RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 HIC1Q14526 733 aa9.47□□□□□ -0.89
ATPAF1-203ENST00000460928 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.46□□□□□ -0.9
ATPAF1-203ENST00000460928 PPP1R18Q6NYC8 613 aa9.46□□□□□ -0.9
ATPAF1-203ENST00000460928 OATP04181 439 aa9.45□□□□□ -0.9
ATPAF1-203ENST00000460928 Q6ZNB5 142 aa9.45□□□□□ -0.9
ATPAF1-203ENST00000460928 ZPR1O75312 459 aa9.44□□□□□ -0.9
ATPAF1-203ENST00000460928 COPS2P61201 443 aa9.44□□□□□ -0.9
ATPAF1-203ENST00000460928 LAPTM4AQ15012 233 aa9.44□□□□□ -0.9
ATPAF1-203ENST00000460928 FAM161AQ3B820 660 aa9.44□□□□□ -0.9
ATPAF1-203ENST00000460928 VSIG10Q8N0Z9 540 aa9.44□□□□□ -0.9
ATPAF1-203ENST00000460928 PXYLP1Q8TE99 480 aa9.44□□□□□ -0.9
ATPAF1-203ENST00000460928 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.44□□□□□ -0.9
ATPAF1-203ENST00000460928 PCDHB3Q9Y5E6 796 aa9.44□□□□□ -0.9
ATPAF1-203ENST00000460928 RBM26Q5T8P6 1007 aaKnown RBP9.43□□□□□ -0.9
ATPAF1-203ENST00000460928 V9GY48 417 aaPredicted RBP9.43□□□□□ -0.9
ATPAF1-203ENST00000460928 NKX2-3Q8TAU0 364 aa9.42□□□□□ -0.9
ATPAF1-203ENST00000460928 TMUB1Q9BVT8 246 aa9.42□□□□□ -0.9
ATPAF1-203ENST00000460928 GPR37O15354 613 aa9.41□□□□□ -0.9
ATPAF1-203ENST00000460928 ACTN4O43707 911 aaKnown RBP9.41□□□□□ -0.9
ATPAF1-203ENST00000460928 GGCXP38435 758 aa9.41□□□□□ -0.9
ATPAF1-203ENST00000460928 KMT5BQ4FZB7 885 aa9.41□□□□□ -0.9
ATPAF1-203ENST00000460928 METTL3Q86U44 580 aaKnown RBP9.41□□□□□ -0.9
ATPAF1-203ENST00000460928 PRKD2Q9BZL6 878 aa9.41□□□□□ -0.9
ATPAF1-203ENST00000460928 GNPATO15228 680 aa9.4□□□□□ -0.9
ATPAF1-203ENST00000460928 BLOC1S3Q6QNY0 202 aa9.4□□□□□ -0.9
ATPAF1-203ENST00000460928 CFHP08603 1231 aa9.39□□□□□ -0.91
ATPAF1-203ENST00000460928 SLC10A3P09131 477 aa9.39□□□□□ -0.91
ATPAF1-203ENST00000460928 BCANQ96GW7 911 aa9.39□□□□□ -0.91
ATPAF1-203ENST00000460928 KDM2AQ9Y2K7 1162 aa9.39□□□□□ -0.91
ATPAF1-203ENST00000460928 GFRA3O60609 400 aa9.36□□□□□ -0.91
ATPAF1-203ENST00000460928 FECHP22830 423 aa9.36□□□□□ -0.91
ATPAF1-203ENST00000460928 RSPH4AQ5TD94 716 aa9.35□□□□□ -0.91
ATPAF1-203ENST00000460928 TLL1O43897 1013 aa9.32□□□□□ -0.92
ATPAF1-203ENST00000460928 NR1I2O75469 434 aa9.32□□□□□ -0.92
ATPAF1-203ENST00000460928 GPIHBP1Q8IV16 184 aa9.32□□□□□ -0.92
ATPAF1-203ENST00000460928 DAXXQ9UER7 740 aaPredicted RBP9.32□□□□□ -0.92
ATPAF1-203ENST00000460928 RNF223E7ERA6 249 aa9.31□□□□□ -0.92
ATPAF1-203ENST00000460928 NRG2O14511 850 aaPredicted RBP9.31□□□□□ -0.92
ATPAF1-203ENST00000460928 TRAF7Q6Q0C0 670 aa9.31□□□□□ -0.92
ATPAF1-203ENST00000460928 LCE2BO14633 110 aa9.3□□□□□ -0.92
ATPAF1-203ENST00000460928 ADH1BP00325 375 aa9.3□□□□□ -0.92
ATPAF1-203ENST00000460928 ANKLE1Q8NAG6 615 aa9.3□□□□□ -0.92
ATPAF1-203ENST00000460928 S1PR4O95977 384 aa9.27□□□□□ -0.93
ATPAF1-203ENST00000460928 SCUBE3Q8IX30 993 aa9.27□□□□□ -0.93
ATPAF1-203ENST00000460928 EMID1Q96A84 441 aaPredicted RBP9.27□□□□□ -0.93
ATPAF1-203ENST00000460928 PHOX2BQ99453 314 aa9.27□□□□□ -0.93
ATPAF1-203ENST00000460928 SLC19A1P41440 591 aa9.26□□□□□ -0.93
ATPAF1-203ENST00000460928 SULF1Q8IWU6 871 aa9.26□□□□□ -0.93
ATPAF1-203ENST00000460928 RDH13Q8NBN7 331 aa9.25□□□□□ -0.93
ATPAF1-203ENST00000460928 PDZRN3Q9UPQ7 1066 aa9.25□□□□□ -0.93
ATPAF1-203ENST00000460928 DDX11L8A8MPP1 907 aa9.24□□□□□ -0.93
ATPAF1-203ENST00000460928 TULP1O00294 542 aaPredicted RBP9.24□□□□□ -0.93
ATPAF1-203ENST00000460928 PRKCSHP14314 528 aaPredicted RBP9.24□□□□□ -0.93
ATPAF1-203ENST00000460928 PUS10Q3MIT2 529 aaKnown RBP9.24□□□□□ -0.93
ATPAF1-203ENST00000460928 SLC6A16Q9GZN6 736 aa9.24□□□□□ -0.93
ATPAF1-203ENST00000460928 GCGRP47871 477 aa9.23□□□□□ -0.93
ATPAF1-203ENST00000460928 MAP2K5Q13163 448 aa9.23□□□□□ -0.93
ATPAF1-203ENST00000460928 MORN1Q5T089 497 aa9.23□□□□□ -0.93
ATPAF1-203ENST00000460928 NLRP7Q8WX94 980 aa9.23□□□□□ -0.93
ATPAF1-203ENST00000460928 ATP6V1AP38606 617 aa9.22□□□□□ -0.93
ATPAF1-203ENST00000460928 FUT2Q10981 343 aa9.22□□□□□ -0.93
ATPAF1-203ENST00000460928 SPRYD7Q5W111 196 aa9.22□□□□□ -0.93
ATPAF1-203ENST00000460928 SPSB2Q99619 263 aa9.22□□□□□ -0.93
ATPAF1-203ENST00000460928 PPEF1O14829 653 aaPredicted RBP9.21□□□□□ -0.94
ATPAF1-203ENST00000460928 TRIM67Q6ZTA4 783 aa9.21□□□□□ -0.94
ATPAF1-203ENST00000460928 ZNF598Q86UK7 904 aaKnown RBP9.21□□□□□ -0.94
ATPAF1-203ENST00000460928 LIAT1Q6ZQX7 453 aa9.2□□□□□ -0.94
ATPAF1-203ENST00000460928 THAP11Q96EK4 314 aa9.2□□□□□ -0.94
ATPAF1-203ENST00000460928 SALL2Q9Y467 1007 aaPredicted RBP9.2□□□□□ -0.94
ATPAF1-203ENST00000460928 PRR20EP86478 221 aa9.19□□□□□ -0.94
ATPAF1-203ENST00000460928 PRR20CP86479 221 aa9.19□□□□□ -0.94
ATPAF1-203ENST00000460928 PRR20DP86480 221 aa9.19□□□□□ -0.94
ATPAF1-203ENST00000460928 PRR20BP86481 221 aa9.19□□□□□ -0.94
ATPAF1-203ENST00000460928 PRR20AP86496 221 aa9.19□□□□□ -0.94
ATPAF1-203ENST00000460928 IRF6O14896 467 aa9.18□□□□□ -0.94
ATPAF1-203ENST00000460928 MINK1Q8N4C8 1332 aaPredicted RBP9.18□□□□□ -0.94
ATPAF1-203ENST00000460928 PLA2G2CQ5R387 149 aa9.17□□□□□ -0.94
ATPAF1-203ENST00000460928 SLC27A5Q9Y2P5 690 aa9.17□□□□□ -0.94
ATPAF1-203ENST00000460928 ZCCHC6Q5VYS8 1495 aaKnown RBP9.16□□□□□ -0.94
ATPAF1-203ENST00000460928 FMNL1O95466 1100 aaPredicted RBP9.16□□□□□ -0.94
ATPAF1-203ENST00000460928 CD46P15529 392 aa9.16□□□□□ -0.94
ATPAF1-203ENST00000460928 GRIPAP1Q4V328 841 aa9.16□□□□□ -0.94
ATPAF1-203ENST00000460928 ZNF697Q5TEC3 545 aa9.16□□□□□ -0.94
ATPAF1-203ENST00000460928 BRICD5Q6PL45 260 aa9.14□□□□□ -0.95
ATPAF1-203ENST00000460928 FAM160A2Q8N612 972 aaPredicted RBP9.14□□□□□ -0.95
ATPAF1-203ENST00000460928 GDF9O60383 454 aa9.13□□□□□ -0.95
ATPAF1-203ENST00000460928 RPIAP49247 311 aa9.13□□□□□ -0.95
ATPAF1-203ENST00000460928 MSS51Q4VC12 460 aa9.13□□□□□ -0.95
ATPAF1-203ENST00000460928 TPRNQ4KMQ1 711 aa9.12□□□□□ -0.95
ATPAF1-203ENST00000460928 LMOD2Q6P5Q4 547 aa9.12□□□□□ -0.95
ATPAF1-203ENST00000460928 DGAT1O75907 488 aa9.11□□□□□ -0.95
ATPAF1-203ENST00000460928 Q3C1V9 767 aa9.11□□□□□ -0.95
ATPAF1-203ENST00000460928 ZNF787Q6DD87 383 aa9.11□□□□□ -0.95
ATPAF1-203ENST00000460928 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.11□□□□□ -0.95
ATPAF1-203ENST00000460928 CCDC102AQ96A19 550 aa9.11□□□□□ -0.95
ATPAF1-203ENST00000460928 FCF1Q9Y324 198 aaKnown RBP9.11□□□□□ -0.95
ATPAF1-203ENST00000460928 MDM2Q00987 491 aaPredicted RBP9.1□□□□□ -0.95
ATPAF1-203ENST00000460928 KDM4AO75164 1064 aa9.09□□□□□ -0.95
ATPAF1-203ENST00000460928 USP46P62068 366 aa9.09□□□□□ -0.95
ATPAF1-203ENST00000460928 PKDCCQ504Y2 493 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms