RNA–Protein interactions for RNA: ENST00000454444.1

AC007879.2-201, humanhuman

TSL 4 BASIC

Gene AC007879.2, Length 551 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.2-201ENST00000454444 RPRD2Q5VT52 1461 aaKnown RBP11.96□□□□□ -0.49
AC007879.2-201ENST00000454444 SLAIN2Q9P270 581 aa11.96□□□□□ -0.49
AC007879.2-201ENST00000454444 STRCP1A6NGW2 1772 aa11.96□□□□□ -0.49
AC007879.2-201ENST00000454444 ALKQ9UM73 1620 aa11.96□□□□□ -0.5
AC007879.2-201ENST00000454444 TBX22Q9Y458 520 aa11.95□□□□□ -0.5
AC007879.2-201ENST00000454444 RIMS2Q9UQ26 1411 aa11.94□□□□□ -0.5
AC007879.2-201ENST00000454444 NUTM2DQ5VT03 806 aaPredicted RBP11.94□□□□□ -0.5
AC007879.2-201ENST00000454444 ADGRB3O60242 1522 aa11.94□□□□□ -0.5
AC007879.2-201ENST00000454444 PLEKHG1Q9ULL1 1385 aa11.93□□□□□ -0.5
AC007879.2-201ENST00000454444 ATF3P18847 181 aa11.93□□□□□ -0.5
AC007879.2-201ENST00000454444 KDM5AP29375 1690 aaKnown RBP11.93□□□□□ -0.5
AC007879.2-201ENST00000454444 NUP155O75694 1391 aa11.92□□□□□ -0.5
AC007879.2-201ENST00000454444 NKTRP30414 1462 aaKnown RBP11.92□□□□□ -0.5
AC007879.2-201ENST00000454444 CADPS2Q86UW7 1296 aa11.92□□□□□ -0.5
AC007879.2-201ENST00000454444 ZNF326Q5BKZ1 582 aaKnown RBP11.91□□□□□ -0.5
AC007879.2-201ENST00000454444 ROCK1Q13464 1354 aa11.91□□□□□ -0.5
AC007879.2-201ENST00000454444 TET3O43151 1660 aa11.91□□□□□ -0.5
AC007879.2-201ENST00000454444 MEX3CQ5U5Q3 659 aaKnown RBP11.9□□□□□ -0.5
AC007879.2-201ENST00000454444 PPARGC1BQ86YN6 1023 aaKnown RBP11.9□□□□□ -0.5
AC007879.2-201ENST00000454444 C19orf44Q9H6X5 657 aa11.9□□□□□ -0.5
AC007879.2-201ENST00000454444 RGS17Q9UGC6 210 aaPredicted RBP11.9□□□□□ -0.5
AC007879.2-201ENST00000454444 JCADQ9P266 1359 aa11.89□□□□□ -0.51
AC007879.2-201ENST00000454444 ZFYVE9O95405 1425 aa11.88□□□□□ -0.51
AC007879.2-201ENST00000454444 AMOTL2Q9Y2J4 779 aa11.88□□□□□ -0.51
AC007879.2-201ENST00000454444 NCOA3Q9Y6Q9 1424 aa11.87□□□□□ -0.51
AC007879.2-201ENST00000454444 POTEAQ6S8J7 498 aa11.87□□□□□ -0.51
AC007879.2-201ENST00000454444 PIK3R4Q99570 1358 aa11.86□□□□□ -0.51
AC007879.2-201ENST00000454444 ROBO1Q9Y6N7 1651 aa11.86□□□□□ -0.51
AC007879.2-201ENST00000454444 NWD1Q149M9 1564 aa11.84□□□□□ -0.51
AC007879.2-201ENST00000454444 XIRP1Q702N8 1843 aaKnown RBP11.84□□□□□ -0.51
AC007879.2-201ENST00000454444 ZNF772Q68DY9 489 aaPredicted RBP11.84□□□□□ -0.51
AC007879.2-201ENST00000454444 SPATA31A6Q5VVP1 1343 aa11.84□□□□□ -0.51
AC007879.2-201ENST00000454444 TMEM131LA2VDJ0 1609 aa11.83□□□□□ -0.52
AC007879.2-201ENST00000454444 NUTM2BA6NNL0 878 aaPredicted RBP11.82□□□□□ -0.52
AC007879.2-201ENST00000454444 NUTM2EB1AL46 878 aaPredicted RBP11.82□□□□□ -0.52
AC007879.2-201ENST00000454444 NUTM2AQ8IVF1 878 aaPredicted RBP11.82□□□□□ -0.52
AC007879.2-201ENST00000454444 TRIM52Q96A61 297 aa11.82□□□□□ -0.52
AC007879.2-201ENST00000454444 ADAMTS13Q76LX8 1427 aa11.82□□□□□ -0.52
AC007879.2-201ENST00000454444 UNC13BO14795 1591 aa11.82□□□□□ -0.52
AC007879.2-201ENST00000454444 GCC2Q8IWJ2 1684 aa11.81□□□□□ -0.52
AC007879.2-201ENST00000454444 DIP2AQ14689 1571 aa11.8□□□□□ -0.52
AC007879.2-201ENST00000454444 BRINP3Q76B58 766 aa11.8□□□□□ -0.52
AC007879.2-201ENST00000454444 TRPM2O94759 1503 aa11.8□□□□□ -0.52
AC007879.2-201ENST00000454444 IQGAP3Q86VI3 1631 aa11.79□□□□□ -0.52
AC007879.2-201ENST00000454444 E9PCH4 1651 aa11.79□□□□□ -0.52
AC007879.2-201ENST00000454444 LRRC59Q96AG4 307 aaKnown RBP11.79□□□□□ -0.52
AC007879.2-201ENST00000454444 PHLPP1O60346 1717 aa11.79□□□□□ -0.52
AC007879.2-201ENST00000454444 CHD2O14647 1828 aaKnown RBP11.79□□□□□ -0.52
AC007879.2-201ENST00000454444 VGFO15240 615 aaPredicted RBP11.78□□□□□ -0.52
AC007879.2-201ENST00000454444 RXRBP28702 533 aa11.78□□□□□ -0.52
AC007879.2-201ENST00000454444 MYO5BQ9ULV0 1848 aa11.76□□□□□ -0.53
AC007879.2-201ENST00000454444 DCCP43146 1447 aa11.76□□□□□ -0.53
AC007879.2-201ENST00000454444 PTPRUQ92729 1446 aa11.76□□□□□ -0.53
AC007879.2-201ENST00000454444 SLC4A1APQ9BWU0 796 aaKnown RBP11.75□□□□□ -0.53
AC007879.2-201ENST00000454444 METP08581 1390 aa11.75□□□□□ -0.53
AC007879.2-201ENST00000454444 RPGRIP1LQ68CZ1 1315 aa11.73□□□□□ -0.53
AC007879.2-201ENST00000454444 C8orf37Q96NL8 207 aa11.73□□□□□ -0.53
AC007879.2-201ENST00000454444 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.73□□□□□ -0.53
AC007879.2-201ENST00000454444 COL16A1Q07092 1604 aaPredicted RBP11.72□□□□□ -0.53
AC007879.2-201ENST00000454444 AHDC1Q5TGY3 1603 aaPredicted RBP11.71□□□□□ -0.53
AC007879.2-201ENST00000454444 SETBP1Q9Y6X0 1596 aa11.71□□□□□ -0.53
AC007879.2-201ENST00000454444 AFF2P51816 1311 aa11.71□□□□□ -0.53
AC007879.2-201ENST00000454444 DDX17Q92841 729 aaKnown RBP11.71□□□□□ -0.53
AC007879.2-201ENST00000454444 NGLY1Q96IV0 654 aa11.71□□□□□ -0.53
AC007879.2-201ENST00000454444 QTRT2Q9H974 415 aaKnown RBP11.71□□□□□ -0.53
AC007879.2-201ENST00000454444 LRP6O75581 1613 aa11.71□□□□□ -0.54
AC007879.2-201ENST00000454444 MST1RQ04912 1400 aa11.7□□□□□ -0.54
AC007879.2-201ENST00000454444 ADGRL3Q9HAR2 1447 aa11.7□□□□□ -0.54
AC007879.2-201ENST00000454444 ADAMTS2O95450 1211 aa11.7□□□□□ -0.54
AC007879.2-201ENST00000454444 ASXL1Q8IXJ9 1541 aa11.7□□□□□ -0.54
AC007879.2-201ENST00000454444 NAIPQ13075 1403 aa11.69□□□□□ -0.54
AC007879.2-201ENST00000454444 SETD5Q9C0A6 1442 aa11.69□□□□□ -0.54
AC007879.2-201ENST00000454444 RRBP1Q9P2E9 1410 aaKnown RBP11.69□□□□□ -0.54
AC007879.2-201ENST00000454444 UPF1Q92900 1129 aaKnown RBP eCLIP11.69□□□□□ -0.54
AC007879.2-201ENST00000454444 SPHKAPQ2M3C7 1700 aa11.69□□□□□ -0.54
AC007879.2-201ENST00000454444 RBM6P78332 1123 aaKnown RBP11.68□□□□□ -0.54
AC007879.2-201ENST00000454444 RGL3Q3MIN7 710 aa11.67□□□□□ -0.54
AC007879.2-201ENST00000454444 ESCO1Q5FWF5 840 aa11.67□□□□□ -0.54
AC007879.2-201ENST00000454444 ORAI2Q96SN7 254 aa11.67□□□□□ -0.54
AC007879.2-201ENST00000454444 C1orf167Q5SNV9 1468 aa11.66□□□□□ -0.54
AC007879.2-201ENST00000454444 STK26Q9P289 416 aa11.66□□□□□ -0.54
AC007879.2-201ENST00000454444 PNPLA6Q8IY17 1366 aa11.66□□□□□ -0.54
AC007879.2-201ENST00000454444 NEXMIFQ5QGS0 1516 aa11.65□□□□□ -0.54
AC007879.2-201ENST00000454444 SHPRHQ149N8 1683 aa11.65□□□□□ -0.54
AC007879.2-201ENST00000454444 CLTCL1P53675 1640 aa11.65□□□□□ -0.54
AC007879.2-201ENST00000454444 FOXD1Q16676 465 aa11.65□□□□□ -0.54
AC007879.2-201ENST00000454444 USP21Q9UK80 565 aa11.65□□□□□ -0.54
AC007879.2-201ENST00000454444 HFM1A2PYH4 1435 aa11.65□□□□□ -0.54
AC007879.2-201ENST00000454444 PTCH1Q13635 1447 aa11.65□□□□□ -0.54
AC007879.2-201ENST00000454444 XRN1Q8IZH2 1706 aaKnown RBP11.65□□□□□ -0.54
AC007879.2-201ENST00000454444 ROBO2Q9HCK4 1378 aa11.65□□□□□ -0.55
AC007879.2-201ENST00000454444 NRXN3Q9Y4C0 1643 aa11.64□□□□□ -0.55
AC007879.2-201ENST00000454444 NPHP3Q7Z494 1330 aa11.63□□□□□ -0.55
AC007879.2-201ENST00000454444 CCDC144AA2RUR9 1427 aa11.63□□□□□ -0.55
AC007879.2-201ENST00000454444 TRPC5Q9UL62 973 aaPredicted RBP11.63□□□□□ -0.55
AC007879.2-201ENST00000454444 LRPPRCP42704 1394 aaKnown RBP11.63□□□□□ -0.55
AC007879.2-201ENST00000454444 CDK12Q9NYV4 1490 aaPredicted RBP11.63□□□□□ -0.55
AC007879.2-201ENST00000454444 KIF1BO60333 1816 aa11.63□□□□□ -0.55
AC007879.2-201ENST00000454444 SOS2Q07890 1332 aaPredicted RBP11.62□□□□□ -0.55
AC007879.2-201ENST00000454444 NUTM2FA1L443 756 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms