RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 TRPM2O94759 1503 aa24.82■■□□□ 1.56
SHANK2-213ENST00000460048 CLTCL1P53675 1640 aa24.82■■□□□ 1.56
SHANK2-213ENST00000460048 HDGFP51858 240 aaKnown RBP24.81■■□□□ 1.56
SHANK2-213ENST00000460048 ALKQ9UM73 1620 aa24.8■■□□□ 1.56
SHANK2-213ENST00000460048 TRIM52Q96A61 297 aa24.8■■□□□ 1.56
SHANK2-213ENST00000460048 SLC26A8Q96RN1 970 aa24.8■■□□□ 1.56
SHANK2-213ENST00000460048 KIF1BO60333 1816 aa24.79■■□□□ 1.56
SHANK2-213ENST00000460048 NWD1Q149M9 1564 aa24.79■■□□□ 1.56
SHANK2-213ENST00000460048 CHD2O14647 1828 aaKnown RBP24.79■■□□□ 1.56
SHANK2-213ENST00000460048 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.78■■□□□ 1.56
SHANK2-213ENST00000460048 TOM1O60784 492 aa24.76■■□□□ 1.55
SHANK2-213ENST00000460048 PPP1R15AO75807 674 aaPredicted RBP24.76■■□□□ 1.55
SHANK2-213ENST00000460048 KCNA6P17658 529 aa24.75■■□□□ 1.55
SHANK2-213ENST00000460048 SLC4A1APQ9BWU0 796 aaKnown RBP24.74■■□□□ 1.55
SHANK2-213ENST00000460048 DIP2AQ14689 1571 aa24.73■■□□□ 1.55
SHANK2-213ENST00000460048 BCANQ96GW7 911 aa24.73■■□□□ 1.55
SHANK2-213ENST00000460048 ADAMTS13Q76LX8 1427 aa24.72■■□□□ 1.55
SHANK2-213ENST00000460048 NUTM2DQ5VT03 806 aaPredicted RBP24.72■■□□□ 1.55
SHANK2-213ENST00000460048 NKTRP30414 1462 aaKnown RBP24.71■■□□□ 1.55
SHANK2-213ENST00000460048 SENP3Q9H4L4 574 aaPredicted RBP24.71■■□□□ 1.55
SHANK2-213ENST00000460048 TBX22Q9Y458 520 aa24.71■■□□□ 1.55
SHANK2-213ENST00000460048 NRXN3Q9Y4C0 1643 aa24.69■■□□□ 1.54
SHANK2-213ENST00000460048 NEXMIFQ5QGS0 1516 aa24.69■■□□□ 1.54
SHANK2-213ENST00000460048 PIP4K2BP78356 416 aa24.68■■□□□ 1.54
SHANK2-213ENST00000460048 SETD5Q9C0A6 1442 aa24.67■■□□□ 1.54
SHANK2-213ENST00000460048 SETBP1Q9Y6X0 1596 aa24.67■■□□□ 1.54
SHANK2-213ENST00000460048 TMEM94Q12767 1356 aa24.67■■□□□ 1.54
SHANK2-213ENST00000460048 ZNF326Q5BKZ1 582 aaKnown RBP24.65■■□□□ 1.54
SHANK2-213ENST00000460048 SCAF1Q9H7N4 1312 aaKnown RBP24.64■■□□□ 1.54
SHANK2-213ENST00000460048 PROSER2Q86WR7 435 aaPredicted RBP24.64■■□□□ 1.54
SHANK2-213ENST00000460048 PIK3R4Q99570 1358 aa24.64■■□□□ 1.53
SHANK2-213ENST00000460048 MPHOSPH9Q99550 1183 aa24.63■■□□□ 1.53
SHANK2-213ENST00000460048 ACIN1Q9UKV3 1341 aaKnown RBP24.62■■□□□ 1.53
SHANK2-213ENST00000460048 FOXD1Q16676 465 aa24.62■■□□□ 1.53
SHANK2-213ENST00000460048 PPLO60437 1756 aa24.6■■□□□ 1.53
SHANK2-213ENST00000460048 HSPA1LP34931 641 aa24.59■■□□□ 1.53
SHANK2-213ENST00000460048 RBM33Q96EV2 1170 aaKnown RBP24.59■■□□□ 1.53
SHANK2-213ENST00000460048 PTPRUQ92729 1446 aa24.58■■□□□ 1.53
SHANK2-213ENST00000460048 RAB3GAP2Q9H2M9 1393 aa24.57■■□□□ 1.52
SHANK2-213ENST00000460048 XRN1Q8IZH2 1706 aaKnown RBP24.57■■□□□ 1.52
SHANK2-213ENST00000460048 NCOA3Q9Y6Q9 1424 aa24.55■■□□□ 1.52
SHANK2-213ENST00000460048 SETD1AO15047 1707 aaKnown RBP24.55■■□□□ 1.52
SHANK2-213ENST00000460048 RPGRIP1LQ68CZ1 1315 aa24.54■■□□□ 1.52
SHANK2-213ENST00000460048 CCDC144AA2RUR9 1427 aa24.53■■□□□ 1.52
SHANK2-213ENST00000460048 IFT172Q9UG01 1749 aa24.52■■□□□ 1.52
SHANK2-213ENST00000460048 AMOTL2Q9Y2J4 779 aa24.52■■□□□ 1.52
SHANK2-213ENST00000460048 MSH6P52701 1360 aa24.52■■□□□ 1.52
SHANK2-213ENST00000460048 METP08581 1390 aa24.51■■□□□ 1.51
SHANK2-213ENST00000460048 FAM135BQ49AJ0 1406 aa24.51■■□□□ 1.51
SHANK2-213ENST00000460048 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.5■■□□□ 1.51
SHANK2-213ENST00000460048 VGFO15240 615 aaPredicted RBP24.5■■□□□ 1.51
SHANK2-213ENST00000460048 SPATA31E1Q6ZUB1 1445 aa24.5■■□□□ 1.51
SHANK2-213ENST00000460048 ROBO1Q9Y6N7 1651 aa24.5■■□□□ 1.51
SHANK2-213ENST00000460048 DISP3Q9P2K9 1392 aa24.46■■□□□ 1.51
SHANK2-213ENST00000460048 HRCP23327 699 aa24.44■■□□□ 1.5
SHANK2-213ENST00000460048 C19orf44Q9H6X5 657 aa24.41■■□□□ 1.5
SHANK2-213ENST00000460048 SLAIN2Q9P270 581 aa24.41■■□□□ 1.5
SHANK2-213ENST00000460048 RGL3Q3MIN7 710 aa24.4■■□□□ 1.5
SHANK2-213ENST00000460048 MED1Q15648 1581 aaPredicted RBP24.4■■□□□ 1.5
SHANK2-213ENST00000460048 C14orf37Q86TY3 774 aa24.39■■□□□ 1.49
SHANK2-213ENST00000460048 ANKRD30BQ9BXX2 1392 aa24.39■■□□□ 1.49
SHANK2-213ENST00000460048 ADGRF5Q8IZF2 1346 aa24.38■■□□□ 1.49
SHANK2-213ENST00000460048 PRAG1Q86YV5 1406 aa24.38■■□□□ 1.49
SHANK2-213ENST00000460048 NALCNQ8IZF0 1738 aa24.38■■□□□ 1.49
SHANK2-213ENST00000460048 DCCP43146 1447 aa24.37■■□□□ 1.49
SHANK2-213ENST00000460048 CADPS2Q86UW7 1296 aa24.36■■□□□ 1.49
SHANK2-213ENST00000460048 PTCH1Q13635 1447 aa24.35■■□□□ 1.49
SHANK2-213ENST00000460048 PHLPP1O60346 1717 aa24.35■■□□□ 1.49
SHANK2-213ENST00000460048 ATF3P18847 181 aa24.34■■□□□ 1.49
SHANK2-213ENST00000460048 ILDR2Q71H61 639 aa24.34■■□□□ 1.49
SHANK2-213ENST00000460048 PIK3C2GO75747 1445 aa24.33■■□□□ 1.49
SHANK2-213ENST00000460048 ADGRL3Q9HAR2 1447 aa24.33■■□□□ 1.49
SHANK2-213ENST00000460048 ROBO2Q9HCK4 1378 aa24.3■■□□□ 1.48
SHANK2-213ENST00000460048 MYOM2P54296 1465 aa24.3■■□□□ 1.48
SHANK2-213ENST00000460048 NRXN1Q9ULB1 1477 aa24.3■■□□□ 1.48
SHANK2-213ENST00000460048 ASXL1Q8IXJ9 1541 aa24.3■■□□□ 1.48
SHANK2-213ENST00000460048 KNDC1Q76NI1 1749 aa24.29■■□□□ 1.48
SHANK2-213ENST00000460048 COL16A1Q07092 1604 aaPredicted RBP24.28■■□□□ 1.48
SHANK2-213ENST00000460048 AHDC1Q5TGY3 1603 aaPredicted RBP24.28■■□□□ 1.48
SHANK2-213ENST00000460048 MST1RQ04912 1400 aa24.27■■□□□ 1.48
SHANK2-213ENST00000460048 LAMC1P11047 1609 aa24.26■■□□□ 1.47
SHANK2-213ENST00000460048 TECPR2O15040 1411 aa24.24■■□□□ 1.47
SHANK2-213ENST00000460048 BRINP3Q76B58 766 aa24.23■■□□□ 1.47
SHANK2-213ENST00000460048 LRPPRCP42704 1394 aaKnown RBP24.23■■□□□ 1.47
SHANK2-213ENST00000460048 NHSL1Q5SYE7 1610 aa24.22■■□□□ 1.47
SHANK2-213ENST00000460048 C14orf93Q9H972 538 aaKnown RBP24.21■■□□□ 1.47
SHANK2-213ENST00000460048 ABCC11Q96J66 1382 aa24.2■■□□□ 1.46
SHANK2-213ENST00000460048 TMEM132EQ6IEE7 984 aa24.2■■□□□ 1.46
SHANK2-213ENST00000460048 YTHDC2Q9H6S0 1430 aaKnown RBP24.18■■□□□ 1.46
SHANK2-213ENST00000460048 SHPRHQ149N8 1683 aa24.18■■□□□ 1.46
SHANK2-213ENST00000460048 JCADQ9P266 1359 aa24.17■■□□□ 1.46
SHANK2-213ENST00000460048 CDC42BPGQ6DT37 1551 aa24.17■■□□□ 1.46
SHANK2-213ENST00000460048 STK26Q9P289 416 aa24.17■■□□□ 1.46
SHANK2-213ENST00000460048 C1orf167Q5SNV9 1468 aa24.17■■□□□ 1.46
SHANK2-213ENST00000460048 SOCS7O14512 581 aa24.16■■□□□ 1.46
SHANK2-213ENST00000460048 CFAP70Q5T0N1 1121 aa24.16■■□□□ 1.46
SHANK2-213ENST00000460048 WAPLQ7Z5K2 1190 aa24.13■■□□□ 1.45
SHANK2-213ENST00000460048 PHF23Q9BUL5 403 aaPredicted RBP24.13■■□□□ 1.45
SHANK2-213ENST00000460048 DHX57Q6P158 1386 aaKnown RBP24.13■■□□□ 1.45
SHANK2-213ENST00000460048 SIRT1Q96EB6 747 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms