RNA–Protein interactions for RNA: ENST00000458294.5

PBRM1-218, Transcript of polybromo 1, human

TSL 3

Gene PBRM1, Length 476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PBRM1-218	ENST00000458294	GCC2	Q8IWJ2	1684 aa		40.78	■■■■■ 4.12
PBRM1-218	ENST00000458294	UNC13B	O14795	1591 aa		40.78	■■■■■ 4.12
PBRM1-218	ENST00000458294	ZFYVE9	O95405	1425 aa		40.76	■■■■■ 4.12
PBRM1-218	ENST00000458294	MYO5B	Q9ULV0	1848 aa		40.76	■■■■■ 4.12
PBRM1-218	ENST00000458294	BCAN	Q96GW7	911 aa		40.75	■■■■■ 4.11
PBRM1-218	ENST00000458294	TMEM131L	A2VDJ0	1609 aa		40.73	■■■■■ 4.11
PBRM1-218	ENST00000458294	PLEKHG1	Q9ULL1	1385 aa		40.73	■■■■■ 4.11
PBRM1-218	ENST00000458294	ROBO1	Q9Y6N7	1651 aa		40.72	■■■■■ 4.11
PBRM1-218	ENST00000458294	HDGF	P51858	240 aa	Known RBP	40.71	■■■■■ 4.11
PBRM1-218	ENST00000458294	RIMS2	Q9UQ26	1411 aa		40.7	■■■■■ 4.11
PBRM1-218	ENST00000458294	RBM33	Q96EV2	1170 aa	Known RBP	40.69	■■■■■ 4.1
PBRM1-218	ENST00000458294	ROCK1	Q13464	1354 aa		40.67	■■■■■ 4.1
PBRM1-218	ENST00000458294	CHD2	O14647	1828 aa	Known RBP	40.67	■■■■■ 4.1
PBRM1-218	ENST00000458294	MSH6	P52701	1360 aa		40.66	■■■■■ 4.1
PBRM1-218	ENST00000458294	PPP1R15A	O75807	674 aa	Predicted RBP	40.66	■■■■■ 4.1
PBRM1-218	ENST00000458294		E9PCH4	1651 aa		40.64	■■■■■ 4.1
PBRM1-218	ENST00000458294	RGS17	Q9UGC6	210 aa	Predicted RBP	40.62	■■■■■ 4.09
PBRM1-218	ENST00000458294	IQGAP3	Q86VI3	1631 aa		40.61	■■■■■ 4.09
PBRM1-218	ENST00000458294	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	40.59	■■■■■ 4.09
PBRM1-218	ENST00000458294	TBX22	Q9Y458	520 aa		40.57	■■■■■ 4.09
PBRM1-218	ENST00000458294	CHGA	P10645	457 aa	Known RBP	40.55	■■■■■ 4.08
PBRM1-218	ENST00000458294	SLAIN2	Q9P270	581 aa		40.54	■■■■■ 4.08
PBRM1-218	ENST00000458294	DIP2A	Q14689	1571 aa		40.52	■■■■■ 4.08
PBRM1-218	ENST00000458294	NCOA3	Q9Y6Q9	1424 aa		40.52	■■■■■ 4.08
PBRM1-218	ENST00000458294	ADAMTS13	Q76LX8	1427 aa		40.5	■■■■■ 4.07
PBRM1-218	ENST00000458294	PHLPP1	O60346	1717 aa		40.49	■■■■■ 4.07
PBRM1-218	ENST00000458294	NUP155	O75694	1391 aa		40.47	■■■■■ 4.07
PBRM1-218	ENST00000458294	PIK3R4	Q99570	1358 aa		40.47	■■■■■ 4.07
PBRM1-218	ENST00000458294	NUTM2D	Q5VT03	806 aa	Predicted RBP	40.42	■■■■■ 4.06
PBRM1-218	ENST00000458294	JCAD	Q9P266	1359 aa		40.4	■■■■■ 4.06
PBRM1-218	ENST00000458294	TRPM2	O94759	1503 aa		40.38	■■■■■ 4.06
PBRM1-218	ENST00000458294	ITGAE	P38570	1179 aa		40.37	■■■■■ 4.05
PBRM1-218	ENST00000458294	C14orf37	Q86TY3	774 aa		40.37	■■■■■ 4.05
PBRM1-218	ENST00000458294	POTEA	Q6S8J7	498 aa		40.36	■■■■■ 4.05
PBRM1-218	ENST00000458294	COL16A1	Q07092	1604 aa	Predicted RBP	40.35	■■■■■ 4.05
PBRM1-218	ENST00000458294	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	40.35	■■■■■ 4.05
PBRM1-218	ENST00000458294	CADPS2	Q86UW7	1296 aa		40.33	■■■■■ 4.05
PBRM1-218	ENST00000458294	C19orf44	Q9H6X5	657 aa		40.33	■■■■■ 4.05
PBRM1-218	ENST00000458294	SPHKAP	Q2M3C7	1700 aa		40.31	■■■■■ 4.04
PBRM1-218	ENST00000458294	ATF3	P18847	181 aa		40.28	■■■■■ 4.04
PBRM1-218	ENST00000458294	AMOTL2	Q9Y2J4	779 aa		40.27	■■■■■ 4.04
PBRM1-218	ENST00000458294	PTPRU	Q92729	1446 aa		40.26	■■■■■ 4.04
PBRM1-218	ENST00000458294	AHDC1	Q5TGY3	1603 aa	Predicted RBP	40.26	■■■■■ 4.04
PBRM1-218	ENST00000458294	SETBP1	Q9Y6X0	1596 aa		40.25	■■■■■ 4.03
PBRM1-218	ENST00000458294	NRXN3	Q9Y4C0	1643 aa		40.24	■■■■■ 4.03
PBRM1-218	ENST00000458294	SPATA31A6	Q5VVP1	1343 aa		40.21	■■■■■ 4.03
PBRM1-218	ENST00000458294	XRN1	Q8IZH2	1706 aa	Known RBP	40.21	■■■■■ 4.03
PBRM1-218	ENST00000458294	DCC	P43146	1447 aa		40.19	■■■■■ 4.02
PBRM1-218	ENST00000458294	PPARGC1B	Q86YN6	1023 aa	Known RBP	40.19	■■■■■ 4.02
PBRM1-218	ENST00000458294	SHPRH	Q149N8	1683 aa		40.17	■■■■■ 4.02
PBRM1-218	ENST00000458294	ZNF326	Q5BKZ1	582 aa	Known RBP	40.15	■■■■■ 4.02
PBRM1-218	ENST00000458294	LRP6	O75581	1613 aa		40.14	■■■■■ 4.02
PBRM1-218	ENST00000458294	BRINP3	Q76B58	766 aa		40.11	■■■■■ 4.01
PBRM1-218	ENST00000458294	CLTCL1	P53675	1640 aa		40.1	■■■■■ 4.01
PBRM1-218	ENST00000458294	NEXMIF	Q5QGS0	1516 aa		40.07	■■■■■ 4.01
PBRM1-218	ENST00000458294	MET	P08581	1390 aa		40.07	■■■■■ 4
PBRM1-218	ENST00000458294	RRBP1	Q9P2E9	1410 aa	Known RBP	40.07	■■■■■ 4
PBRM1-218	ENST00000458294	MEX3C	Q5U5Q3	659 aa	Known RBP	40.06	■■■■■ 4
PBRM1-218	ENST00000458294	SETD1A	O15047	1707 aa	Known RBP	40.05	■■■■■ 4
PBRM1-218	ENST00000458294	ASXL1	Q8IXJ9	1541 aa		40.05	■■■■■ 4
PBRM1-218	ENST00000458294	MST1R	Q04912	1400 aa		40.03	■■■■■ 4
PBRM1-218	ENST00000458294	KIF1B	O60333	1816 aa		40.02	■■■■■ 4
PBRM1-218	ENST00000458294	NAIP	Q13075	1403 aa		40.02	■■■■■ 4
PBRM1-218	ENST00000458294	ZNF772	Q68DY9	489 aa	Predicted RBP	40.02	■■■■■ 4
PBRM1-218	ENST00000458294	NHSL1	Q5SYE7	1610 aa		39.98	■■■■□ 3.99
PBRM1-218	ENST00000458294	ADGRL3	Q9HAR2	1447 aa		39.98	■■■■□ 3.99
PBRM1-218	ENST00000458294	SETD5	Q9C0A6	1442 aa		39.97	■■■■□ 3.99
PBRM1-218	ENST00000458294	NALCN	Q8IZF0	1738 aa		39.93	■■■■□ 3.98
PBRM1-218	ENST00000458294	LRRC59	Q96AG4	307 aa	Known RBP	39.87	■■■■□ 3.97
PBRM1-218	ENST00000458294	NUTM2B	A6NNL0	878 aa	Predicted RBP	39.86	■■■■□ 3.97
PBRM1-218	ENST00000458294	NUTM2E	B1AL46	878 aa	Predicted RBP	39.86	■■■■□ 3.97
PBRM1-218	ENST00000458294	NUTM2A	Q8IVF1	878 aa	Predicted RBP	39.86	■■■■□ 3.97
PBRM1-218	ENST00000458294	HFM1	A2PYH4	1435 aa		39.85	■■■■□ 3.97
PBRM1-218	ENST00000458294	PTCH1	Q13635	1447 aa		39.85	■■■■□ 3.97
PBRM1-218	ENST00000458294	VGF	O15240	615 aa	Predicted RBP	39.85	■■■■□ 3.97
PBRM1-218	ENST00000458294	TRIM52	Q96A61	297 aa		39.82	■■■■□ 3.97
PBRM1-218	ENST00000458294	RPGRIP1L	Q68CZ1	1315 aa		39.8	■■■■□ 3.96
PBRM1-218	ENST00000458294	RXRB	P28702	533 aa		39.79	■■■■□ 3.96
PBRM1-218	ENST00000458294	PRAG1	Q86YV5	1406 aa		39.79	■■■■□ 3.96
PBRM1-218	ENST00000458294	C1orf167	Q5SNV9	1468 aa		39.78	■■■■□ 3.96
PBRM1-218	ENST00000458294	CDK12	Q9NYV4	1490 aa	Predicted RBP	39.76	■■■■□ 3.96
PBRM1-218	ENST00000458294	PNPLA6	Q8IY17	1366 aa		39.76	■■■■□ 3.96
PBRM1-218	ENST00000458294	AFF2	P51816	1311 aa		39.76	■■■■□ 3.96
PBRM1-218	ENST00000458294	DDX17	Q92841	729 aa	Known RBP	39.75	■■■■□ 3.95
PBRM1-218	ENST00000458294	SLC4A1AP	Q9BWU0	796 aa	Known RBP	39.75	■■■■□ 3.95
PBRM1-218	ENST00000458294	PPL	O60437	1756 aa		39.74	■■■■□ 3.95
PBRM1-218	ENST00000458294	LAMC1	P11047	1609 aa		39.74	■■■■□ 3.95
PBRM1-218	ENST00000458294	ROBO2	Q9HCK4	1378 aa		39.73	■■■■□ 3.95
PBRM1-218	ENST00000458294	UPF1	Q92900	1129 aa	Known RBP eCLIP	39.71	■■■■□ 3.95
PBRM1-218	ENST00000458294	C8orf37	Q96NL8	207 aa		39.66	■■■■□ 3.94
PBRM1-218	ENST00000458294	SOS2	Q07890	1332 aa	Predicted RBP	39.63	■■■■□ 3.93
PBRM1-218	ENST00000458294	ORAI2	Q96SN7	254 aa		39.61	■■■■□ 3.93
PBRM1-218	ENST00000458294	RBM6	P78332	1123 aa	Known RBP	39.56	■■■■□ 3.92
PBRM1-218	ENST00000458294	QTRT2	Q9H974	415 aa	Known RBP	39.56	■■■■□ 3.92
PBRM1-218	ENST00000458294	CDC42BPG	Q6DT37	1551 aa		39.55	■■■■□ 3.92
PBRM1-218	ENST00000458294	CCDC144A	A2RUR9	1427 aa		39.54	■■■■□ 3.92
PBRM1-218	ENST00000458294	RGS12	O14924	1447 aa		39.53	■■■■□ 3.92
PBRM1-218	ENST00000458294	ADAMTS2	O95450	1211 aa		39.52	■■■■□ 3.92
PBRM1-218	ENST00000458294	FOXD1	Q16676	465 aa		39.52	■■■■□ 3.92
PBRM1-218	ENST00000458294	NGLY1	Q96IV0	654 aa		39.52	■■■■□ 3.92

Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms