RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 IQGAP3Q86VI3 1631 aa25.54■■□□□ 1.68
CNEP1R1-203ENST00000458059 KDM2BQ8NHM5 1336 aa25.54■■□□□ 1.68
CNEP1R1-203ENST00000458059 KIF3BO15066 747 aa25.53■■□□□ 1.68
CNEP1R1-203ENST00000458059 CENPQQ7L2Z9 268 aaPredicted RBP25.52■■□□□ 1.68
CNEP1R1-203ENST00000458059 RRP7AQ9Y3A4 280 aaKnown RBP25.52■■□□□ 1.68
CNEP1R1-203ENST00000458059 DUOX2Q9NRD8 1548 aa25.52■■□□□ 1.68
CNEP1R1-203ENST00000458059 SLFN5Q08AF3 891 aa25.51■■□□□ 1.67
CNEP1R1-203ENST00000458059 EIF2AK4Q9P2K8 1649 aaKnown RBP25.51■■□□□ 1.67
CNEP1R1-203ENST00000458059 MAST1Q9Y2H9 1570 aa25.5■■□□□ 1.67
CNEP1R1-203ENST00000458059 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.5■■□□□ 1.67
CNEP1R1-203ENST00000458059 CANXP27824 592 aaKnown RBP25.48■■□□□ 1.67
CNEP1R1-203ENST00000458059 CDCA8Q53HL2 280 aa25.48■■□□□ 1.67
CNEP1R1-203ENST00000458059 DDRGK1Q96HY6 314 aa25.48■■□□□ 1.67
CNEP1R1-203ENST00000458059 PPM1GO15355 546 aaPredicted RBP25.47■■□□□ 1.67
CNEP1R1-203ENST00000458059 FRAT1Q92837 279 aaPredicted RBP25.47■■□□□ 1.67
CNEP1R1-203ENST00000458059 ZNF521Q96K83 1311 aa25.47■■□□□ 1.67
CNEP1R1-203ENST00000458059 C8orf34Q49A92 452 aa25.47■■□□□ 1.67
CNEP1R1-203ENST00000458059 CHD1O14646 1710 aa25.46■■□□□ 1.67
CNEP1R1-203ENST00000458059 ADGRF5Q8IZF2 1346 aa25.45■■□□□ 1.67
CNEP1R1-203ENST00000458059 FAM161AQ3B820 660 aa25.45■■□□□ 1.67
CNEP1R1-203ENST00000458059 CARD14Q9BXL6 1004 aa25.45■■□□□ 1.67
CNEP1R1-203ENST00000458059 PANK1Q8TE04 598 aa25.45■■□□□ 1.66
CNEP1R1-203ENST00000458059 NFKBIBQ15653 356 aa25.44■■□□□ 1.66
CNEP1R1-203ENST00000458059 COG6Q9Y2V7 657 aa25.44■■□□□ 1.66
CNEP1R1-203ENST00000458059 BCL2L13Q9BXK5 485 aa25.43■■□□□ 1.66
CNEP1R1-203ENST00000458059 PLCH2O75038 1416 aa25.43■■□□□ 1.66
CNEP1R1-203ENST00000458059 SCAF11Q99590 1463 aaKnown RBP25.43■■□□□ 1.66
CNEP1R1-203ENST00000458059 PLXNC1O60486 1568 aa25.43■■□□□ 1.66
CNEP1R1-203ENST00000458059 IGHDP01880 384 aa25.42■■□□□ 1.66
CNEP1R1-203ENST00000458059 LAMC1P11047 1609 aa25.42■■□□□ 1.66
CNEP1R1-203ENST00000458059 ATP10AO60312 1499 aa25.42■■□□□ 1.66
CNEP1R1-203ENST00000458059 ASXL1Q8IXJ9 1541 aa25.42■■□□□ 1.66
CNEP1R1-203ENST00000458059 MADDQ8WXG6 1647 aa25.41■■□□□ 1.66
CNEP1R1-203ENST00000458059 UGGT1Q9NYU2 1555 aa25.4■■□□□ 1.66
CNEP1R1-203ENST00000458059 ABCC2Q92887 1545 aa25.4■■□□□ 1.66
CNEP1R1-203ENST00000458059 TRAK1Q9UPV9 953 aa25.4■■□□□ 1.66
CNEP1R1-203ENST00000458059 NUTM2DQ5VT03 806 aaPredicted RBP25.39■■□□□ 1.66
CNEP1R1-203ENST00000458059 RNF17Q9BXT8 1623 aaKnown RBP25.37■■□□□ 1.65
CNEP1R1-203ENST00000458059 BRPF3Q9ULD4 1205 aa25.37■■□□□ 1.65
CNEP1R1-203ENST00000458059 TNNQ9UQP3 1299 aa25.37■■□□□ 1.65
CNEP1R1-203ENST00000458059 USP35Q9P2H5 1018 aa25.36■■□□□ 1.65
CNEP1R1-203ENST00000458059 INSRP06213 1382 aa25.35■■□□□ 1.65
CNEP1R1-203ENST00000458059 TMEM132EQ6IEE7 984 aa25.35■■□□□ 1.65
CNEP1R1-203ENST00000458059 CLUAP1Q96AJ1 413 aa25.35■■□□□ 1.65
CNEP1R1-203ENST00000458059 CLTCL1P53675 1640 aa25.35■■□□□ 1.65
CNEP1R1-203ENST00000458059 SLC12A5Q9H2X9 1139 aa25.35■■□□□ 1.65
CNEP1R1-203ENST00000458059 FRAT2O75474 233 aaPredicted RBP25.34■■□□□ 1.65
CNEP1R1-203ENST00000458059 SCAPERQ9BY12 1400 aa25.34■■□□□ 1.65
CNEP1R1-203ENST00000458059 EIF3AQ14152 1382 aaKnown RBP25.33■■□□□ 1.65
CNEP1R1-203ENST00000458059 E9PSI1 815 aa25.33■■□□□ 1.65
CNEP1R1-203ENST00000458059 NKTRP30414 1462 aaKnown RBP25.32■■□□□ 1.64
CNEP1R1-203ENST00000458059 SEC24BO95487 1268 aa25.32■■□□□ 1.64
CNEP1R1-203ENST00000458059 IQGAP1P46940 1657 aa25.32■■□□□ 1.64
CNEP1R1-203ENST00000458059 CENPJQ9HC77 1338 aaPredicted RBP25.32■■□□□ 1.64
CNEP1R1-203ENST00000458059 ANO8Q9HCE9 1232 aaPredicted RBP25.32■■□□□ 1.64
CNEP1R1-203ENST00000458059 MORC1Q86VD1 984 aa25.32■■□□□ 1.64
CNEP1R1-203ENST00000458059 PIK3C2GO75747 1445 aa25.31■■□□□ 1.64
CNEP1R1-203ENST00000458059 ABCC1P33527 1531 aa25.31■■□□□ 1.64
CNEP1R1-203ENST00000458059 WWC1Q8IX03 1113 aa25.3■■□□□ 1.64
CNEP1R1-203ENST00000458059 TRMT2AQ8IZ69 625 aaKnown RBP25.3■■□□□ 1.64
CNEP1R1-203ENST00000458059 KANK1Q14678 1352 aa25.3■■□□□ 1.64
CNEP1R1-203ENST00000458059 SAFB2Q14151 953 aaKnown RBP eCLIP25.3■■□□□ 1.64
CNEP1R1-203ENST00000458059 SYNMO15061 1565 aa25.3■■□□□ 1.64
CNEP1R1-203ENST00000458059 GSE1Q14687 1217 aa25.29■■□□□ 1.64
CNEP1R1-203ENST00000458059 ZCCHC11Q5TAX3 1644 aaKnown RBP25.27■■□□□ 1.64
CNEP1R1-203ENST00000458059 CFAP65Q6ZU64 1925 aaKnown RBP25.27■■□□□ 1.64
CNEP1R1-203ENST00000458059 TRPM2O94759 1503 aa25.27■■□□□ 1.64
CNEP1R1-203ENST00000458059 SLKQ9H2G2 1235 aaPredicted RBP25.26■■□□□ 1.63
CNEP1R1-203ENST00000458059 ERVK-7P63135 1459 aa25.26■■□□□ 1.63
CNEP1R1-203ENST00000458059 MYOM1P52179 1685 aa25.25■■□□□ 1.63
CNEP1R1-203ENST00000458059 GGT6Q6P531 493 aa25.25■■□□□ 1.63
CNEP1R1-203ENST00000458059 SPHKAPQ2M3C7 1700 aa25.24■■□□□ 1.63
CNEP1R1-203ENST00000458059 TCP11L2Q8N4U5 519 aa25.24■■□□□ 1.63
CNEP1R1-203ENST00000458059 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.23■■□□□ 1.63
CNEP1R1-203ENST00000458059 RLBP1P12271 317 aa25.23■■□□□ 1.63
CNEP1R1-203ENST00000458059 NSD3Q9BZ95 1437 aa25.22■■□□□ 1.63
CNEP1R1-203ENST00000458059 PTPRTO14522 1441 aa25.22■■□□□ 1.63
CNEP1R1-203ENST00000458059 ZFYVE16Q7Z3T8 1539 aa25.21■■□□□ 1.63
CNEP1R1-203ENST00000458059 MTHFSP49914 203 aa25.21■■□□□ 1.63
CNEP1R1-203ENST00000458059 SPRYD3Q8NCJ5 442 aa25.2■■□□□ 1.63
CNEP1R1-203ENST00000458059 KDM5AP29375 1690 aaKnown RBP25.2■■□□□ 1.63
CNEP1R1-203ENST00000458059 ARXQ96QS3 562 aa25.2■■□□□ 1.62
CNEP1R1-203ENST00000458059 CEP152O94986 1710 aa25.19■■□□□ 1.62
CNEP1R1-203ENST00000458059 NOS1P29475 1434 aa25.18■■□□□ 1.62
CNEP1R1-203ENST00000458059 PCDHB15Q9Y5E8 787 aa25.18■■□□□ 1.62
CNEP1R1-203ENST00000458059 CGNL1Q0VF96 1302 aa25.17■■□□□ 1.62
CNEP1R1-203ENST00000458059 SHROOM2Q13796 1616 aa25.17■■□□□ 1.62
CNEP1R1-203ENST00000458059 FANCAO15360 1455 aa25.17■■□□□ 1.62
CNEP1R1-203ENST00000458059 U2AF1L5P0DN76 240 aaPredicted RBP25.15■■□□□ 1.62
CNEP1R1-203ENST00000458059 RARSP54136 660 aaKnown RBP25.15■■□□□ 1.62
CNEP1R1-203ENST00000458059 U2AF1Q01081 240 aaKnown RBP eCLIP25.15■■□□□ 1.62
CNEP1R1-203ENST00000458059 USP19O94966 1318 aa25.15■■□□□ 1.62
CNEP1R1-203ENST00000458059 NPC1L1Q9UHC9 1359 aa25.15■■□□□ 1.62
CNEP1R1-203ENST00000458059 PDE3AQ14432 1141 aa25.14■■□□□ 1.61
CNEP1R1-203ENST00000458059 ABCA6Q8N139 1617 aa25.14■■□□□ 1.61
CNEP1R1-203ENST00000458059 TSR2Q969E8 191 aaKnown RBP25.13■■□□□ 1.61
CNEP1R1-203ENST00000458059 RUNDC1Q96C34 613 aa25.13■■□□□ 1.61
CNEP1R1-203ENST00000458059 ATP7AQ04656 1500 aa25.13■■□□□ 1.61
CNEP1R1-203ENST00000458059 STAC3Q96MF2 364 aa25.12■■□□□ 1.61
CNEP1R1-203ENST00000458059 ADGRL1O94910 1474 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms