RNA–Protein interactions for RNA: ENST00000456517.2

HIPK3-203, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HIPK3, Length 7,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-203ENST00000456517 ATP6V1DQ9Y5K8 247 aa17.84■□□□□ 0.45
HIPK3-203ENST00000456517 PHLDB1Q86UU1 1377 aa17.84■□□□□ 0.45
HIPK3-203ENST00000456517 PCMTD1Q96MG8 357 aaPredicted RBP17.83■□□□□ 0.45
HIPK3-203ENST00000456517 DDX58O95786 925 aaKnown RBP17.83■□□□□ 0.44
HIPK3-203ENST00000456517 CCDC47Q96A33 483 aaKnown RBP17.83■□□□□ 0.44
HIPK3-203ENST00000456517 RBM33Q96EV2 1170 aaKnown RBP17.83■□□□□ 0.44
HIPK3-203ENST00000456517 CCAR2Q8N163 923 aaKnown RBP17.82■□□□□ 0.44
HIPK3-203ENST00000456517 RUFY2Q8WXA3 655 aa17.82■□□□□ 0.44
HIPK3-203ENST00000456517 CCDC144AA2RUR9 1427 aa17.82■□□□□ 0.44
HIPK3-203ENST00000456517 PANK3Q9H999 370 aa17.82■□□□□ 0.44
HIPK3-203ENST00000456517 TRDNQ13061 729 aa17.82■□□□□ 0.44
HIPK3-203ENST00000456517 CPLX1O14810 134 aa17.81■□□□□ 0.44
HIPK3-203ENST00000456517 IFIT2P09913 472 aaKnown RBP17.81■□□□□ 0.44
HIPK3-203ENST00000456517 ATF3P18847 181 aa17.79■□□□□ 0.44
HIPK3-203ENST00000456517 ZKSCAN1P17029 563 aaPredicted RBP17.79■□□□□ 0.44
HIPK3-203ENST00000456517 KIF15Q9NS87 1388 aa17.79■□□□□ 0.44
HIPK3-203ENST00000456517 CCDC70Q6NSX1 233 aa17.79■□□□□ 0.44
HIPK3-203ENST00000456517 ZKSCAN2Q63HK3 967 aa17.79■□□□□ 0.44
HIPK3-203ENST00000456517 ERICH2A1L162 156 aa17.78■□□□□ 0.44
HIPK3-203ENST00000456517 NFXL1Q6ZNB6 911 aa17.78■□□□□ 0.44
HIPK3-203ENST00000456517 IPO7O95373 1038 aaKnown RBP17.78■□□□□ 0.44
HIPK3-203ENST00000456517 ST20-MTHFSA0A0A6YYL1 179 aa17.77■□□□□ 0.44
HIPK3-203ENST00000456517 ANKRD20A12PQ8NF67 263 aa17.77■□□□□ 0.44
HIPK3-203ENST00000456517 G3BP1Q13283 466 aaKnown RBP eCLIP17.76■□□□□ 0.43
HIPK3-203ENST00000456517 SMARCA2P51531 1590 aa17.76■□□□□ 0.43
HIPK3-203ENST00000456517 ABCC8Q09428 1581 aa17.76■□□□□ 0.43
HIPK3-203ENST00000456517 ANO2Q9NQ90 1003 aa17.75■□□□□ 0.43
HIPK3-203ENST00000456517 RAPGEF4Q8WZA2 1011 aa17.75■□□□□ 0.43
HIPK3-203ENST00000456517 MYBBP1AQ9BQG0 1328 aaKnown RBP17.75■□□□□ 0.43
HIPK3-203ENST00000456517 DDX11L8A8MPP1 907 aa17.75■□□□□ 0.43
HIPK3-203ENST00000456517 FHOD3Q2V2M9 1422 aa17.74■□□□□ 0.43
HIPK3-203ENST00000456517 E9PSI1 815 aa17.74■□□□□ 0.43
HIPK3-203ENST00000456517 FKBP5Q13451 457 aaPredicted RBP17.73■□□□□ 0.43
HIPK3-203ENST00000456517 HOOK1Q9UJC3 728 aaKnown RBP17.73■□□□□ 0.43
HIPK3-203ENST00000456517 DDX49Q9Y6V7 483 aaKnown RBP17.73■□□□□ 0.43
HIPK3-203ENST00000456517 DIAPH1O60610 1272 aaKnown RBP17.73■□□□□ 0.43
HIPK3-203ENST00000456517 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.73■□□□□ 0.43
HIPK3-203ENST00000456517 R3HCC1Q9Y3T6 440 aaKnown RBP17.73■□□□□ 0.43
HIPK3-203ENST00000456517 IPO9Q96P70 1041 aaKnown RBP17.73■□□□□ 0.43
HIPK3-203ENST00000456517 RNF20Q5VTR2 975 aa17.72■□□□□ 0.43
HIPK3-203ENST00000456517 REC8O95072 547 aa17.72■□□□□ 0.43
HIPK3-203ENST00000456517 CCDC88BA6NC98 1476 aa17.71■□□□□ 0.43
HIPK3-203ENST00000456517 CCDC27Q2M243 656 aa17.71■□□□□ 0.43
HIPK3-203ENST00000456517 FYB1O15117 783 aa17.71■□□□□ 0.43
HIPK3-203ENST00000456517 CENPQQ7L2Z9 268 aaPredicted RBP17.7■□□□□ 0.42
HIPK3-203ENST00000456517 OSCARQ8IYS5 282 aa17.7■□□□□ 0.42
HIPK3-203ENST00000456517 RIPK4P57078 832 aa17.69■□□□□ 0.42
HIPK3-203ENST00000456517 RIC3Q7Z5B4 369 aa17.69■□□□□ 0.42
HIPK3-203ENST00000456517 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.69■□□□□ 0.42
HIPK3-203ENST00000456517 NLRP2Q9NX02 1062 aa17.69■□□□□ 0.42
HIPK3-203ENST00000456517 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.68■□□□□ 0.427e-7■■■■■ 57.2
HIPK3-203ENST00000456517 CT47A1Q5JQC4 288 aaPredicted RBP17.68■□□□□ 0.42
HIPK3-203ENST00000456517 ODF2Q5BJF6 829 aa17.68■□□□□ 0.42
HIPK3-203ENST00000456517 COG6Q9Y2V7 657 aa17.68■□□□□ 0.42
HIPK3-203ENST00000456517 SAFBQ15424 915 aaKnown RBP eCLIP17.68■□□□□ 0.42
HIPK3-203ENST00000456517 NEUROD6Q96NK8 337 aa17.68■□□□□ 0.42
HIPK3-203ENST00000456517 TSPYL4Q9UJ04 414 aa17.68■□□□□ 0.42
HIPK3-203ENST00000456517 AIMP1Q12904 312 aaKnown RBP17.67■□□□□ 0.42
HIPK3-203ENST00000456517 IKQ13123 557 aaPredicted RBP17.67■□□□□ 0.42
HIPK3-203ENST00000456517 BICD2Q8TD16 824 aa17.67■□□□□ 0.42
HIPK3-203ENST00000456517 PLIN1O60240 522 aa17.67■□□□□ 0.42
HIPK3-203ENST00000456517 SETQ01105 290 aaPredicted RBP17.67■□□□□ 0.42
HIPK3-203ENST00000456517 GPS2Q13227 327 aa17.67■□□□□ 0.42
HIPK3-203ENST00000456517 API5Q9BZZ5 524 aaKnown RBP17.67■□□□□ 0.42
HIPK3-203ENST00000456517 ROCK1Q13464 1354 aa17.67■□□□□ 0.42
HIPK3-203ENST00000456517 WASHC2AQ641Q2 1341 aa17.67■□□□□ 0.42
HIPK3-203ENST00000456517 PATL2C9JE40 543 aaKnown RBP17.67■□□□□ 0.42
HIPK3-203ENST00000456517 FAM69CQ0P6D2 419 aa17.67■□□□□ 0.42
HIPK3-203ENST00000456517 PTPRGP23470 1445 aa17.66■□□□□ 0.42
HIPK3-203ENST00000456517 RAPGEF2Q9Y4G8 1499 aa17.66■□□□□ 0.42
HIPK3-203ENST00000456517 DDX19BQ9UMR2 479 aa17.66■□□□□ 0.42
HIPK3-203ENST00000456517 CCAR1Q8IX12 1150 aaKnown RBP17.66■□□□□ 0.42
HIPK3-203ENST00000456517 RALYLQ86SE5 291 aaKnown RBP17.66■□□□□ 0.42
HIPK3-203ENST00000456517 ZNF592Q92610 1267 aa17.65■□□□□ 0.42
HIPK3-203ENST00000456517 WASHC4Q2M389 1173 aa17.65■□□□□ 0.42
HIPK3-203ENST00000456517 APAF1O14727 1248 aa17.65■□□□□ 0.42
HIPK3-203ENST00000456517 PPP1R1BQ9UD71 204 aaPredicted RBP17.64■□□□□ 0.42
HIPK3-203ENST00000456517 FAM161AQ3B820 660 aa17.64■□□□□ 0.41
HIPK3-203ENST00000456517 MTMR7Q9Y216 660 aa17.64■□□□□ 0.41
HIPK3-203ENST00000456517 FOSBP53539 338 aa17.64■□□□□ 0.41
HIPK3-203ENST00000456517 SKOR2Q2VWA4 1001 aaPredicted RBP17.64■□□□□ 0.41
HIPK3-203ENST00000456517 NUTM2GQ5VZR2 741 aa17.64■□□□□ 0.41
HIPK3-203ENST00000456517 NAP1L1P55209 391 aaKnown RBP17.63■□□□□ 0.41
HIPK3-203ENST00000456517 HSP90AB4PQ58FF6 505 aa17.63■□□□□ 0.41
HIPK3-203ENST00000456517 ERC2O15083 957 aa17.63■□□□□ 0.41
HIPK3-203ENST00000456517 VPS37CA5D8V6 355 aaPredicted RBP17.62■□□□□ 0.41
HIPK3-203ENST00000456517 EPS15P42566 896 aa17.61■□□□□ 0.41
HIPK3-203ENST00000456517 SF3B2Q13435 895 aaKnown RBP17.61■□□□□ 0.41
HIPK3-203ENST00000456517 ZFYVE27Q5T4F4 411 aa17.61■□□□□ 0.41
HIPK3-203ENST00000456517 HOMER1Q86YM7 354 aa17.61■□□□□ 0.41
HIPK3-203ENST00000456517 BRMS1Q9HCU9 246 aa17.61■□□□□ 0.41
HIPK3-203ENST00000456517 HMOX1P09601 288 aa17.61■□□□□ 0.41
HIPK3-203ENST00000456517 FAM177BA6PVY3 158 aa17.61■□□□□ 0.41
HIPK3-203ENST00000456517 CRBNQ96SW2 442 aa17.6■□□□□ 0.41
HIPK3-203ENST00000456517 TMEM132AQ24JP5 1023 aa17.6■□□□□ 0.41
HIPK3-203ENST00000456517 DZIP1LQ8IYY4 767 aaKnown RBP17.6■□□□□ 0.41
HIPK3-203ENST00000456517 SMC3Q9UQE7 1217 aa17.6■□□□□ 0.41
HIPK3-203ENST00000456517 WWC2Q6AWC2 1192 aa17.59■□□□□ 0.41
HIPK3-203ENST00000456517 SLC4A3P48751 1232 aa17.59■□□□□ 0.41
HIPK3-203ENST00000456517 XBP1P17861 261 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms