RNA–Protein interactions for RNA: ENST00000456330.1

TSC22D4-204, Transcript of TSC22 domain family member 4, humanhuman

TSL 3

Gene TSC22D4, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-204ENST00000456330 IDI1Q13907 227 aa22.29■■□□□ 1.16
TSC22D4-204ENST00000456330 NKTRP30414 1462 aaKnown RBP22.26■■□□□ 1.15
TSC22D4-204ENST00000456330 ZFYVE9O95405 1425 aa22.23■■□□□ 1.15
TSC22D4-204ENST00000456330 CHD2O14647 1828 aaKnown RBP22.23■■□□□ 1.15
TSC22D4-204ENST00000456330 NAIPQ13075 1403 aa22.23■■□□□ 1.15
TSC22D4-204ENST00000456330 STAG3Q9UJ98 1225 aa22.22■■□□□ 1.15
TSC22D4-204ENST00000456330 ROBO1Q9Y6N7 1651 aa22.22■■□□□ 1.15
TSC22D4-204ENST00000456330 TMEM94Q12767 1356 aa22.22■■□□□ 1.15
TSC22D4-204ENST00000456330 FAM135BQ49AJ0 1406 aa22.22■■□□□ 1.15
TSC22D4-204ENST00000456330 SLC52A1Q9NWF4 448 aa22.21■■□□□ 1.15
TSC22D4-204ENST00000456330 NUP155O75694 1391 aa22.21■■□□□ 1.15
TSC22D4-204ENST00000456330 CLTCL1P53675 1640 aa22.2■■□□□ 1.14
TSC22D4-204ENST00000456330 KCNA6P17658 529 aa22.19■■□□□ 1.14
TSC22D4-204ENST00000456330 PLEKHG1Q9ULL1 1385 aa22.16■■□□□ 1.14
TSC22D4-204ENST00000456330 PHF23Q9BUL5 403 aaPredicted RBP22.16■■□□□ 1.14
TSC22D4-204ENST00000456330 HFM1A2PYH4 1435 aa22.15■■□□□ 1.14
TSC22D4-204ENST00000456330 SLC26A8Q96RN1 970 aa22.15■■□□□ 1.14
TSC22D4-204ENST00000456330 KIF1BO60333 1816 aa22.15■■□□□ 1.14
TSC22D4-204ENST00000456330 TRPM2O94759 1503 aa22.14■■□□□ 1.13
TSC22D4-204ENST00000456330 DIP2AQ14689 1571 aa22.13■■□□□ 1.13
TSC22D4-204ENST00000456330 RIMS2Q9UQ26 1411 aa22.13■■□□□ 1.13
TSC22D4-204ENST00000456330 SENP3Q9H4L4 574 aaPredicted RBP22.12■■□□□ 1.13
TSC22D4-204ENST00000456330 NRXN3Q9Y4C0 1643 aa22.11■■□□□ 1.13
TSC22D4-204ENST00000456330 PHLPP1O60346 1717 aa22.09■■□□□ 1.13
TSC22D4-204ENST00000456330 PROSER2Q86WR7 435 aaPredicted RBP22.08■■□□□ 1.13
TSC22D4-204ENST00000456330 RGS17Q9UGC6 210 aaPredicted RBP22.08■■□□□ 1.13
TSC22D4-204ENST00000456330 ADAMTS13Q76LX8 1427 aa22.06■■□□□ 1.12
TSC22D4-204ENST00000456330 CHGAP10645 457 aaKnown RBP22.06■■□□□ 1.12
TSC22D4-204ENST00000456330 MSH6P52701 1360 aa22.06■■□□□ 1.12
TSC22D4-204ENST00000456330 COL16A1Q07092 1604 aaPredicted RBP22.05■■□□□ 1.12
TSC22D4-204ENST00000456330 NCOA3Q9Y6Q9 1424 aa22.05■■□□□ 1.12
TSC22D4-204ENST00000456330 RBM33Q96EV2 1170 aaKnown RBP22.04■■□□□ 1.12
TSC22D4-204ENST00000456330 NEXMIFQ5QGS0 1516 aa22.04■■□□□ 1.12
TSC22D4-204ENST00000456330 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.03■■□□□ 1.12
TSC22D4-204ENST00000456330 NUTM2DQ5VT03 806 aaPredicted RBP22.02■■□□□ 1.12
TSC22D4-204ENST00000456330 TBX22Q9Y458 520 aa22.02■■□□□ 1.12
TSC22D4-204ENST00000456330 PIK3R4Q99570 1358 aa22.01■■□□□ 1.11
TSC22D4-204ENST00000456330 PPLO60437 1756 aa22.01■■□□□ 1.11
TSC22D4-204ENST00000456330 SETD1AO15047 1707 aaKnown RBP22■■□□□ 1.11
TSC22D4-204ENST00000456330 PPP1R15AO75807 674 aaPredicted RBP22■■□□□ 1.11
TSC22D4-204ENST00000456330 HDGFP51858 240 aaKnown RBP22■■□□□ 1.11
TSC22D4-204ENST00000456330 ABCF1Q8NE71 845 aaKnown RBP eCLIP22■■□□□ 1.11
TSC22D4-204ENST00000456330 XRN1Q8IZH2 1706 aaKnown RBP22■■□□□ 1.11
TSC22D4-204ENST00000456330 SETBP1Q9Y6X0 1596 aa21.99■■□□□ 1.11
TSC22D4-204ENST00000456330 BCANQ96GW7 911 aa21.98■■□□□ 1.11
TSC22D4-204ENST00000456330 AHDC1Q5TGY3 1603 aaPredicted RBP21.98■■□□□ 1.11
TSC22D4-204ENST00000456330 SLAIN2Q9P270 581 aa21.97■■□□□ 1.11
TSC22D4-204ENST00000456330 IFT172Q9UG01 1749 aa21.97■■□□□ 1.11
TSC22D4-204ENST00000456330 SHPRHQ149N8 1683 aa21.95■■□□□ 1.1
TSC22D4-204ENST00000456330 TRIM52Q96A61 297 aa21.94■■□□□ 1.1
TSC22D4-204ENST00000456330 JCADQ9P266 1359 aa21.94■■□□□ 1.1
TSC22D4-204ENST00000456330 PTPRUQ92729 1446 aa21.93■■□□□ 1.1
TSC22D4-204ENST00000456330 POTEAQ6S8J7 498 aa21.91■■□□□ 1.1
TSC22D4-204ENST00000456330 DCCP43146 1447 aa21.9■■□□□ 1.1
TSC22D4-204ENST00000456330 NALCNQ8IZF0 1738 aa21.89■■□□□ 1.1
TSC22D4-204ENST00000456330 LRP6O75581 1613 aa21.89■■□□□ 1.09
TSC22D4-204ENST00000456330 FOXD1Q16676 465 aa21.87■■□□□ 1.09
TSC22D4-204ENST00000456330 SLC4A1APQ9BWU0 796 aaKnown RBP21.87■■□□□ 1.09
TSC22D4-204ENST00000456330 NHSL1Q5SYE7 1610 aa21.87■■□□□ 1.09
TSC22D4-204ENST00000456330 ZNF326Q5BKZ1 582 aaKnown RBP21.86■■□□□ 1.09
TSC22D4-204ENST00000456330 CADPS2Q86UW7 1296 aa21.86■■□□□ 1.09
TSC22D4-204ENST00000456330 C19orf44Q9H6X5 657 aa21.86■■□□□ 1.09
TSC22D4-204ENST00000456330 ASXL1Q8IXJ9 1541 aa21.83■■□□□ 1.09
TSC22D4-204ENST00000456330 SPATA31A6Q5VVP1 1343 aa21.82■■□□□ 1.08
TSC22D4-204ENST00000456330 AMOTL2Q9Y2J4 779 aa21.82■■□□□ 1.08
TSC22D4-204ENST00000456330 SETD5Q9C0A6 1442 aa21.81■■□□□ 1.08
TSC22D4-204ENST00000456330 C14orf37Q86TY3 774 aa21.81■■□□□ 1.08
TSC22D4-204ENST00000456330 METP08581 1390 aa21.8■■□□□ 1.08
TSC22D4-204ENST00000456330 ATF3P18847 181 aa21.8■■□□□ 1.08
TSC22D4-204ENST00000456330 MST1RQ04912 1400 aa21.8■■□□□ 1.08
TSC22D4-204ENST00000456330 RAB3GAP2Q9H2M9 1393 aa21.79■■□□□ 1.08
TSC22D4-204ENST00000456330 CCDC144AA2RUR9 1427 aa21.79■■□□□ 1.08
TSC22D4-204ENST00000456330 BRINP3Q76B58 766 aa21.78■■□□□ 1.08
TSC22D4-204ENST00000456330 ADGRL3Q9HAR2 1447 aa21.77■■□□□ 1.08
TSC22D4-204ENST00000456330 LAMC1P11047 1609 aa21.77■■□□□ 1.07
TSC22D4-204ENST00000456330 SPATA31E1Q6ZUB1 1445 aa21.76■■□□□ 1.07
TSC22D4-204ENST00000456330 PRAG1Q86YV5 1406 aa21.75■■□□□ 1.07
TSC22D4-204ENST00000456330 MPHOSPH9Q99550 1183 aa21.74■■□□□ 1.07
TSC22D4-204ENST00000456330 KNDC1Q76NI1 1749 aa21.73■■□□□ 1.07
TSC22D4-204ENST00000456330 PTCH1Q13635 1447 aa21.72■■□□□ 1.07
TSC22D4-204ENST00000456330 CDK12Q9NYV4 1490 aaPredicted RBP21.67■■□□□ 1.06
TSC22D4-204ENST00000456330 ZNF772Q68DY9 489 aaPredicted RBP21.67■■□□□ 1.06
TSC22D4-204ENST00000456330 MEX3CQ5U5Q3 659 aaKnown RBP21.65■■□□□ 1.06
TSC22D4-204ENST00000456330 C1orf167Q5SNV9 1468 aa21.64■■□□□ 1.05
TSC22D4-204ENST00000456330 PIK3C2GO75747 1445 aa21.63■■□□□ 1.05
TSC22D4-204ENST00000456330 ROBO2Q9HCK4 1378 aa21.63■■□□□ 1.05
TSC22D4-204ENST00000456330 RPGRIP1LQ68CZ1 1315 aa21.63■■□□□ 1.05
TSC22D4-204ENST00000456330 ADGRF5Q8IZF2 1346 aa21.63■■□□□ 1.05
TSC22D4-204ENST00000456330 RGL3Q3MIN7 710 aa21.63■■□□□ 1.05
TSC22D4-204ENST00000456330 PNPLA6Q8IY17 1366 aa21.62■■□□□ 1.05
TSC22D4-204ENST00000456330 VGFO15240 615 aaPredicted RBP21.62■■□□□ 1.05
TSC22D4-204ENST00000456330 MYOM2P54296 1465 aa21.6■■□□□ 1.05
TSC22D4-204ENST00000456330 CDC42BPGQ6DT37 1551 aa21.6■■□□□ 1.05
TSC22D4-204ENST00000456330 COL22A1Q8NFW1 1626 aaPredicted RBP21.59■■□□□ 1.05
TSC22D4-204ENST00000456330 LRRC59Q96AG4 307 aaKnown RBP21.59■■□□□ 1.05
TSC22D4-204ENST00000456330 NRXN1Q9ULB1 1477 aa21.58■■□□□ 1.05
TSC22D4-204ENST00000456330 ANKRD30BQ9BXX2 1392 aa21.58■■□□□ 1.04
TSC22D4-204ENST00000456330 AFF2P51816 1311 aa21.56■■□□□ 1.04
TSC22D4-204ENST00000456330 NUTM2BA6NNL0 878 aaPredicted RBP21.56■■□□□ 1.04
TSC22D4-204ENST00000456330 NUTM2EB1AL46 878 aaPredicted RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms