□□□□ 0.56
HCFC1-204ENST00000461098 ASXL1Q8IXJ9 1541 aa18.52■□□□□ 0.56
HCFC1-204ENST00000461098 DCCP43146 1447 aa18.51■□□□□ 0.55
HCFC1-204ENST00000461098 AFF2P51816 1311 aa18.5■□□□□ 0.55
HCFC1-204ENST00000461098 NHSL1Q5SYE7 1610 aa18.5■□□□□ 0.55
HCFC1-204ENST00000461098 NRXN3Q9Y4C0 1643 aa18.5■□□□□ 0.55
HCFC1-204ENST00000461098 MST1RQ04912 1400 aa18.49■□□□□ 0.55
HCFC1-204ENST00000461098 XRN1Q8IZH2 1706 aaKnown RBP18.49■□□□□ 0.55
HCFC1-204ENST00000461098 FAM50AQ14320 339 aaKnown RBP18.48■□□□□ 0.55
HCFC1-204ENST00000461098 RGS12O14924 1447 aa18.48■□□□□ 0.55
HCFC1-204ENST00000461098 IQGAP3Q86VI3 1631 aa18.47■□□□□ 0.55
HCFC1-204ENST00000461098 DDX17Q92841 729 aaKnown RBP18.45■□□□□ 0.54
HCFC1-204ENST00000461098 SETBP1Q9Y6X0 1596 aa18.45■□□□□ 0.54
HCFC1-204ENST00000461098 LRRC59Q96AG4 307 aaKnown RBP18.44■□□□□ 0.54
HCFC1-204ENST00000461098 METP08581 1390 aa18.43■□□□□ 0.54
HCFC1-204ENST00000461098 PNPLA6Q8IY17 1366 aa18.43■□□□□ 0.54
HCFC1-204ENST00000461098 QTRT2Q9H974 415 aaKnown RBP18.43■□□□□ 0.54
HCFC1-204ENST00000461098 RBM6P78332 1123 aaKnown RBP18.42■□□□□ 0.54
HCFC1-204ENST00000461098 C8orf37Q96NL8 207 aa18.42■□□□□ 0.54
HCFC1-204ENST00000461098 EP400Q96L91 3159 aa18.41■□□□□ 0.54
HCFC1-204ENST00000461098 ROCK1Q13464 1354 aa18.4■□□□□ 0.54
HCFC1-204ENST00000461098 NALCNQ8IZF0 1738 aa18.39■□□□□ 0.53
HCFC1-204ENST00000461098 ADGRL3Q9HAR2 1447 aa18.39■□□□□ 0.53
HCFC1-204ENST00000461098 NUP155O75694 1391 aa18.38■□□□□ 0.53
HCFC1-204ENST00000461098 LAMC1P11047 1609 aa18.38■□□□□ 0.53
HCFC1-204ENST00000461098 C1orf167Q5SNV9 1468 aa18.35■□□□□ 0.53
HCFC1-204ENST00000461098 SPHKAPQ2M3C7 1700 aa18.34■□□□□ 0.53
HCFC1-204ENST00000461098 ADAMTS2O95450 1211 aa18.33■□□□□ 0.52
HCFC1-204ENST00000461098 NGLY1Q96IV0 654 aa18.33■□□□□ 0.52
HCFC1-204ENST00000461098 NEXMIFQ5QGS0 1516 aa18.33■□□□□ 0.52
HCFC1-204ENST00000461098 SOS2Q07890 1332 aaPredicted RBP18.32■□□□□ 0.52
HCFC1-204ENST00000461098 ZNF326Q5BKZ1 582 aaKnown RBP18.3■□□□□ 0.52
HCFC1-204ENST00000461098 FNBP4Q8N3X1 1017 aaPredicted RBP18.3■□□□□ 0.52
HCFC1-204ENST00000461098 ORAI2Q96SN7 254 aa18.3■□□□□ 0.52
HCFC1-204ENST00000461098 ATAD2Q6PL18 1390 aa18.3■□□□□ 0.52
HCFC1-204ENST00000461098 USP21Q9UK80 565 aa18.29■□□□□ 0.52
HCFC1-204ENST00000461098 CLTCL1P53675 1640 aa18.28■□□□□ 0.52
HCFC1-204ENST00000461098 ATRNO75882 1429 aa18.28■□□□□ 0.52
HCFC1-204ENST00000461098 COL22A1Q8NFW1 1626 aaPredicted RBP18.27■□□□□ 0.52
HCFC1-204ENST00000461098 PTCH1Q13635 1447 aa18.27■□□□□ 0.52
HCFC1-204ENST00000461098 TRPC5Q9UL62 973 aaPredicted RBP18.27■□□□□ 0.52
HCFC1-204ENST00000461098 ROBO2Q9HCK4 1378 aa18.27■□□□□ 0.51
HCFC1-204ENST00000461098 PRAG1Q86YV5 1406 aa18.24■□□□□ 0.51
HCFC1-204ENST00000461098 MYOM2P54296 1465 aa18.23■□□□□ 0.51
HCFC1-204ENST00000461098 BCL9LQ86UU0 1499 aa18.23■□□□□ 0.51
HCFC1-204ENST00000461098 ITGAEP38570 1179 aa18.21■□□□□ 0.51
HCFC1-204ENST00000461098 ZRANB1Q9UGI0 708 aa18.21■□□□□ 0.51
HCFC1-204ENST00000461098 KIF1BO60333 1816 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms